Paper · 2017 · Plant Growth Regulation

Sigma factor FaSigE positively regulates strawberry fruit ripening by ABA

Shaohui Zhang; Bingzhu Hou; Lu Chai; et al.

5
claims
9
verbatim quotes
16
citations
3
research areas
✓
Open access · cc-by

Abstract

Bacterial sigma factor E (SigE) is a positive regulator of sugar catabolism via its interaction with the H subunit of Mg-chelatase (CHLH), which serves as both putative abscisic acid (ABA) receptor (ABAR) in Arabidopsis thaliana and positive regulator of strawberry fruit ripening. However, whether SigE influences strawberry fruit ripening has not been determined. We used RNA sequencing and a qPCR to confirm that the expression of the strawberry SigE gene ( FaSigE ) is rapidly upregulated in fruits turning red, suggesting FaSigE might mediate strawberry fruit ripening. Silencing FaSigE by intron-spliced hairpin RNA-mediated RNA interference significantly inhibited fruit ripening. This observation was confirmed by analyses of fruit firmness, soluble sugar, ABA, and anthocyanin contents, as well as transcript levels of genes related to fruit ripening and ABA signaling. Interestingly, a firefly luciferase complementation assay revealed that FaSigE can interact with FaABAR, while an in vitro fruit disc incubation test indicated ABA induces FaSigE expression. Moreover, a surface plasmon resonance assay proved that FaABAR produced in yeast cells can bind to ABA, with a binding dissociation constant of 50 µM. In conclusion, FaSigE can interact with FaABAR and positively regulates strawberry fruit ripening via ABA.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

FaSigE expression rose rapidly in fruits turning red.

Taxon
strawberryFragaria ×ananassae0
Organ / stage
fruits turning rede0
Gene
FaSigEe0
Outcome
expression of the strawberry SigE genee0
Direction
upregulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the expression of the strawberry SigE gene ( FaSigE ) is rapidly upregulated in fruits turning red”

✓ located verbatim in the source · abstract, characters 416–514 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Silencing FaSigE significantly inhibited strawberry fruit ripening.

Taxon
strawberryFragaria ×ananassat0
Treatment
Silencing FaSigE by intron-spliced hairpin RNA-mediated RNA interferencee0
Gene
FaSigEe0
Outcome
fruit ripeninge0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Silencing FaSigE by intron-spliced hairpin RNA-mediated RNA interference significantly inhibited fruit ripening”

✓ located verbatim in the source · abstract, characters 575–686 · show in text ↑
t0

“strawberry fruit ripening”

✓ located verbatim in the source · title, characters 41–66 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

FaSigE interacted with FaABAR in a luciferase complementation assay.

Taxon
strawberryFragaria ×ananassat0
Gene
FaSigEe0
Outcome
interact with FaABARe0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“a firefly luciferase complementation assay revealed that FaSigE can interact with FaABAR”

✓ located verbatim in the source · abstract, characters 894–982 · show in text ↑
t0

“strawberry fruit ripening”

✓ located verbatim in the source · title, characters 41–66 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ABA induced FaSigE expression in a fruit disc assay.

Taxon
strawberryFragaria ×ananassat0
Organ / stage
fruit disce0
Treatment
ABAe0
Gene
FaSigEe0
Outcome
FaSigE expressione0
Direction
inducese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“an in vitro fruit disc incubation test indicated ABA induces FaSigE expression”

✓ located verbatim in the source · abstract, characters 990–1068 · show in text ↑
t0

“strawberry fruit ripening”

✓ located verbatim in the source · title, characters 41–66 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Yeast-produced FaABAR bound ABA with a dissociation constant of 50 µM.

Taxon
strawberryFragaria ×ananassat0
Gene
FaABARe0
Compound
ABAe0
Outcome
bind to ABAe0
Value
50 µMe0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“FaABAR produced in yeast cells can bind to ABA, with a binding dissociation constant of 50 µM”

✓ located verbatim in the source · abstract, characters 1126–1219 · show in text ↑
t0

“strawberry fruit ripening”

✓ located verbatim in the source · title, characters 41–66 · show in text ↑

(+)-abscisic acid · molecular: expression · Fragaria x ananassa (strawberry)Positive and negative results

10 papers: 8 positive, 2 negative or no effect

7 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

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loss of function · quality: postharvest · Fragaria x ananassa (strawberry)Positive and negative results

22 papers: 11 positive, 11 negative or no effect

10 papers in the same direction as this paper · 11 in the opposite direction

  1. positive
  2. positive
  3. negative

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.