Paper · 2010 · The Plant Pathology Journal

Effect of Phytohormones and Chemical Inhibitors on Pathogenesis-related Genes Identified by Differential Hybridization in Rice Suspension Culture Cells

Sang-Gon Kim; Jing-Ni Wu; Yiming Wang; et al.

14
claims
28
verbatim quotes
5
citations
3
research areas
✓
Open access · cc-by-nc

Abstract

In order to study disease resistance mechanisms in rice against the rice blast fungus Magnaporthe grisea, we screened fungal elicitor-responsive genes from rice suspension-cultured cells treated with fungal elicitors employing differential hybridization (DH). By DH screening, 31 distinct rice clones were isolated and a majority of them were full-length cDNAs encoding pathogenesisrelated (PR) genes. Sixteen of the 31 genes were upregulated at 4, 8, and 12 h following fungal elicitor treatment. To elucidate the effect of signal molecules and biotic elicitors on the regulation of rice defense genes, we further characterized the transcriptional expression patterns of representative isolated PR genes; OsGlu1, OsGlu2, OsTLP, OsRLK, and OsPR-10, following treatment with fungal elicitor, phytohormones, cycloheximide, and inhibitors of protein phosphorylation. Jasmonic acid (JA) induced transcriptional expression of OsGlu1, OsTLP, and OsRLK, but not of OsGlu2 and OsPR-10 at any of the tested time points. Salicylic acid (SA) and abscisic acid weakly induced the expression of OsTLP and OsRLK. SA showed an antagonistic effect with fungal elicitor and JA. Cycloheximide suppressed all these genes upon elicitor treatment, except for OsGlu2. Staurosporine only induced the expression of OsRLK. Application of calyculin A strongly induced OsRLK expression, but suppressed the expression of OsGlu2. Our study yielded a number of PR genes that play a role in defense mechanisms against the rice blast fungus, as well as contribute towards the elucidation of crosstalk between phytohormones and other modifications during defense signaling.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 14

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Differential hybridization isolated 31 distinct rice clones, most encoding full-length PR gene cDNAs.

Outcome
distinct rice clonese0
Value
31e0
Qualifier
a majority of them were full-length cDNAs encoding pathogenesisrelated (PR) genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“By DH screening, 31 distinct rice clones were isolated and a majority of them were full-length cDNAs encoding pathogenesisrelated (PR) genes.”

✓ located verbatim in the source · abstract, characters 260–401 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Sixteen genes were upregulated at 4, 8 and 12 hours after fungal elicitor treatment.

Treatment
fungal elicitor treatmente0
Outcome
genese0
Direction
upregulatede0
Value
Sixteene0
Qualifier
at 4, 8, and 12 he0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Sixteen of the 31 genes were upregulated at 4, 8, and 12 h following fungal elicitor treatment.”

✓ located verbatim in the source · abstract, characters 402–497 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Jasmonic acid induced OsGlu1, OsTLP and OsRLK transcription.

Treatment
Jasmonic acid (JA)e0
Gene
OsGlu1, OsTLP, and OsRLKe0
Outcome
transcriptional expressione0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Jasmonic acid (JA) induced transcriptional expression of OsGlu1, OsTLP, and OsRLK, but not of OsGlu2 and OsPR-10 at any of the tested time points.”

✓ located verbatim in the source · abstract, characters 864–1010 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Jasmonic acid did not induce OsGlu2 or OsPR-10 at tested times.

Treatment
Jasmonic acid (JA)e0
Gene
OsGlu2 and OsPR-10e0
Outcome
transcriptional expressione0
Direction
note0
Qualifier
at any of the tested time pointse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Jasmonic acid (JA) induced transcriptional expression of OsGlu1, OsTLP, and OsRLK, but not of OsGlu2 and OsPR-10 at any of the tested time points.”

✓ located verbatim in the source · abstract, characters 864–1010 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Salicylic acid weakly induced OsTLP and OsRLK expression.

Treatment
Salicylic acid (SA)e0
Gene
OsTLP and OsRLKe0
Outcome
expressione0
Direction
weakly inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Salicylic acid (SA) and abscisic acid weakly induced the expression of OsTLP and OsRLK.”

✓ located verbatim in the source · abstract, characters 1011–1098 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Abscisic acid weakly induced OsTLP and OsRLK expression.

