Paper · 2015 · AoB Plants

Physiological, anatomical and transcriptional alterations in a rice mutant leading to enhanced water stress tolerance

John Milton Lima; Manoj Nath; Prasad Dokku; et al.

8
claims
16
verbatim quotes
77
citations
3
research areas
✓
Open access · cc-by

Abstract

Water stress is one of the most severe constraints to crop productivity. Plants display a variety of physiological and biochemical responses both at the cellular and whole organism level upon sensing water stress. Leaf rolling, stomatal closure, deeper root penetration, higher relative water content (RWC) and better osmotic adjustment are some of the mechanisms that plants employ to overcome water stress. In the current study, we report a mutant, enhanced water stress tolerant1 (ewst1) with enhanced water stress tolerance, identified from the ethyl methanesulfonate-induced mutant population of rice variety Nagina22 by field screening followed by withdrawal of irrigation in pots and hydroponics (PEG 6000). Though ewst1 was morphologically similar to the wild type (WT) for 35 of the 38 morphological descriptors (except chalky endosperm/expression of white core, decorticated grain colour and grain weight), it showed enhanced germination in polyethylene glycol-infused medium. It exhibited increase in maximum root length without any significant changes in its root weight, root volume and total root number on crown when compared with the WT under stress in PVC tube experiment. It also showed better performance for various physiological parameters such as RWC, cell membrane stability and chlorophyll concentration upon water stress in a pot experiment. Root anatomy and stomatal microscopic studies revealed changes in the number of xylem and phloem cells, size of central meta-xylem and number of closed stomata in ewst1. Comparative genome-wide transcriptome analysis identified genes related to exocytosis, secondary metabolites, tryptophan biosynthesis, protein phosphorylation and other signalling pathways to be playing a role in enhanced response to water stress in ewst1. The possible involvement of a candidate gene with respect to the observed morpho-physiological and transcriptional changes and its role in stress tolerance are discussed. The mutant identified and characterized in this study will be useful for further dissection of water stress tolerance in rice.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

ewst1 showed enhanced water stress tolerance.

Material
ewst1e0
Outcome
enhanced water stress tolerancee0
Direction
enhancede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ewst1) with enhanced water stress tolerance”

✓ located verbatim in the source · abstract, characters 484–527 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ewst1 resembled wild type for 35 of 38 morphological descriptors, with three stated exceptions.

Material
ewst1e0
Outcome
morphologically similare0
Value
35 of the 38 morphological descriptorse0
Comparator
wild type (WT)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ewst1 was morphologically similar to the wild type (WT) for 35 of the 38 morphological descriptors (except chalky endosperm/expression of white core, decorticated grain colour and grain weight)”

✓ located verbatim in the source · abstract, characters 722–915 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ewst1 germinated better in polyethylene glycol medium.

Material
rice mutantt0
Treatment
polyethylene glycol-infused mediume0
Outcome
germinatione0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“it showed enhanced germination in polyethylene glycol-infused medium”

✓ located verbatim in the source · abstract, characters 917–985 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Under stress, ewst1 had greater maximum root length than wild type.

Outcome
maximum root lengthe0
Direction
increasee0
Qualifier
under stresse0
Comparator
WTe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“increase in maximum root length without any significant changes in its root weight, root volume and total root number on crown when compared with the WT under stress”

✓ located verbatim in the source · abstract, characters 1000–1165 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑
Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Under stress, ewst1 root weight, root volume and crown root number did not change significantly relative to WT.

Outcome
root weight, root volume and total root number on crowne0
Direction
without any significant changese0
Comparator
WTe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“without any significant changes in its root weight, root volume and total root number on crown when compared with the WT under stress”

✓ located verbatim in the source · abstract, characters 1032–1165 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Under water stress, ewst1 performed better for RWC, membrane stability and chlorophyll concentration.

Outcome
RWC, cell membrane stability and chlorophyll concentratione0
Direction
bettere0
Qualifier
upon water stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“better performance for various physiological parameters such as RWC, cell membrane stability and chlorophyll concentration upon water stress”

✓ located verbatim in the source · abstract, characters 1205–1345 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ewst1 had anatomical differences in vascular cell numbers, central meta-xylem size and closed stomata number.

Material
ewst1e0
Outcome
number of xylem and phloem cells, size of central meta-xylem and number of closed stomatae0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“changes in the number of xylem and phloem cells, size of central meta-xylem and number of closed stomata in ewst1”

✓ located verbatim in the source · abstract, characters 1422–1535 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Transcriptome analysis implicated genes in exocytosis, secondary metabolism, tryptophan biosynthesis, phosphorylation and signaling in ewst1 stress response.

Material
ewst1e0
Gene
genes related to exocytosis, secondary metabolites, tryptophan biosynthesis, protein phosphorylation and other signalling pathwayse0
Outcome
enhanced response to water stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“identified genes related to exocytosis, secondary metabolites, tryptophan biosynthesis, protein phosphorylation and other signalling pathways to be playing a role in enhanced response to water stress in ewst1”

✓ located verbatim in the source · abstract, characters 1584–1792 · show in text ↑
t0

“rice mutant”

✓ located verbatim in the source · title, characters 63–74 · show in text ↑

in vitro · growth · Oryza sativa (rice)Positive and negative results

165 papers: 140 positive, 25 negative or no effect

139 papers in the same direction as this paper · 24 in the opposite direction · 1 reporting no difference from an alternative

  1. negative
  2. negative
  3. negative

161 papers more in this group

See all 165 papers →

drought · growth · Oryza sativa (rice)Positive and negative results

282 papers: 98 positive, 184 negative or no effect

97 papers in the same direction as this paper · 182 in the opposite direction · 2 reporting no difference from an alternative

  1. positive
  2. negative
  3. negative

278 papers more in this group

See all 282 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.