Paper · 2020 · International Journal of Molecular Sciences

The Interplay between Toxic and Essential Metals for Their Uptake and Translocation Is Likely Governed by DNA Methylation and Histone Deacetylation in Maize

Sarfraz Shafiq; Asim Ali; Yasar Sajjad; et al.

8
claims
17
verbatim quotes
42
citations
3
research areas
✓
Open access · cc-by

Abstract

The persistent nature of lead (Pb) and cadmium (Cd) in the environment severely affects plant growth and yield. Conversely, plants acquire zinc (Zn) from the soil for their vital physiological and biochemical functions. However, the interplay and coordination between essential and toxic metals for their uptake and translocation and the putative underlying epigenetic mechanisms have not yet been investigated in maize. Here, we report that the presence of Zn facilitates the accumulation and transport of Pb and Cd in the aerial parts of the maize plants. Moreover, the Zn, Pb, and Cd interplay specifically interferes with the uptake and translocation of other divalent metals, such as calcium and magnesium. Zn, Pb, and Cd, individually and in combinations, differentially regulate the expression of DNA methyltransferases, thus alter the DNA methylation levels at the promoter of Zinc-regulated transporters, Iron-regulated transporter-like Protein (ZIP) genes to regulate their expression. Furthermore, the expression of histone deacetylases (HDACs) varies greatly in response to individual and combined metals, and HDACs expression showed a negative correlation with ZIP transporters. Our study highlights the implication of DNA methylation and histone acetylation in regulating the metal stress tolerance dynamics through Zn transporters and warns against the excessive use of Zn fertilizers in metal contaminated soils.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Presence of Zn facilitates accumulation and transport of Pb and Cd in maize aerial parts.

Taxon
MaizeZea mayst0
Organ / stage
aerial partse1
Treatment
presence of Zne1
Outcome
accumulation and transport of Pb and Cde1
Direction
facilitatese1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e1

“the presence of Zn facilitates the accumulation and transport of Pb and Cd in the aerial parts of the maize plants”

✓ located verbatim in the source · abstract, characters 442–556 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Zn, Pb and Cd together interfere with uptake and translocation of calcium and magnesium in maize.

Taxon
MaizeZea mayst0
Treatment
Zn, Pb, and Cd interplaye2
Outcome
uptake and translocation of other divalent metals, such as calcium and magnesiume2
Direction
interferes withe2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e2

“the Zn, Pb, and Cd interplay specifically interferes with the uptake and translocation of other divalent metals, such as calcium and magnesium”

✓ located verbatim in the source · abstract, characters 568–710 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Zn, Pb and Cd individually and in combination differentially regulate DNA methyltransferase expression in maize.

Taxon
MaizeZea mayst0
Treatment
Zn, Pb, and Cd, individually and in combinationse3
Gene
DNA methyltransferasese3
Outcome
expression of DNA methyltransferasese3
Direction
differentially regulatee3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e3

“Zn, Pb, and Cd, individually and in combinations, differentially regulate the expression of DNA methyltransferases”

✓ located verbatim in the source · abstract, characters 712–826 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Zn, Pb and Cd individually and in combination alter DNA methylation at the promoter of ZIP genes in maize.

Taxon
MaizeZea mayst0
Treatment
Zn, Pb, and Cd, individually and in combinationse3
Gene
ZIPe4
Outcome
DNA methylation levels at the promoter of Zinc-regulated transporterse4
Direction
altere4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e3

“Zn, Pb, and Cd, individually and in combinations, differentially regulate the expression of DNA methyltransferases”

✓ located verbatim in the source · abstract, characters 712–826 · show in text ↑
e4

“thus alter the DNA methylation levels at the promoter of Zinc-regulated transporters, Iron-regulated transporter-like Protein (ZIP) genes to regulate their expression”

✓ located verbatim in the source · abstract, characters 828–994 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Histone deacetylase (HDAC) expression in maize varies greatly with individual and combined metals.

Taxon
MaizeZea mayst0
Treatment
individual and combined metalse5
Gene
histone deacetylases (HDACs)e5
Outcome
expression of histone deacetylases (HDACs)e5
Direction
varies greatlye5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e5

“the expression of histone deacetylases (HDACs) varies greatly in response to individual and combined metals”

✓ located verbatim in the source · abstract, characters 1009–1116 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

HDAC expression is negatively correlated with ZIP transporter expression in maize.

Taxon
MaizeZea mayst0
Gene
ZIP transporterse6
Outcome
HDACs expressione6
Direction
negative correlatione6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e6

“HDACs expression showed a negative correlation with ZIP transporters”

✓ located verbatim in the source · abstract, characters 1122–1190 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors advise against excessive Zn fertilizer use on metal-contaminated soils.

Taxon
MaizeZea mayst0
Outcome
excessive use of Zn fertilizerse7
Setting
metal contaminated soilse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e7

“warns against the excessive use of Zn fertilizers in metal contaminated soils”

✓ located verbatim in the source · abstract, characters 1350–1427 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors highlight DNA methylation and histone acetylation in regulating metal stress tolerance through Zn transporters in maize.

Taxon
MaizeZea mayst0
Gene
Zn transporterse1
Outcome
metal stress tolerance dynamicse1
Qualifier
DNA methylation and histone acetylatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in Maize”

✓ located verbatim in the source · title, characters 148–156 · show in text ↑
e1

“Our study highlights the implication of DNA methylation and histone acetylation in regulating the metal stress tolerance dynamics through Zn transporters”

✓ located verbatim in the source · abstract, characters 1192–1345 · show in text ↑

lead atom · nutrient: content · Zea mays (maize)Results differ

15 papers: 1 positive, 14 negative or no effect

13 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. no effect

11 papers more in this group

See all 15 papers →

zinc atom · nutrient: content · Zea mays (maize)Results differ

235 papers: 199 positive, 36 negative or no effect

35 papers in the same direction as this paper · 199 in the opposite direction

  1. positive
  2. positive
  3. positive

231 papers more in this group

See all 235 papers →

zinc atom · molecular: metabolites · Zea mays (maize)Positive and negative results

44 papers: 36 positive, 8 negative or no effect

7 papers in the same direction as this paper · 36 in the opposite direction

  1. positive
  2. positive
  3. positive

40 papers more in this group

See all 44 papers →

cadmium atom · nutrient: content · Zea mays (maize)Positive and negative results

46 papers: 6 positive, 40 negative or no effect

39 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. positive
  3. positive

42 papers more in this group

See all 46 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.