Paper · 2014 · Genetics and Molecular Research

Cloning and characterization of a SnRK2 gene from Jatropha curcas L.

J. Chun; F.-S. Li; Y. Ma; et al.

15
claims
29
verbatim quotes
5
citations
3
research areas
✓
Open access

Abstract

Although the SnRK2 class of Ser/Thr protein kinases is critical for signal transduction and abiotic stress resistance in plants, there have been no studies to examine SnRK2 in Jatropha curcas L. In the present study, JcSnRK2 was cloned from J. curcas using the rapid amplification of cDNA end technique and characterized. The JcSnRK2 genomic sequence is 2578 base pairs (bp), includes 10 exons and 9 introns, and the 1017-bp open reading frame encodes 338 amino acids. JcSnRK2 was transcribed in all examined tissues, with the highest transcription rate observed in the roots, followed by the leaves and stalks; the lowest rate was observed in flowers and seeds. JcSnRK2 expression increased following abscisic acid treatment, salinity, and drought stress. During a 48-h stress period, the expression of JcSnRK2 showed 2 peaks and periodic up- and downregulation. JcSnRK2 was rapidly activated within 1 h under salt and drought stress, but not under cold stress. Because of the gene sequence and expression similarity of JcSnRK2 to AtSnRK2.8, primarily in the roots, an eukaryotic expression vector containing the JcSnRK2 gene (pBI121-JcSnRK2) was constructed and introduced to the Arabidopsis AtSnRK2.8 mutant snf2.8. JcSnRK2-overexpressing plants exhibited higher salt and drought tolerance, further demonstrating the function of JcSnRK2 in the osmotic stress response. J. curcas is highly resistant to extreme salt and drought conditions and JcSnRK2 was found to be activated under these conditions. Thus, JcSnRK2 is potential candidate for improving crop tolerance to salt and drought stress.

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Claims 15

Observationobservedoriginal resultmeasured

Claim · model-written summary

JcSnRK2 was cloned from Jatropha.

Taxon
J. curcasJatropha curcase0
Gene
JcSnRK2e0
Outcome
clonede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 was cloned from J. curcas”

✓ located verbatim in the source · abstract, characters 217–250 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The JcSnRK2 genomic sequence spans 2578 base pairs.

Taxon
Jatropha curcas L.Jatropha curcast0
Gene
JcSnRK2e0
Outcome
genomic sequencee0
Value
2578 base pairs (bp)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The JcSnRK2 genomic sequence is 2578 base pairs (bp)”

✓ located verbatim in the source · abstract, characters 322–374 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

JcSnRK2 contains 10 exons and 9 introns.

Taxon
Jatropha curcas L.Jatropha curcast0
Outcome
exons and 9 intronse0
Value
10 exons and 9 intronse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“includes 10 exons and 9 introns”

✓ located verbatim in the source · abstract, characters 376–407 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The JcSnRK2 open reading frame is 1017 bp and encodes 338 amino acids.

Taxon
Jatropha curcas L.Jatropha curcast0
Outcome
open reading framee0
Value
1017-bpe0
Qualifier
338 amino acidse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the 1017-bp open reading frame encodes 338 amino acids”

✓ located verbatim in the source · abstract, characters 413–467 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

JcSnRK2 was transcribed in all examined tissues, with highest transcription in roots and lowest in flowers and seeds.

Taxon
Jatropha curcas L.Jatropha curcast0
Organ / stage
rootse0
Gene
JcSnRK2e0
Outcome
transcription ratee0
Direction
higheste0
Qualifier
lowest rate was observed in flowers and seedse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 was transcribed in all examined tissues, with the highest transcription rate observed in the roots, followed by the leaves and stalks; the lowest rate was observed in flowers and seeds”

✓ located verbatim in the source · abstract, characters 469–661 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JcSnRK2 expression increased after abscisic acid treatment.

Taxon
Jatropha curcas L.Jatropha curcast0
Treatment
abscisic acid treatmente0
Gene
JcSnRK2e0
Outcome
JcSnRK2 expressione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 expression increased following abscisic acid treatment”

✓ located verbatim in the source · abstract, characters 663–725 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JcSnRK2 expression increased under salinity.

