Paper · 2012 · cIRcle (University of British Columbia)

Evaluating the role of the raffinose family of oligosaccharides in hybrid poplar

Unda, Faride

20
claims
40
verbatim quotes
0
citations
4
research areas
✓
Open access

Abstract

The raffinose family of oligosaccharides (RFO) function as transport carbohydrates in the phloem, storage compounds in sink tissues, and as putative metabolic agents that combat plant stresses. Research on the RFO pathway has focused on seed biology and plants that transport raffinose as their primary photoassimilate. In contrast, few studies have explored this pathway in woody species. As such, this thesis investigated the fundamental function of the RFO enzymes in hybrid poplar, with emphasis on galactinol synthase (GolS), an enzyme key to the pathway. Phylogenetic comparisons of Populus Go1S with other known GolS suggest a putative role for these enzymes in stress response. Protein analysis of two heterologously expressed isoforms demonstrated that they are true Go1S; with Pa×gGolSI possessing a broader pH and temperature range than Pa×gGolSII. Expression patterns also revealed that the Pa×gGolSII transcript abundance varied seasonally. Together, the results suggest that Pa×gGolSI may be involved in basic metabolic activities, while Pa×gGolSII is likely involved in seasonal mobilization of carbohydrates. To further elucidate the in-planta Go1S function, transgenic trees with mis-regulated GolS were generated. Two AtGolS3 over-expression (OE) transgenic lines showed effects on growth, while other lines appeared normal and possessed marginally modified cell wall characteristics. The extreme over-expressers were severely stunted and had cell wall traits characteristic of tension wood. AtGolS3-OE lines showed reduction in the microfibril angle, increase in cell wall crystallinity and possessed higher cellulose, and lower mannose and lignin contents. Interestingly, although galactinol and raffinose contents increased dramatically, they were not more tolerant to abiotic stress under the conditions tested. These results suggest that the over-expression of GolS and its product galactinol may serve as a molecular signal that initiates different metabolic changes for combating stress, culminating in the formation of tension wood. Additionally, over expression of raffinose synthase (RFS) resulted in increased biomass and total cellulose content. However, it does not appear to have a similar signalling role. Collectively, this research opens new insight about functions of the RFO in poplar, with the participation of GolS in stress signalling and consequent tension wood formation, and the importance of RFS to carbon allocation and growth.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 20

Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Phylogenetic comparisons suggest Populus Go1S may have a stress-response role.

Taxon
hybrid poplarPopulust0
Gene
Populus Go1Se0
Outcome
stress responsee0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Phylogenetic comparisons of Populus Go1S with other known GolS suggest a putative role for these enzymes in stress response.”

✓ located verbatim in the source · abstract, characters 561–685 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Protein analysis verified that the two expressed isoforms are Go1S.

Taxon
hybrid poplarPopulust0
Gene
Go1Se0
Outcome
true Go1Se0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Protein analysis of two heterologously expressed isoforms demonstrated that they are true Go1S”

✓ located verbatim in the source · abstract, characters 686–780 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Pa×gGolSI had a broader pH and temperature range than Pa×gGolSII.

Taxon
hybrid poplarPopulust0
Gene
Pa×gGolSIe0
Outcome
pH and temperature rangee0
Direction
broadere0
Comparator
Pa×gGolSIIe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Pa×gGolSI possessing a broader pH and temperature range than Pa×gGolSII”

✓ located verbatim in the source · abstract, characters 787–858 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Pa×gGolSII transcript abundance varied seasonally.

Taxon
hybrid poplarPopulust0
Gene
Pa×gGolSIIe0
Outcome
transcript abundancee0
Direction
variede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the Pa×gGolSII transcript abundance varied seasonally”

✓ located verbatim in the source · abstract, characters 899–952 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer Pa×gGolSI may support basic metabolism.

Taxon
hybrid poplarPopulust0
Gene
Pa×gGolSIe0
Outcome
basic metabolic activitiese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Pa×gGolSI may be involved in basic metabolic activities”

✓ located verbatim in the source · abstract, characters 989–1044 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer Pa×gGolSII likely participates in seasonal carbohydrate mobilization.

Taxon
hybrid poplarPopulust0
Gene
Pa×gGolSIIe0
Outcome
seasonal mobilization of carbohydratese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Pa×gGolSII is likely involved in seasonal mobilization of carbohydrates”

✓ located verbatim in the source · abstract, characters 1052–1123 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

Two AtGolS3 over-expression lines showed growth effects.

Taxon
hybrid poplarPopulust0
Treatment
AtGolS3 over-expression (OE)e0
Gene
AtGolS3e0
Outcome
growthe0
Comparator
other linese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Two AtGolS3 over-expression (OE) transgenic lines showed effects on growth, while other lines appeared normal”

✓ located verbatim in the source · abstract, characters 1232–1341 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Other over-expression lines had marginal cell-wall changes.

