Paper · 2014 · Journal of Experimental Botany

A 13-lipoxygenase, TomloxC, is essential for synthesis of C5 flavour volatiles in tomato

Jiyuan Shen; Denise Tieman; Jeffrey B. Jones; et al.

10
claims
23
verbatim quotes
191
citations
3
research areas
✓
Open access · cc-by

Abstract

C5 volatile compounds, derived from fatty acids, are among the most important contributors to consumer liking of fresh tomatoes. Despite their important roles in flavour, the genes responsible for C5 volatile synthesis have yet to be identified. This work shows that their synthesis is catalysed in part by a 13-lipoxygenase (LOX), TomloxC, the same enzyme responsible for synthesis of C6 volatiles. C5 synthesis is independent of hydroperoxide lyase (HPL); moreover, HPL knockdown significantly increased C5 volatile synthesis. This LOX-dependent, HPL-independent pathway functions in both fruits and leaves. Synthesis of C5 volatiles increases in leaves following mechanical wounding but does not increase in response to infection with Xanthomonas campestris pv. vesicatoria. Large reductions in C5 and C6 volatiles in antisense TomloxC knockdown plants were observed but those reductions did not alter the development of disease symptoms, indicating that these volatiles do not have an important defensive function against this bacterial pathogen.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

TomloxC catalyses part of C5 volatile synthesis.

Gene
TomloxCe0
Outcome
synthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“their synthesis is catalysed in part by a 13-lipoxygenase (LOX), TomloxC”

✓ located verbatim in the source · abstract, characters 267–339 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

TomloxC also catalyses C6 volatile synthesis.

Gene
TomloxCe1
Outcome
synthesis of C6 volatilese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the same enzyme responsible for synthesis of C6 volatiles”

✓ located verbatim in the source · abstract, characters 341–398 · show in text ↑
e1

“a 13-lipoxygenase (LOX), TomloxC, the same enzyme”

✓ located verbatim in the source · abstract, characters 307–356 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

C5 synthesis is independent of hydroperoxide lyase.

Gene
hydroperoxide lyase (HPL)e0
Outcome
C5 synthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“C5 synthesis is independent of hydroperoxide lyase (HPL)”

✓ located verbatim in the source · abstract, characters 400–456 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

HPL knockdown significantly increased C5 volatile synthesis.

Treatment
HPL knockdowne0
Gene
HPLe0
Outcome
C5 volatile synthesise0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“HPL knockdown significantly increased C5 volatile synthesis”

✓ located verbatim in the source · abstract, characters 468–527 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The LOX-dependent, HPL-independent C5 pathway functions in fruits and leaves.

Organ / stage
fruits and leavese0
Outcome
pathway functions in both fruits and leavese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“This LOX-dependent, HPL-independent pathway functions in both fruits and leaves”

✓ located verbatim in the source · abstract, characters 529–608 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Mechanical wounding increased leaf C5 volatile synthesis.

Organ / stage
leavese0
Treatment
mechanical woundinge0
Outcome
Synthesis of C5 volatilese0
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Synthesis of C5 volatiles increases in leaves following mechanical wounding”

✓ located verbatim in the source · abstract, characters 610–685 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Xanthomonas infection did not increase leaf C5 volatile synthesis.

Treatment
infection with Xanthomonas campestris pv. vesicatoriae0
Interactor
Xanthomonas campestris pv. vesicatoriaXanthomonas campestrise0pathogen
Outcome
Synthesis of C5 volatilese1
Direction
does not increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Xanthomonas campestris
Xanthomonas campestris · InteractorScot Nelson · CC0 · Wikimedia Commons ↗

Verbatim

e0

“does not increase in response to infection with Xanthomonas campestris pv. vesicatoria”

✓ located verbatim in the source · abstract, characters 690–776 · show in text ↑
e1

“Synthesis of C5 volatiles increases in leaves”

✓ located verbatim in the source · abstract, characters 610–655 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Antisense TomloxC knockdown greatly reduced C5 volatiles.

Treatment
antisense TomloxC knockdowne0
Gene
TomloxCe0
Outcome
C5e0
Direction
reductionse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Large reductions in C5 and C6 volatiles in antisense TomloxC knockdown plants were observed”

✓ located verbatim in the source · abstract, characters 778–869 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Antisense TomloxC knockdown greatly reduced C6 volatiles.

Treatment
antisense TomloxC knockdowne0
Gene
TomloxCe0
Outcome
C6 volatilese0
Direction
reductionse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Large reductions in C5 and C6 volatiles in antisense TomloxC knockdown plants were observed”

✓ located verbatim in the source · abstract, characters 778–869 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

Reduced C5 and C6 volatiles did not alter bacterial disease symptom development.

Treatment
those reductionse0
Interactor
Xanthomonas campestris pv. vesicatoriaXanthomonas campestrise1pathogen
Outcome
development of disease symptomse0
Direction
did not altere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Xanthomonas campestris
Xanthomonas campestris · InteractorScot Nelson · CC0 · Wikimedia Commons ↗

Verbatim

e0

“those reductions did not alter the development of disease symptoms”

✓ located verbatim in the source · abstract, characters 874–940 · show in text ↑
e1

“Xanthomonas campestris pv. vesicatoria”

✓ located verbatim in the source · abstract, characters 738–776 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 82–88 · show in text ↑

infection · quality: phytochemicals · Solanum lycopersicum (tomato)Positive and negative results

17 papers: 7 positive, 10 negative or no effect

9 papers in the same direction as this paper · 7 in the opposite direction

  1. positive
  2. positive
  3. positive

13 papers more in this group

See all 17 papers →

mechanical · quality: phytochemicals · Solanum lycopersicum (tomato)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.