Paper · 2011 · Journal of Zhejiang University SCIENCE B

Proteomic analysis of seed germination under salt stress in soybeans

Xiao-yan Xu; Rui Fan; Rui Zheng; et al.

19
claims
46
verbatim quotes
77
citations
4
research areas
✓
Open access

Abstract

Soybean (Glycine max (L.) Merrill) is a salt-sensitive crop, and its production is severely affected by saline soils. Therefore, the response of soybean seeds to salt stress during germination was investigated at both physiological and proteomic levels. The salt-tolerant cultivar Lee68 and salt-sensitive cultivar N2899 were exposed to 100 mmol/L NaCl until radicle protrusion from the seed coat. In both cultivars, the final germination percentage was not affected by salt, but the mean germination times of Lee68 and N2899 were delayed by 0.3 and 1.0 d, respectively, compared with controls. In response to salt stress, the abscisic acid content increased, and gibberellic acid (GA₁+₃) and isopentenyladenosine decreased. Indole-3-acetic acid increased in Lee68, but remained unchanged in N2899. The proteins extracted from germinated seeds were separated using two-dimensional gel electrophoresis (2-DE), followed by Coomassie brilliant blue G-250 staining. About 350 protein spots from 2-DE gels of pH range 3 to 10 and 650 spots from gels of pH range 4 to 7 were reproducibly resolved, of which 18 protein spots showed changes in abundance as a result of salt stress in both cultivars. After matrix-assisted laser desorption ionization-time of flight-mass spectroscopy (MALDI-TOF-MS) analysis of the differentially expressed proteins, the peptide mass fingerprint was searched against the soybean UniGene database and nine proteins were successfully identified. Ferritin and 20S proteasome subunit β-6 were up-regulated in both cultivars. Glyceraldehyde 3-phosphate dehydrogenase, glutathione S-transferase (GST) 9, GST 10, and seed maturation protein PM36 were down-regulated in Lee68 by salt, but still remained at a certain level. However, these proteins were present in lower levels in control N2899 and were up-regulated under salt stress. The results indicate that these proteins might have important roles in defense mechanisms against salt stress during soybean seed germination.

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Claims 19

Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Salt did not affect final germination percentage in Lee68.

Taxon
soybeansGlycine maxt0
Material
Lee68e1
Treatment
100 mmol/L NaCle1
Outcome
final germination percentagee0
Direction
not affectede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“In both cultivars, the final germination percentage was not affected by salt”

✓ located verbatim in the source · abstract, characters 398–474 · show in text ↑
e1

“The salt-tolerant cultivar Lee68 and salt-sensitive cultivar N2899 were exposed to 100 mmol/L NaCl until radicle protrusion from the seed coat.”

✓ located verbatim in the source · abstract, characters 254–397 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Salt did not affect final germination percentage in N2899.

Taxon
soybeansGlycine maxt0
Material
N2899e1
Treatment
100 mmol/L NaCle1
Outcome
final germination percentagee0
Direction
not affectede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“In both cultivars, the final germination percentage was not affected by salt”

✓ located verbatim in the source · abstract, characters 398–474 · show in text ↑
e1

“The salt-tolerant cultivar Lee68 and salt-sensitive cultivar N2899 were exposed to 100 mmol/L NaCl until radicle protrusion from the seed coat.”

✓ located verbatim in the source · abstract, characters 254–397 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salt delayed mean germination time in Lee68 by 0.3 d relative to controls.

Taxon
soybeansGlycine maxt0
Material
Lee68e0
Treatment
100 mmol/L NaCle1
Outcome
mean germination timese0
Direction
delayede0
Value
0.3e0
Comparator
controlse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“the mean germination times of Lee68 and N2899 were delayed by 0.3 and 1.0 d, respectively, compared with controls.”

✓ located verbatim in the source · abstract, characters 480–594 · show in text ↑
e1

“The salt-tolerant cultivar Lee68 and salt-sensitive cultivar N2899 were exposed to 100 mmol/L NaCl until radicle protrusion from the seed coat.”

✓ located verbatim in the source · abstract, characters 254–397 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salt delayed mean germination time in N2899 by 1.0 d relative to controls.

Taxon
soybeansGlycine maxt0
Material
N2899e0
Treatment
100 mmol/L NaCle1
Outcome
mean germination timese0
Direction
delayede0
Value
1.0 de0
Comparator
controlse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“the mean germination times of Lee68 and N2899 were delayed by 0.3 and 1.0 d, respectively, compared with controls.”