Taxon
hybrid poplarPopulust0
Outcome
cell wall characteristicse0
Qualifier
marginally modifiede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“other lines appeared normal and possessed marginally modified cell wall characteristics”

✓ located verbatim in the source · abstract, characters 1314–1401 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Extreme over-expressers were severely stunted.

Taxon
hybrid poplarPopulust0
Treatment
extreme over-expresserse0
Outcome
stuntede0
Direction
stuntede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The extreme over-expressers were severely stunted”

✓ located verbatim in the source · abstract, characters 1403–1452 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Extreme over-expressers developed tension-wood traits.

Taxon
hybrid poplarPopulust0
Outcome
cell wall traits characteristic of tension woode0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“had cell wall traits characteristic of tension wood”

✓ located verbatim in the source · abstract, characters 1457–1508 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AtGolS3-OE lines had reduced microfibril angle.

Taxon
hybrid poplarPopulust0
Treatment
AtGolS3-OEe0
Outcome
microfibril anglee0
Direction
reductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtGolS3-OE lines showed reduction in the microfibril angle”

✓ located verbatim in the source · abstract, characters 1510–1568 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AtGolS3-OE lines had increased cell-wall crystallinity.

Taxon
hybrid poplarPopulust0
Treatment
AtGolS3-OEe0
Outcome
cell wall crystallinitye0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtGolS3-OE lines showed reduction in the microfibril angle, increase in cell wall crystallinity”

✓ located verbatim in the source · abstract, characters 1510–1605 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AtGolS3-OE lines had higher cellulose content.

Taxon
hybrid poplarPopulust0
Treatment
AtGolS3-OEe0
Outcome
cellulosee0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtGolS3-OE lines showed reduction in the microfibril angle, increase in cell wall crystallinity and possessed higher cellulose”

✓ located verbatim in the source · abstract, characters 1510–1636 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AtGolS3-OE lines had lower mannose content.

Taxon
hybrid poplarPopulust0
Treatment
AtGolS3-OEe0
Outcome
mannosee0
Direction
lowere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtGolS3-OE lines showed reduction in the microfibril angle, increase in cell wall crystallinity and possessed higher cellulose, and lower mannose”

✓ located verbatim in the source · abstract, characters 1510–1655 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AtGolS3-OE lines had lower lignin content.

Taxon
hybrid poplarPopulust0
Treatment
AtGolS3-OEe0
Outcome
lignin contentse0
Direction
lowere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtGolS3-OE lines showed reduction in the microfibril angle, increase in cell wall crystallinity and possessed higher cellulose, and lower mannose and lignin contents”

✓ located verbatim in the source · abstract, characters 1510–1675 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Galactinol and raffinose contents increased dramatically in the transgenic lines.

Taxon
hybrid poplarPopulust0
Outcome
galactinol and raffinose contentse0
Direction
increasede0

Not reportedTreatmentComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“although galactinol and raffinose contents increased dramatically”

✓ located verbatim in the source · abstract, characters 1692–1757 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

The lines were not more tolerant to abiotic stress under the tested conditions.

Taxon
hybrid poplarPopulust0
Outcome
tolerant to abiotic stresse0
Direction
not moree0
Qualifier
under the conditions testede0

Not reportedTreatmentComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“they were not more tolerant to abiotic stress under the conditions tested”

✓ located verbatim in the source · abstract, characters 1759–1832 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors propose that GolS over-expression and galactinol signal tension-wood formation.

Taxon
hybrid poplarPopulust0
Gene
GolSe0
Compound
galactinole0
Outcome
formation of tension woode0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“over-expression of GolS and its product galactinol may serve as a molecular signal that initiates different metabolic changes for combating stress, culminating in the formation of tension wood”

✓ located verbatim in the source · abstract, characters 1865–2057 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

RFS over-expression increased biomass.

Taxon
hybrid poplarPopulust0
Treatment
over expression of raffinose synthase (RFS)e0
Gene
raffinose synthase (RFS)e0
Outcome
biomasse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“over expression of raffinose synthase (RFS) resulted in increased biomass”

✓ located verbatim in the source · abstract, characters 2073–2146 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

RFS over-expression increased total cellulose content.

Taxon
hybrid poplarPopulust0
Treatment
over expression of raffinose synthase (RFS)e0
Gene
raffinose synthase (RFS)e0
Outcome
total cellulose contente0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Populus
Populus · Taxon · picture of the genus (one of its species)Christian Fischer · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“over expression of raffinose synthase (RFS) resulted in increased biomass and total cellulose content”

✓ located verbatim in the source · abstract, characters 2073–2174 · show in text ↑
t0

“hybrid poplar”

✓ located verbatim in the source · title, characters 67–80 · show in text ↑