Paper · 2012 · Physiologia Plantarum

Association of specific pectin methylesterases with Al‐induced root elongation inhibition in rice

Xiao Ying Yang; Zhang Hui Zeng; Jing Ying Yan; et al.

11
claims
23
verbatim quotes
97
citations
2
research areas
—
Not open access

Abstract

The negative charges of cell wall pectin molecules attributed by pectin methylesterase (PME, EC 3.1.1.11) contribute to Al binding capacity. We examined the expression profiles of 35 members of the PME gene family in the root apex of an Al-sensitive rice 'Zhefu802' under Al stress. While root elongation was inhibited by 40% after 3-h exposure to 25 µM Al, cell wall PME activity and the abundance of eight PME genes transcripts were increased. The same Al treatment which had almost no effect on root elongation of an Al-resistant rice ssp. japonica 'Nipponbare' did not change the expression patterns of these eight PME genes. However, when Al concentration was increased to 50 µM, by which the root elongation of 'Nipponbare' was inhibited by 40% too, the expression of these PME genes were also upregulated except two genes with no signal. These suggest a possible correlation between the upregulated genes and Al-induced inhibition of root elongation in rice. Furthermore, these eight PME genes behaved differently when subjected to CdCl2 and LaCl3 treatments, implying the specificity of different PME genes in response to different metal toxicities. The transgenic rice overexpressing one of these eight PME genes OsPME14 showed higher PME activity and Al content in root tip cell wall, and became more sensitive to Al stress, verifying the involvement of the specific PME gene in Al toxicity. Therefore, our results provided the molecular evidence to connect the expression of specific PME genes with the Al-induced inhibition of root elongation in rice.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

25 µM Al for three hours inhibited Zhefu802 root elongation by 40%.

Material
Zhefu802e1
Treatment
25 µM Ale0
Outcome
root elongatione0
Direction
inhibitede0
Value
40%e0
Qualifier
3-h exposuree0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“While root elongation was inhibited by 40% after 3-h exposure to 25 µM Al”

✓ located verbatim in the source · abstract, characters 283–356 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 93–97 · show in text ↑
e1

“an Al-sensitive rice 'Zhefu802' under Al stress”

✓ located verbatim in the source · abstract, characters 234–281 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

25 µM Al increased root cell wall PME activity in Zhefu802.

Material
Zhefu802e1
Treatment
25 µM Ale1
Gene
PMEe0
Outcome
cell wall PME activitye0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“cell wall PME activity and the abundance of eight PME genes transcripts were increased.”

✓ located verbatim in the source · abstract, characters 358–445 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 93–97 · show in text ↑
e1

“an Al-sensitive rice 'Zhefu802' under Al stress. While root elongation was inhibited by 40% after 3-h exposure to 25 µM Al”

✓ located verbatim in the source · abstract, characters 234–356 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

25 µM Al increased transcript abundance of eight PME genes in Zhefu802.

Material
Zhefu802e1
Treatment
25 µM Ale1
Gene
PMEe0
Outcome
abundance of eight PME genes transcriptse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“cell wall PME activity and the abundance of eight PME genes transcripts were increased.”

✓ located verbatim in the source · abstract, characters 358–445 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 93–97 · show in text ↑
e1

“an Al-sensitive rice 'Zhefu802' under Al stress. While root elongation was inhibited by 40% after 3-h exposure to 25 µM Al”

✓ located verbatim in the source · abstract, characters 234–356 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

25 µM Al had almost no effect on Nipponbare root elongation.

Material
Nipponbaree0
Treatment
Al treatmente0
Outcome
root elongatione0
Direction
almost no effecte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The same Al treatment which had almost no effect on root elongation of an Al-resistant rice ssp. japonica 'Nipponbare'”

✓ located verbatim in the source · abstract, characters 446–564 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

25 µM Al did not alter expression patterns of the eight PME genes in Nipponbare.

Material
Nipponbaree1
Treatment
Al treatmente1
Gene
PMEe0
Outcome
expression patternse0
Direction
did not changee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“did not change the expression patterns of these eight PME genes.”

✓ located verbatim in the source · abstract, characters 565–629 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 93–97 · show in text ↑
e1

“The same Al treatment which had almost no effect on root elongation of an Al-resistant rice ssp. japonica 'Nipponbare'”

✓ located verbatim in the source · abstract, characters 446–564 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

50 µM Al inhibited Nipponbare root elongation by 40%.

Material
Nipponbaree0
Treatment
50 µMe0
Outcome
root elongatione0
Direction
inhibitede0
Value
40%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“when Al concentration was increased to 50 µM, by which the root elongation of 'Nipponbare' was inhibited by 40% too”

✓ located verbatim in the source · abstract, characters 639–754 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 93–97 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

At 50 µM Al, the PME genes in Nipponbare were upregulated except for two genes without signal.

Material
Nipponbaree1
Treatment
50 µMe1
Gene
PMEe0
Outcome
expression of these PME genese0
Direction
upregulatede0
Qualifier
except two genes with no signale0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the expression of these PME genes were also upregulated except two genes with no signal.”

✓ located verbatim in the source · abstract, characters 756–844 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 93–97 · show in text ↑
e1

“when Al concentration was increased to 50 µM, by which the root elongation of 'Nipponbare' was inhibited by 40% too”

✓ located verbatim in the source · abstract, characters 639–754 · show in text ↑
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

Eight PME genes responded differently to CdCl2 and LaCl3 treatments.

Treatment
CdCl2 and LaCl3 treatmentse0
Gene
PMEe0
Outcome
eight PME genese0
Direction
differentlye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“these eight PME genes behaved differently when subjected to CdCl2 and LaCl3 treatments”

✓ located verbatim in the source · abstract, characters 979–1065 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 93–97 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsPME14 overexpression increased rice root tip cell wall PME activity.

Organ / stage
root tip cell walle0
Treatment
overexpressinge0
Gene
OsPME14e0
Outcome
PME activitye0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The transgenic rice overexpressing one of these eight PME genes OsPME14 showed higher PME activity and Al content in root tip cell wall, and became more sensitive to Al stress”

✓ located verbatim in the source · abstract, characters 1158–1333 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsPME14 overexpression increased Al content in rice root tip cell wall.

Organ / stage
root tip cell walle0
Treatment
overexpressinge0
Gene
OsPME14e0
Outcome
Al contente0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The transgenic rice overexpressing one of these eight PME genes OsPME14 showed higher PME activity and Al content in root tip cell wall, and became more sensitive to Al stress”

✓ located verbatim in the source · abstract, characters 1158–1333 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsPME14 overexpression made rice more sensitive to Al stress.

Treatment
overexpressinge0
Gene
OsPME14e0
Outcome
sensitive to Al stresse0
Direction
more sensitivee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The transgenic rice overexpressing one of these eight PME genes OsPME14 showed higher PME activity and Al content in root tip cell wall, and became more sensitive to Al stress”

✓ located verbatim in the source · abstract, characters 1158–1333 · show in text ↑

aluminium atom · growth · Oryza sativa (rice)Results differ

53 papers: 16 positive, 37 negative or no effect

36 papers in the same direction as this paper · 16 in the opposite direction

  1. negative
  2. positive
  3. positive

49 papers more in this group

See all 53 papers →

aluminium atom · cytology · Oryza sativa (rice)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

aluminium atom · molecular: expression · Oryza sativa (rice)Positive and negative results

14 papers: 8 positive, 6 negative or no effect

5 papers in the same direction as this paper · 8 in the opposite direction

  1. positive
  2. positive
  3. positive

10 papers more in this group

See all 14 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.