✓ located verbatim in the source · abstract, characters 480–594 · show in text ↑
e1

“The salt-tolerant cultivar Lee68 and salt-sensitive cultivar N2899 were exposed to 100 mmol/L NaCl until radicle protrusion from the seed coat.”

✓ located verbatim in the source · abstract, characters 254–397 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt stress increased soybean abscisic acid content.

Taxon
soybeansGlycine maxt0
Treatment
salt stresse0
Outcome
abscisic acid contente0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“In response to salt stress, the abscisic acid content increased, and gibberellic acid (GA₁+₃) and isopentenyladenosine decreased.”

✓ located verbatim in the source · abstract, characters 595–724 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt stress decreased soybean gibberellic acid and isopentenyladenosine.

Taxon
soybeansGlycine maxt0
Treatment
salt stresse0
Outcome
gibberellic acid (GA₁+₃) and isopentenyladenosinee0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“In response to salt stress, the abscisic acid content increased, and gibberellic acid (GA₁+₃) and isopentenyladenosine decreased.”

✓ located verbatim in the source · abstract, characters 595–724 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Indole-3-acetic acid increased in salt-treated Lee68.

Taxon
soybeansGlycine maxt0
Material
Lee68e0
Treatment
salt stresse1
Outcome
Indole-3-acetic acide0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Indole-3-acetic acid increased in Lee68, but remained unchanged in N2899.”

✓ located verbatim in the source · abstract, characters 725–798 · show in text ↑
e1

“In response to salt stress”

✓ located verbatim in the source · abstract, characters 595–621 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Indole-3-acetic acid remained unchanged in salt-treated N2899.

Taxon
soybeansGlycine maxt0
Material
N2899e0
Treatment
salt stresse1
Outcome
Indole-3-acetic acide0
Direction
remained unchangede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Indole-3-acetic acid increased in Lee68, but remained unchanged in N2899.”

✓ located verbatim in the source · abstract, characters 725–798 · show in text ↑
e1

“In response to salt stress”

✓ located verbatim in the source · abstract, characters 595–621 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

About 350 soybean protein spots were reproducibly resolved in gels spanning pH 3 to 10.

Taxon
soybeansGlycine maxt0
Outcome
protein spotse0
Value
About 350e0
Qualifier
pH range 3 to 10e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“About 350 protein spots from 2-DE gels of pH range 3 to 10 and 650 spots from gels of pH range 4 to 7 were reproducibly resolved”

✓ located verbatim in the source · abstract, characters 962–1090 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

650 soybean protein spots were reproducibly resolved in gels spanning pH 4 to 7.

Taxon
soybeansGlycine maxt0
Outcome
spotse0
Value
650e0
Qualifier
pH range 4 to 7e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“About 350 protein spots from 2-DE gels of pH range 3 to 10 and 650 spots from gels of pH range 4 to 7 were reproducibly resolved”

✓ located verbatim in the source · abstract, characters 962–1090 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Eighteen protein spots changed abundance with salt stress in both soybean cultivars.

Taxon
soybeansGlycine maxt0
Treatment
salt stresse0
Outcome
protein spots showed changes in abundancee0
Value
18e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“18 protein spots showed changes in abundance as a result of salt stress in both cultivars.”

✓ located verbatim in the source · abstract, characters 1101–1191 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Nine differentially expressed soybean proteins were successfully identified.

Taxon
soybeanGlycine maxe0
Outcome
proteins were successfully identifiede0
Value
ninee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“After matrix-assisted laser desorption ionization-time of flight-mass spectroscopy (MALDI-TOF-MS) analysis of the differentially expressed proteins, the peptide mass fingerprint was searched against the soybean UniGene database and nine proteins were successfully identified.”

✓ located verbatim in the source · abstract, characters 1192–1467 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ferritin and 20S proteasome subunit β-6 were up-regulated in Lee68 under salt stress.

Taxon
soybeansGlycine maxt0
Material
Lee68e1
Treatment
100 mmol/L NaCle1
Outcome
Ferritin and 20S proteasome subunit β-6e0
Direction
up-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Ferritin and 20S proteasome subunit β-6 were up-regulated in both cultivars.”

✓ located verbatim in the source · abstract, characters 1468–1544 · show in text ↑
e1

“The salt-tolerant cultivar Lee68 and salt-sensitive cultivar N2899 were exposed to 100 mmol/L NaCl until radicle protrusion from the seed coat.”

✓ located verbatim in the source · abstract, characters 254–397 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ferritin and 20S proteasome subunit β-6 were up-regulated in N2899 under salt stress.