Treatment
abscisic acide0
Gene
OsTLP and OsRLKe0
Outcome
expressione0
Direction
weakly inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Salicylic acid (SA) and abscisic acid weakly induced the expression of OsTLP and OsRLK.”

✓ located verbatim in the source · abstract, characters 1011–1098 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

SA antagonized fungal elicitor effects.

Treatment
SAe0
Outcome
antagonistic effecte0
Direction
antagonistice0
Qualifier
fungal elicitore0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“SA showed an antagonistic effect with fungal elicitor and JA.”

✓ located verbatim in the source · abstract, characters 1099–1160 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

SA antagonized JA effects.

Treatment
SAe0
Outcome
antagonistic effecte0
Direction
antagonistice0
Qualifier
JAe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“SA showed an antagonistic effect with fungal elicitor and JA.”

✓ located verbatim in the source · abstract, characters 1099–1160 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Cycloheximide suppressed elicitor-induced OsGlu1, OsTLP and OsRLK.

Treatment
Cycloheximidee0
Gene
OsGlu1e1
Outcome
genese0
Direction
suppressede0
Qualifier
upon elicitor treatment, except for OsGlu2e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Cycloheximide suppressed all these genes upon elicitor treatment, except for OsGlu2.”

✓ located verbatim in the source · abstract, characters 1161–1245 · show in text ↑
e1

“OsGlu1, OsGlu2, OsTLP, OsRLK, and OsPR-10”

✓ located verbatim in the source · abstract, characters 706–747 · show in text ↑
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

Cycloheximide also suppressed elicitor-induced OsPR-10; OsGlu2 was excepted from suppression.

Treatment
Cycloheximidee0
Gene
OsPR-10e1
Outcome
genese0
Direction
suppressede0
Qualifier
except for OsGlu2e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Cycloheximide suppressed all these genes upon elicitor treatment, except for OsGlu2.”

✓ located verbatim in the source · abstract, characters 1161–1245 · show in text ↑
e1

“OsGlu1, OsGlu2, OsTLP, OsRLK, and OsPR-10”

✓ located verbatim in the source · abstract, characters 706–747 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Staurosporine induced only OsRLK expression.

Treatment
Staurosporinee0
Gene
OsRLKe0
Outcome
expressione0
Direction
inducede0
Qualifier
onlye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Staurosporine only induced the expression of OsRLK.”

✓ located verbatim in the source · abstract, characters 1246–1297 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Calyculin A strongly induced OsRLK expression.

Treatment
calyculin Ae0
Gene
OsRLKe0
Outcome
expressione0
Direction
strongly inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Application of calyculin A strongly induced OsRLK expression, but suppressed the expression of OsGlu2.”

✓ located verbatim in the source · abstract, characters 1298–1400 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Calyculin A suppressed OsGlu2 expression.

Treatment
calyculin Ae0
Gene
OsGlu2e0
Outcome
expressione0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Rice”

✓ located verbatim in the source · title, characters 122–126 · show in text ↑
e0

“Application of calyculin A strongly induced OsRLK expression, but suppressed the expression of OsGlu2.”

✓ located verbatim in the source · abstract, characters 1298–1400 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The isolated PR genes are interpreted as contributing to rice blast defense mechanisms.

Interactor
rice blast fungusPyricularia oryzaee0pathogen
Gene
PR genese0
Outcome
defense mechanismse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Pyricularia oryzae
Pyricularia oryzae · InteractorJie-Hao Ou · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“Our study yielded a number of PR genes that play a role in defense mechanisms against the rice blast fungus, as well as contribute towards the elucidation of crosstalk between phytohormones and other modifications during defense signaling.”

✓ located verbatim in the source · abstract, characters 1401–1640 · show in text ↑

staurosporine · molecular: expression · Oryza sativa (rice)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
See all 3 papers →

jasmonic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

29 papers: 24 positive, 5 negative or no effect

23 papers in the same direction as this paper · 5 in the opposite direction

  1. no effect
  2. negative
  3. no effect

25 papers more in this group

See all 29 papers →

salicylic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

31 papers: 28 positive, 3 negative or no effect

27 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

27 papers more in this group

See all 31 papers →

cycloheximide · molecular: expression · Oryza sativa (rice)Results agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. no effect
  2. negative
See all 3 papers →

resistance inducer · molecular: expression · Oryza sativa (rice)Positive and negative results

17 papers: 15 positive, 2 negative or no effect

14 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

13 papers more in this group

See all 17 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.