Paper · 2006 · The Plant Cell

TCP Transcription Factors Control the Morphology of Shoot Lateral Organs via Negative Regulation of the Expression of Boundary-Specific Genes inArabidopsis

Tomotsugu Koyama; Masahiko Furutani; Masao Tasaka; et al.

10
claims
18
verbatim quotes
418
citations
2
research areas
✓
Open access · cc-by-nc

Abstract

Plants form shoot meristems in the so-called boundary region, and these meristems are necessary for normal morphogenesis of aerial parts of plants. However, the molecular mechanisms that regulate the formation of shoot meristems are not fully understood. We report here that expression of a chimeric repressor from TCP3 (TCP3SRDX), a member of TEOSINTE BRANCHED1, CYCLOIDEA, and PCF (TCP) transcription factors in Arabidopsis thaliana, resulted in the formation of ectopic shoots on cotyledons and various defects in organ development. Expression of TCP3SRDX induced ectopic expression of boundary-specific genes, namely the CUP-SHAPED COTYLEDON (CUC) genes, and suppressed the expression of miR164, whose product cleaves the transcripts of CUC genes. This abnormal phenotype was substantially reversed on the cuc1 mutant background. By contrast, gain of function of TCP3 suppressed the expression of CUC genes and resulted in the fusion of cotyledons and defects in formation of shoots. The pattern of expression of TCP3 did not overlap with that of the CUC genes. In addition, we found that eight TCPs had functions similar to that of TCP3. Our results demonstrate that the TCP transcription factors play a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TCP3SRDX expression caused ectopic shoots on cotyledons.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
expression of a chimeric repressor from TCP3 (TCP3SRDX)e0
Gene
TCP3SRDXe0
Outcome
formation of ectopic shoots on cotyledonse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of a chimeric repressor from TCP3 (TCP3SRDX), a member of TEOSINTE BRANCHED1, CYCLOIDEA, and PCF (TCP) transcription factors in Arabidopsis thaliana, resulted in the formation of ectopic shoots on cotyledons and various defects in organ development”

✓ located verbatim in the source · abstract, characters 275–534 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TCP3SRDX expression caused organ development defects.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
expression of a chimeric repressor from TCP3 (TCP3SRDX)e0
Gene
TCP3SRDXe0
Outcome
defects in organ developmente0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of a chimeric repressor from TCP3 (TCP3SRDX), a member of TEOSINTE BRANCHED1, CYCLOIDEA, and PCF (TCP) transcription factors in Arabidopsis thaliana, resulted in the formation of ectopic shoots on cotyledons and various defects in organ development”

✓ located verbatim in the source · abstract, characters 275–534 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TCP3SRDX induced ectopic CUC expression.

Taxon
ArabidopsisArabidopsist0
Treatment
Expression of TCP3SRDXe0
Gene
CUP-SHAPED COTYLEDON (CUC) genese0
Outcome
expression of boundary-specific genese0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of TCP3SRDX induced ectopic expression of boundary-specific genes, namely the CUP-SHAPED COTYLEDON (CUC) genes, and suppressed the expression of miR164”

✓ located verbatim in the source · abstract, characters 536–698 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TCP3SRDX suppressed miR164 expression.

Taxon
ArabidopsisArabidopsist0
Treatment
Expression of TCP3SRDXe0
Gene
miR164e0
Outcome
expression of miR164e0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of TCP3SRDX induced ectopic expression of boundary-specific genes, namely the CUP-SHAPED COTYLEDON (CUC) genes, and suppressed the expression of miR164”

✓ located verbatim in the source · abstract, characters 536–698 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The cuc1 background substantially reversed the abnormal phenotype.

Taxon
ArabidopsisArabidopsist0
Material
cuc1 mutante0
Treatment
cuc1 mutant backgrounde0
Outcome
abnormal phenotypee0
Direction
substantially reversede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This abnormal phenotype was substantially reversed on the cuc1 mutant background”

✓ located verbatim in the source · abstract, characters 752–832 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TCP3 gain of function suppressed CUC gene expression.

Taxon
ArabidopsisArabidopsist0
Treatment
gain of function of TCP3e0
Gene
CUC genese0
Outcome
expression of CUC genese0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gain of function of TCP3 suppressed the expression of CUC genes and resulted in the fusion of cotyledons and defects in formation of shoots”

✓ located verbatim in the source · abstract, characters 847–986 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TCP3 gain of function caused cotyledon fusion and shoot formation defects.

Taxon
ArabidopsisArabidopsist0
Treatment
gain of function of TCP3e0
Outcome
fusion of cotyledons and defects in formation of shootse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gain of function of TCP3 suppressed the expression of CUC genes and resulted in the fusion of cotyledons and defects in formation of shoots”

✓ located verbatim in the source · abstract, characters 847–986 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

TCP3 and CUC gene expression patterns did not overlap.

Taxon
ArabidopsisArabidopsist0
Gene
TCP3e0
Outcome
pattern of expression of TCP3e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The pattern of expression of TCP3 did not overlap with that of the CUC genes”

✓ located verbatim in the source · abstract, characters 988–1064 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Eight TCPs had functions similar to TCP3.

Taxon
ArabidopsisArabidopsist0
Gene
TCPse0
Outcome
functions similar to that of TCP3e0
Value
eighte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“eight TCPs had functions similar to that of TCP3”

✓ located verbatim in the source · abstract, characters 1093–1141 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

TCP factors control shoot organ morphogenesis through negative regulation of boundary-specific genes.

Taxon
ArabidopsisArabidopsist0
Gene
TCP transcription factorse0
Outcome
morphogenesis of shoot organse0
Qualifier
negatively regulating the expression of boundary-specific genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the TCP transcription factors play a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes”

✓ located verbatim in the source · abstract, characters 1172–1336 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 144–155 · show in text ↑

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