Taxon
soybeansGlycine maxt0
Material
N2899e1
Treatment
100 mmol/L NaCle1
Outcome
Ferritin and 20S proteasome subunit β-6e0
Direction
up-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Ferritin and 20S proteasome subunit β-6 were up-regulated in both cultivars.”

✓ located verbatim in the source · abstract, characters 1468–1544 · show in text ↑
e1

“The salt-tolerant cultivar Lee68 and salt-sensitive cultivar N2899 were exposed to 100 mmol/L NaCl until radicle protrusion from the seed coat.”

✓ located verbatim in the source · abstract, characters 254–397 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt down-regulated glyceraldehyde 3-phosphate dehydrogenase, GST 9 and GST 10 in Lee68, with residual levels remaining.

Taxon
soybeansGlycine maxt0
Material
Lee68e0
Treatment
salte0
Outcome
Glyceraldehyde 3-phosphate dehydrogenase, glutathione S-transferase (GST) 9, GST 10e0
Direction
down-regulatede0
Qualifier
still remained at a certain levele0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Glyceraldehyde 3-phosphate dehydrogenase, glutathione S-transferase (GST) 9, GST 10, and seed maturation protein PM36 were down-regulated in Lee68 by salt, but still remained at a certain level.”

✓ located verbatim in the source · abstract, characters 1545–1739 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt down-regulated seed maturation protein PM36 in Lee68, with a residual level remaining.

Taxon
soybeansGlycine maxt0
Material
Lee68e0
Treatment
salte0
Outcome
seed maturation protein PM36e0
Direction
down-regulatede0
Qualifier
still remained at a certain levele0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Glyceraldehyde 3-phosphate dehydrogenase, glutathione S-transferase (GST) 9, GST 10, and seed maturation protein PM36 were down-regulated in Lee68 by salt, but still remained at a certain level.”

✓ located verbatim in the source · abstract, characters 1545–1739 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Control N2899 had lower levels of glyceraldehyde 3-phosphate dehydrogenase, GST 9 and GST 10, which increased under salt stress.

Taxon
soybeansGlycine maxt0
Material
N2899e0
Treatment
salt stresse0
Outcome
Glyceraldehyde 3-phosphate dehydrogenase, glutathione S-transferase (GST) 9, GST 10e1
Direction
up-regulatede0
Qualifier
present in lower levels in control N2899e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“However, these proteins were present in lower levels in control N2899 and were up-regulated under salt stress.”

✓ located verbatim in the source · abstract, characters 1740–1850 · show in text ↑
e1

“Glyceraldehyde 3-phosphate dehydrogenase, glutathione S-transferase (GST) 9, GST 10, and seed maturation protein PM36 were down-regulated in Lee68 by salt, but still remained at a certain level.”

✓ located verbatim in the source · abstract, characters 1545–1739 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Control N2899 had lower seed maturation protein PM36 levels, which increased under salt stress.

Taxon
soybeansGlycine maxt0
Material
N2899e0
Treatment
salt stresse0
Outcome
seed maturation protein PM36e1
Direction
up-regulatede0
Qualifier
present in lower levels in control N2899e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“However, these proteins were present in lower levels in control N2899 and were up-regulated under salt stress.”

✓ located verbatim in the source · abstract, characters 1740–1850 · show in text ↑
e1

“Glyceraldehyde 3-phosphate dehydrogenase, glutathione S-transferase (GST) 9, GST 10, and seed maturation protein PM36 were down-regulated in Lee68 by salt, but still remained at a certain level.”

✓ located verbatim in the source · abstract, characters 1545–1739 · show in text ↑
t0

“soybeans”

✓ located verbatim in the source · title, characters 60–68 · show in text ↑
Mechanismhypothesisoriginal resultpositivebasis n/a

Claim · model-written summary

The identified proteins might contribute to defense against salt stress during soybean germination.

Taxon
soybeanGlycine maxe0
Outcome
defense mechanisms against salt stresse0
Qualifier
these proteins might have important rolese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“The results indicate that these proteins might have important roles in defense mechanisms against salt stress during soybean seed germination.”

✓ located verbatim in the source · abstract, characters 1851–1993 · show in text ↑

sodium chloride · growth · Glycine max (soybean)Results differ

58 papers: 11 positive, 47 negative or no effect

46 papers in the same direction as this paper · 11 in the opposite direction

  1. negative
  2. positive
  3. positive

54 papers more in this group

See all 58 papers →

salinity · physiology: hormones · Glycine max (soybean)Positive and negative results

4 papers: 1 positive, 3 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. negative
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.