Paper · 2016 · Proceedings of the National Academy of Sciences

Overexpression of a pH-sensitive nitrate transporter in rice increases crop yields

Xiaorong Fan; Zhong Tang; Yawen Tan; et al.

7
claims
7
verbatim quotes
403
citations
3
research areas
✓
Open access

Abstract

Cellular pH homeostasis is fundamental for life, and all cells adapt to maintain this balance. In plants, the chemical form of nitrogen supply, nitrate and ammonium, is one of the cellular pH dominators. We report that the rice nitrate transporter OsNRT2.3 is transcribed into two spliced isoforms with a natural variation in expression ratio. One splice form, OsNRT2.3b is located on the plasma membrane, is expressed mainly in the phloem, and has a regulatory motif on the cytosolic side that acts to switch nitrate transport activity on or off by a pH-sensing mechanism. High OsNRT2.3b expression in rice enhances the pH-buffering capacity of the plant, increasing N, Fe, and P uptake. In field trials, increased expression of OsNRT2.3b improved grain yield and nitrogen use efficiency (NUE) by 40%. These results indicate that pH sensing by the rice nitrate transporter OsNRT2.3b is important for plant adaption to varied N supply forms and can provide a target for improving NUE.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Rice OsNRT2.3 has two splice isoforms with natural variation in expression ratio.

Gene
OsNRT2.3e0
Outcome
two spliced isoformse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the rice nitrate transporter OsNRT2.3 is transcribed into two spliced isoforms with a natural variation in expression ratio”

✓ located verbatim in the source · abstract, characters 219–342 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsNRT2.3b is on the plasma membrane and expressed mainly in phloem.

Gene
OsNRT2.3be0
Outcome
located on the plasma membrane, is expressed mainly in the phloeme0

Not reportedTaxon

Verbatim

e0

“OsNRT2.3b is located on the plasma membrane, is expressed mainly in the phloem”

✓ located verbatim in the source · abstract, characters 361–439 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

A cytosolic regulatory motif switches OsNRT2.3b nitrate transport through pH sensing.

Outcome
nitrate transport activitye0
Qualifier
pH-sensing mechanisme0

Not reportedTaxon

Verbatim

e0

“has a regulatory motif on the cytosolic side that acts to switch nitrate transport activity on or off by a pH-sensing mechanism”

✓ located verbatim in the source · abstract, characters 445–572 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High OsNRT2.3b expression enhances rice pH buffering capacity.

Treatment
High OsNRT2.3b expressione0
Gene
OsNRT2.3be0
Outcome
pH-buffering capacitye0
Direction
enhancese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“High OsNRT2.3b expression in rice enhances the pH-buffering capacity of the plant”

✓ located verbatim in the source · abstract, characters 574–655 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

High OsNRT2.3b expression increases rice N, Fe and P uptake.

Treatment
High OsNRT2.3b expressione0
Gene
OsNRT2.3be0
Outcome
N, Fe, and P uptakee0
Direction
increasinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“High OsNRT2.3b expression in rice enhances the pH-buffering capacity of the plant, increasing N, Fe, and P uptake”

✓ located verbatim in the source · abstract, characters 574–687 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

In field trials, increased OsNRT2.3b expression improved grain yield by 40%.

Treatment
increased expression of OsNRT2.3be0
Outcome
grain yielde0
Direction
improvede0
Value
40%e0
Setting
field trialse0

Not reportedTaxonComparator

Verbatim

e0

“In field trials, increased expression of OsNRT2.3b improved grain yield and nitrogen use efficiency (NUE) by 40%”

✓ located verbatim in the source · abstract, characters 689–801 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

In field trials, increased OsNRT2.3b expression improved NUE by 40%.

Treatment
increased expression of OsNRT2.3be0
Outcome
nitrogen use efficiency (NUE)e0
Direction
improvede0
Value
40%e0
Setting
field trialse0

Not reportedTaxonComparator

Verbatim

e0

“In field trials, increased expression of OsNRT2.3b improved grain yield and nitrogen use efficiency (NUE) by 40%”

✓ located verbatim in the source · abstract, characters 689–801 · show in text ↑

transgenic · yield · Oryza sativa (rice)Positive and negative results

102 papers: 81 positive, 21 negative or no effect

80 papers in the same direction as this paper · 18 in the opposite direction · 3 reporting no difference from an alternative

  1. positive
  2. no effect
  3. negative

98 papers more in this group

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transgenic · nutrient: efficiency · Oryza sativa (rice)Results agree

5 papers: 5 positive, 0 negative or no effect

4 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.