Paper · 2022 · Life

Transcriptome and Metabolome Analysis of Upland Cotton (Gossypium hirsutum) Seed Pretreatment with MgSO4 in Response to Salinity Stress

Wei Ren; Li Chen; Qian Wang; et al.

8
claims
15
verbatim quotes
8
citations
3
research areas
✓
Open access · cc-by

Abstract

Upland cotton (Gossypium hirsutum) is a salt-tolerant crop that can withstand high salinity levels without showing signs of harm to the plant. However, the plant is more prone to salinity stress at the germination stage and a poor germination as well as poor crop stand lead to a weak productivity. It is possible to obtain a comprehensive picture of the cotton seedling germination and establishment against salt stress by examining dynamic changes in the transcriptomic and metabolomic profiles. The reported study employed a pretreatment of cotton seeds by soaking them in 0.2% Magnesium Sulphate (MgSO4) solution at room temperature for 4, 8, and 12 h. The analysis of variance based on the studied traits emergence rate, above and underground plant parts’ fresh weight measured, displayed significant differences of the three treatments compared with the control. A total of 28,801 and 264 differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) were discovered to code for biological processes such as response to salt stress, cellular response to salt stress, abscisic acid receptor PYR/PYL, regulation of seed growth and germination, and auxin-activated signaling pathways. A large amount of ethylene-responsive transcription factors (ERF) was identified (1235) as differentially expressed, followed by bHLH (252), WRKY (96), MYB (202), GATA (81), RABA (64), DIVARICATA (28), and MADs-box (26) in treated seedling samples. Functional enrichment analysis revealed the significant roles in the hormones and signal transduction, carbohydrates metabolism, and biosynthesis of amino acids, promoting salt stress tolerance. Our results indicated positive effects of MgSO4 at 4 h treatment on seedling germination and growth, seemingly by activating certain growth-regulating enzymes (auxins, gibberellins, jasmonates, abscisic acid, and salicylic acid) and metabolites (phenolic acids, flavonoids, and akaloids). Such pretreatment of MgSO4 on seeds would be beneficial in future cotton management under saline conditions to enhance good crop stand and productivity.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Three MgSO4 soaking durations differed significantly from control for emergence and fresh weight traits.

Treatment
three treatmentse0
Outcome
emergence rate, above and underground plant parts’ fresh weighte0
Comparator
controle0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The analysis of variance based on the studied traits emergence rate, above and underground plant parts’ fresh weight measured, displayed significant differences of the three treatments compared with the control.”

✓ located verbatim in the source · abstract, characters 657–868 · show in text ↑
t0

“cotton”

✓ located after whitespace/quote normalisation · title, characters 48–54 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The analysis identified 28,801 differentially expressed genes.

Outcome
differentially expressed genes (DEGs)e0
Value
28,801e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 28,801 and 264 differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) were discovered”

✓ located verbatim in the source · abstract, characters 869–998 · show in text ↑
t0

“cotton”

✓ located after whitespace/quote normalisation · title, characters 48–54 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The analysis identified 264 differentially accumulated metabolites.

Outcome
differentially accumulated metabolites (DAMs)e0
Value
264e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 28,801 and 264 differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) were discovered”

✓ located verbatim in the source · abstract, characters 869–998 · show in text ↑
t0

“cotton”

✓ located after whitespace/quote normalisation · title, characters 48–54 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Treated seedlings had 1235 differentially expressed ERF transcription factors.

Gene
ethylene-responsive transcription factors (ERF)e0
Outcome
differentially expressede0
Value
1235e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A large amount of ethylene-responsive transcription factors (ERF) was identified (1235) as differentially expressed”

✓ located verbatim in the source · abstract, characters 1214–1329 · show in text ↑
t0

“cotton”

✓ located after whitespace/quote normalisation · title, characters 48–54 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Treated seedlings also showed differentially expressed bHLH, WRKY, MYB, GATA, RABA, DIVARICATA, and MADs-box factors.

Outcome
bHLHe0
Value
252e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“followed by bHLH (252), WRKY (96), MYB (202), GATA (81), RABA (64), DIVARICATA (28), and MADs-box (26) in treated seedling samples”

✓ located verbatim in the source · abstract, characters 1331–1461 · show in text ↑
t0

“cotton”

✓ located after whitespace/quote normalisation · title, characters 48–54 · show in text ↑
Mechanismauthor interpretationoriginal resultsignificant (as stated)measured

Claim · model-written summary

Enrichment implicated hormones, signal transduction, carbohydrate metabolism, and amino acid biosynthesis in salt tolerance.

Outcome
salt stress tolerancee0
Qualifier
hormones and signal transduction, carbohydrates metabolism, and biosynthesis of amino acidse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Functional enrichment analysis revealed the significant roles in the hormones and signal transduction, carbohydrates metabolism, and biosynthesis of amino acids, promoting salt stress tolerance.”

✓ located verbatim in the source · abstract, characters 1463–1657 · show in text ↑
t0

“cotton”

✓ located after whitespace/quote normalisation · title, characters 48–54 · show in text ↑
Intervention effectauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Four-hour MgSO4 pretreatment positively affected seedling germination and growth.

Treatment
MgSO4 at 4 h treatmente0
Outcome
seedling germination and growthe0
Direction
positive effectse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Our results indicated positive effects of MgSO4 at 4 h treatment on seedling germination and growth”

✓ located verbatim in the source · abstract, characters 1658–1757 · show in text ↑
t0

“cotton”

✓ located after whitespace/quote normalisation · title, characters 48–54 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors recommend MgSO4 seed pretreatment for future cotton management under saline conditions.

Treatment
pretreatment of MgSO4 on seedse0
Outcome
good crop stand and productivitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Such pretreatment of MgSO4 on seeds would be beneficial in future cotton management under saline conditions to enhance good crop stand and productivity.”

✓ located verbatim in the source · abstract, characters 1947–2099 · show in text ↑

magnesium sulfate · growth · Gossypium hirsutum (cotton)Results differ

10 papers: 8 positive, 2 negative or no effect

7 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

6 papers more in this group

See all 10 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.