Paper · 2019 · DOAJ (DOAJ: Directory of Open Access Journals)

Identification and Functional Characterization of Arabidopsis icl Mutant Under Trehalose Feeding in Light and Dark Conditions

Aniseh Noroozipoor; Mahnaz Aghdasi; Hamid Reza Sadeghipour

12
claims
24
verbatim quotes
0
citations
3
research areas
—
Not open access

Abstract

Trehalose is a non-reducing sugar that plays an important role in plant growth and development. To study the role of trehalose on lipid metabolism and gluconeogenesis, Arabidopsis thaliana wild type (WT) and TreF (a line expressing trehalase) were grown on ½ MS medium with or without 100 mM sucrose and or trehalose in light or continuous darkness. In dark, trehalose leads skotomorphogenesis in WT seedlings and inhibits hypocotyl elongation without altering root growth. Then, a knock out mutant of icl (defective in isocitrate lyase/ICL) was identified in the SALK T-DNA insertion line, yet plants of this line were not altered with regard to growth on MS medium supplemented with or without trehalose in light condition, compared to WT. But the hypocotyl length of icl seedling was shorter than WT when grown on trehalose in darkness. The current data revealed that trehalose feeding altered seedling establishment in both WT and icl mutant. ICL enzyme activity measurement showed that the patterns of changes were similar in all treatments. Meanwhile, trehalose feeding reduced icl gene expression and enzyme activity. Trehalose fed seedlings demonstrated a high accumulation of total lipids in darkness. Also fatty acids level was higher in seedlings grown in darkness, compared with the light condition. Therefore, trehalose may inhibit lipid utilization by suppressing icl gene expression and enzyme activity and thus restrict the supply of carbon sources to the growing seedling. These observations confirm that trehalose regulates plant metabolism in both light and dark.

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Claims 12

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

In darkness, trehalose induced skotomorphogenesis in WT seedlings.

Taxon
ArabidopsisArabidopsist0
Material
WT seedlingse0
Treatment
trehalosee0
Outcome
skotomorphogenesise0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In dark, trehalose leads skotomorphogenesis in WT seedlings”

✓ located verbatim in the source · abstract, characters 350–409 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

In darkness, trehalose inhibited hypocotyl elongation in WT seedlings.

Taxon
ArabidopsisArabidopsist0
Material
WT seedlingse0
Treatment
trehalosee0
Outcome
hypocotyl elongatione0
Direction
inhibitse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In dark, trehalose leads skotomorphogenesis in WT seedlings and inhibits hypocotyl elongation without altering root growth”

✓ located verbatim in the source · abstract, characters 350–472 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

In darkness, trehalose did not alter WT root growth.

Taxon
ArabidopsisArabidopsist0
Treatment
trehalosee0
Outcome
root growthe0
Direction
without alteringe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In dark, trehalose leads skotomorphogenesis in WT seedlings and inhibits hypocotyl elongation without altering root growth”

✓ located verbatim in the source · abstract, characters 350–472 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

The identified icl knockout grew similarly to WT on MS medium with or without trehalose in light.

Taxon
ArabidopsisArabidopsist0
Material
iclt0
Treatment
MS medium supplemented with or without trehalose in light conditione0
Outcome
growthe0
Direction
not alterede0
Comparator
WTe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“plants of this line were not altered with regard to growth on MS medium supplemented with or without trehalose in light condition, compared to WT”

✓ located verbatim in the source · abstract, characters 595–740 · show in text ↑
t0

“Arabidopsis icl Mutant”

✓ located verbatim in the source · title, characters 50–72 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

On trehalose in darkness, icl seedlings had shorter hypocotyls than WT.

Taxon
ArabidopsisArabidopsist0
Material
icl seedlinge0
Treatment
trehalose in darknesse0
Outcome
hypocotyl lengthe0
Direction
shortere0
Comparator
WTe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the hypocotyl length of icl seedling was shorter than WT when grown on trehalose in darkness”

✓ located verbatim in the source · abstract, characters 746–838 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Trehalose feeding altered seedling establishment in both WT and icl.

Taxon
ArabidopsisArabidopsist0
Material
WT and icl mutante0
Treatment
trehalose feedinge0
Outcome
seedling establishmente0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“trehalose feeding altered seedling establishment in both WT and icl mutant”

✓ located verbatim in the source · abstract, characters 871–945 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ICL enzyme activity showed similar change patterns across treatments.

Taxon
ArabidopsisArabidopsist0
Gene
ICLe0
Outcome
patterns of changese0
Direction
similare0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ICL enzyme activity measurement showed that the patterns of changes were similar in all treatments”

✓ located verbatim in the source · abstract, characters 947–1045 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Trehalose feeding reduced icl gene expression.

Taxon
ArabidopsisArabidopsist0
Treatment
trehalose feedinge0
Gene
icle0
Outcome
icl gene expressione0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“trehalose feeding reduced icl gene expression and enzyme activity”

✓ located verbatim in the source · abstract, characters 1058–1123 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Trehalose feeding reduced ICL enzyme activity.

Taxon
ArabidopsisArabidopsist0
Treatment
trehalose feedinge0
Gene
icle0
Outcome
enzyme activitye0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“trehalose feeding reduced icl gene expression and enzyme activity”

✓ located verbatim in the source · abstract, characters 1058–1123 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Trehalose-fed seedlings accumulated high total lipids in darkness.

Taxon
ArabidopsisArabidopsist0
Treatment
Trehalosee0
Outcome
total lipidse0
Direction
highe0
Qualifier
in darknesse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Trehalose fed seedlings demonstrated a high accumulation of total lipids in darkness”

✓ located verbatim in the source · abstract, characters 1125–1209 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Seedlings in darkness had higher fatty acid levels than those in light.

Taxon
ArabidopsisArabidopsist0
Treatment
darknesse0
Outcome
fatty acids levele0
Direction
highere0
Comparator
light conditione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“fatty acids level was higher in seedlings grown in darkness, compared with the light condition”

✓ located verbatim in the source · abstract, characters 1216–1310 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Authors suggest trehalose suppresses icl expression and activity, inhibiting lipid utilization and carbon supply.

Taxon
ArabidopsisArabidopsist0
Treatment
trehalosee0
Gene
icle0
Outcome
lipid utilizatione0
Qualifier
restrict the supply of carbon sources to the growing seedlinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“trehalose may inhibit lipid utilization by suppressing icl gene expression and enzyme activity and thus restrict the supply of carbon sources to the growing seedling”

✓ located verbatim in the source · abstract, characters 1323–1488 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 50–61 · show in text ↑

trehalose · molecular: expression · ArabidopsisResults agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. no effect
  2. negative
See all 3 papers →

infection · molecular: expression · ArabidopsisPositive and negative results

28 papers: 19 positive, 9 negative or no effect

8 papers in the same direction as this paper · 19 in the opposite direction

  1. positive
  2. positive
  3. positive

24 papers more in this group

See all 28 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.