Taxon
Jatropha curcas L.Jatropha curcast0
Treatment
salinitye0
Gene
JcSnRK2e0
Outcome
JcSnRK2 expressione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 expression increased following abscisic acid treatment, salinity, and drought stress”

✓ located verbatim in the source · abstract, characters 663–755 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JcSnRK2 expression increased under drought stress.

Taxon
Jatropha curcas L.Jatropha curcast0
Treatment
drought stresse0
Gene
JcSnRK2e0
Outcome
JcSnRK2 expressione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 expression increased following abscisic acid treatment, salinity, and drought stress”

✓ located verbatim in the source · abstract, characters 663–755 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

JcSnRK2 expression had two peaks with periodic up- and downregulation over 48 hours.

Taxon
Jatropha curcas L.Jatropha curcast0
Gene
JcSnRK2e0
Outcome
expressione0
Value
2 peakse0
Qualifier
48-h stress periode0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“During a 48-h stress period, the expression of JcSnRK2 showed 2 peaks and periodic up- and downregulation”

✓ located verbatim in the source · abstract, characters 757–862 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Salt stress activated JcSnRK2 within one hour.

Taxon
Jatropha curcas L.Jatropha curcast0
Treatment
salte0
Gene
JcSnRK2e0
Outcome
JcSnRK2e0
Direction
activatede0
Value
within 1 he0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 was rapidly activated within 1 h under salt and drought stress, but not under cold stress”

✓ located verbatim in the source · abstract, characters 864–961 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Drought stress activated JcSnRK2 within one hour.

Taxon
Jatropha curcas L.Jatropha curcast0
Treatment
drought stresse0
Gene
JcSnRK2e0
Outcome
JcSnRK2e0
Direction
activatede0
Value
within 1 he0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 was rapidly activated within 1 h under salt and drought stress, but not under cold stress”

✓ located verbatim in the source · abstract, characters 864–961 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Cold stress did not activate JcSnRK2.

Taxon
Jatropha curcas L.Jatropha curcast0
Treatment
cold stresse0
Gene
JcSnRK2e0
Outcome
JcSnRK2e0
Direction
not under cold stresse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 was rapidly activated within 1 h under salt and drought stress, but not under cold stress”

✓ located verbatim in the source · abstract, characters 864–961 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JcSnRK2 overexpression increased salt tolerance in Arabidopsis mutant plants.

Taxon
ArabidopsisArabidopsise1
Treatment
JcSnRK2-overexpressinge0
Gene
JcSnRK2e0
Outcome
salte0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2-overexpressing plants exhibited higher salt and drought tolerance”

✓ located verbatim in the source · abstract, characters 1219–1292 · show in text ↑
e1

“Arabidopsis AtSnRK2.8 mutant snf2.8”

✓ located verbatim in the source · abstract, characters 1182–1217 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JcSnRK2 overexpression increased drought tolerance in Arabidopsis mutant plants.

Taxon
ArabidopsisArabidopsise1
Treatment
JcSnRK2-overexpressinge0
Gene
JcSnRK2e0
Outcome
drought tolerancee0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2-overexpressing plants exhibited higher salt and drought tolerance”

✓ located verbatim in the source · abstract, characters 1219–1292 · show in text ↑
e1

“Arabidopsis AtSnRK2.8 mutant snf2.8”

✓ located verbatim in the source · abstract, characters 1182–1217 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors propose JcSnRK2 as a candidate for improving crop salt and drought tolerance.

Taxon
Jatropha curcas L.Jatropha curcast0
Gene
JcSnRK2e0
Outcome
improving crop tolerance to salt and drought stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Jatropha curcas
Jatropha curcas · Taxon · picture from its Wikimedia Commons categoryAdityamadhav83 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“JcSnRK2 is potential candidate for improving crop tolerance to salt and drought stress”

✓ located verbatim in the source · abstract, characters 1509–1595 · show in text ↑
t0

“Jatropha curcas L.”

✓ located verbatim in the source · title, characters 50–68 · show in text ↑

drought · molecular: expression · Jatropha curcasResults agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

salinity · molecular: expression · Jatropha curcasResults agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.