Paper · 2003 · Physiologia Plantarum

Oxygen concentration regulates alternative oxidase expression in barley roots during hypoxia and post‐hypoxia

Bożena Szal; Yves Jolivet; Marie‐Paule Hasenfratz‐Sauder; et al.

12
claims
24
verbatim quotes
52
citations
2
research areas
—
Not open access

Abstract

During flooding, when roots are submerged in oxygen‐free water, root tissue becomes hypoxic and its metabolism is characterized by fermentation processes and limited respiratory activity. After returning to aerobic conditions (post‐hypoxic period) high respiration rates together with symptoms of oxidative stress are observed. Plant mitochondria have two terminal oxidases: a cytochrome oxidase with high affinity to oxygen and an alternative (cyanide resistant) oxidase (AOX) with a relatively low oxygen affinity. We compared mitochondrial respiration and AOX expression immediately after hypoxic and during post‐hypoxic period. Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings were transferred for 5 days to Knop nutrient medium flushed with air (control) or nitrogen (hypoxia) and after returned for 24 h to aerated nutrient medium (post‐hypoxia). NADH/NAD + + NADH and UQH 2 /UQ total ratios increased in hypoxia‐treated roots. After the hypoxic roots were returned to aerated medium, increases in respiration rate and ATP concentration were observed. Mitochondria isolated from barley roots at the end of hypoxic period exhibited high respiratory rates as compared to mitochondria from control and post‐hypoxic roots. Control root mitochondria expressed high AOX capacity in the presence of pyruvate and DTT. Mitochondria isolated at the end of the hypoxic period were highly cyanide sensitive under AOX‐activating conditions, however, after 24 h of post‐hypoxia, AOX capacity was comparable to that observed in the control. The capacity of AOX was correlated with the amount of AOX protein determined by Western blotting. Faint or no bands were observed immediately after hypoxia with the AOX protein appearing again during the post‐hypoxic period. Examination of AOX transcript levels showed no significant differences between control, hypoxic and post‐hypoxic roots indicating that the regulation of AOX expression by oxygen availability in barley roots may take place at the translation level.

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Claims 12

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Hypoxia increased NADH and UQH2 ratios in barley roots.

Organ / stage
rootse0
Treatment
hypoxiae0
Outcome
NADH/NAD + + NADH and UQH 2 /UQ total ratiose0e1
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“NADH/NAD + + NADH and UQH 2 /UQ total ratios increased in hypoxia‐treated roots”

✓ located verbatim in the source · abstract, characters 866–945 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Returning hypoxic roots to aerated medium increased respiration rate.

Organ / stage
rootse0
Treatment
returned to aerated mediume0
Outcome
respiration ratee0e1
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“After the hypoxic roots were returned to aerated medium, increases in respiration rate and ATP concentration were observed”

✓ located verbatim in the source · abstract, characters 947–1069 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Returning hypoxic roots to aerated medium increased ATP concentration.

Organ / stage
rootse0
Treatment
returned to aerated mediume0
Outcome
ATP concentratione0e1
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“After the hypoxic roots were returned to aerated medium, increases in respiration rate and ATP concentration were observed”

✓ located verbatim in the source · abstract, characters 947–1069 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mitochondria isolated after hypoxia had higher respiratory rates than control and recovered mitochondria.

Organ / stage
rootse0
Outcome
respiratory ratese0e1
Direction
highe0
Comparator
control and post‐hypoxic rootse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Mitochondria isolated from barley roots at the end of hypoxic period exhibited high respiratory rates as compared to mitochondria from control and post‐hypoxic roots”

✓ located verbatim in the source · abstract, characters 1071–1236 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Control root mitochondria showed high AOX capacity with pyruvate and DTT.

Organ / stage
roote0
Gene
AOXe0
Outcome
AOX capacitye0e1
Direction
highe0
Qualifier
in the presence of pyruvate and DTTe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Control root mitochondria expressed high AOX capacity in the presence of pyruvate and DTT”

✓ located verbatim in the source · abstract, characters 1238–1327 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mitochondria after hypoxia were highly cyanide sensitive under AOX-activating conditions.

Gene
AOXe0
Outcome
cyanide sensitivee0e1
Direction
highlye0
Qualifier
at the end of the hypoxic periode0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Mitochondria isolated at the end of the hypoxic period were highly cyanide sensitive under AOX‐activating conditions”

✓ located verbatim in the source · abstract, characters 1329–1445 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AOX capacity after 24 hours of recovery was comparable to control.

Gene
AOXe0
Outcome
AOX capacitye0e1
Direction
comparablee0
Qualifier
after 24 h of post‐hypoxiae0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“after 24 h of post‐hypoxia, AOX capacity was comparable to that observed in the control”

✓ located verbatim in the source · abstract, characters 1456–1543 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

AOX capacity correlated with AOX protein abundance.

Gene
AOXe0
Outcome
capacity of AOXe0e1
Direction
correlatede0
Qualifier
amount of AOX proteine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The capacity of AOX was correlated with the amount of AOX protein determined by Western blotting”

✓ located verbatim in the source · abstract, characters 1545–1641 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AOX protein bands were faint or absent immediately after hypoxia.

Gene
AOXe0
Outcome
Faint or no bandse0e1
Qualifier
immediately after hypoxiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Faint or no bands were observed immediately after hypoxia with the AOX protein appearing again during the post‐hypoxic period”

✓ located verbatim in the source · abstract, characters 1643–1768 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AOX protein reappeared during the post-hypoxic period.

Gene
AOXe0
Outcome
AOX protein appearing againe0e1
Qualifier
during the post‐hypoxic periode0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“AOX protein appearing again during the post‐hypoxic period”

✓ located verbatim in the source · abstract, characters 1710–1768 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

AOX transcript levels did not differ significantly between control, hypoxic and recovered roots.

Gene
AOXe0
Outcome
AOX transcript levelse0e1
Direction
no significant differencese0
Comparator
control, hypoxic and post‐hypoxic rootse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“AOX transcript levels showed no significant differences between control, hypoxic and post‐hypoxic roots”

✓ located verbatim in the source · abstract, characters 1785–1888 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Authors inferred oxygen regulation of AOX expression may occur at translation.

Gene
AOXe0
Outcome
AOX expressione0e1
Qualifier
at the translation levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“regulation of AOX expression by oxygen availability in barley roots may take place at the translation level”

✓ located verbatim in the source · abstract, characters 1909–2016 · show in text ↑
e1

“Four‐day‐old barley ( Hordeum vulgare L. cv Gregor) seedlings”

✓ located verbatim in the source · abstract, characters 632–693 · show in text ↑

in vitro · molecular: metabolites · Hordeum vulgare (barley)Positive and negative results

9 papers: 6 positive, 3 negative or no effect

5 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

5 papers more in this group

See all 9 papers →

flooding · molecular: metabolites · Hordeum vulgare (barley)Positive and negative results

12 papers: 4 positive, 8 negative or no effect

7 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

8 papers more in this group

See all 12 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.