Paper · 2022 · Frontiers in Plant Science

WGCNA analysis revealing molecular mechanism that bio-organic fertilizer improves pear fruit quality by increasing sucrose accumulation and reducing citric acid metabolism

Zhonghua Wang; Han Yang; Yanwei Ma; et al.

12
claims
24
verbatim quotes
27
citations
4
research areas
✓
Open access · cc-by

Abstract

It’s been long known that the application of organic fertilizer (OF) and bio-organic fertilizer (BF) which containing beneficial microorganisms to pear trees can both significantly improve fruit quality and yield. In order to reveal the mechanism of BF and OF regulating fruit growth and quality in pear, the effects of BF and OF on the photosynthetic characteristics and the accumulation of major sugars and organic acids of the pear fruit were quantified compared with chemical fertilizer (CF). Additionally, the molecular mechanisms regulating pear fruit development and quality were studied through transcriptome analysis. The three treatments were conducted based on the same amounts of nitrogen supply. The results showed that compared with CF, BF and OF treatments increased the fruit yield, and also significantly improved the photosynthesis efficiency in pear. BF and OF both significantly increased the sucrose content but significantly decreased the fructose and glucose content within the pear fruit. The amount of malic acid was significantly higher in OF treatment. Compared with CF and OF, BF significantly increased the sugar-acid ratio and thus improved the fruit quality. Transcriptome analysis and weighted correlation network analysis (WGCNA) revealed that the sugar metabolism of fruits applied with the BF was enhanced compared with those applied with CF or OF. More specifically, the expression of SDH (Sorbitol dehydrogenase) was higher in BF, which converts sorbitol into fructose. For both of the OF and BF, the transcript abundance of sugar transporter genes was significantly increased, such as SOT (Sorbitol transporter) , SUT14 (Sugar transport 14) , UDP-GLUT4 (UDP-glucose transporter 4) , UDP-SUT (UDP-sugar transporter), SUC4 (Sucrose transport 4), SUT7 (Sugar transporter 7), SWEET10 and SWEET15 (Bidirectional sugar transporter) , which ensures sugar transportation. The genes involved in organic acid metabolism showed decreased transcripts abundance in both BF and OF treatments, such as VAP (Vesicle-associated protein) and cyACO (Cytosolic aconitase) , which reduce the conversion from succinate to citric acid, and decrease the conversion from citric acid to malic acid in the TCA cycle (Tricarboxylic Acid cycle) through Pept6 (Oligopeptide transporter). In conclusion, the application of BF and OF improved fruit quality by regulating the expression of sugar and organic acid metabolism-related genes and thus altering the sugar acid metabolism. Both BF and OF promote sucrose accumulation and citric acid degradation in fruits, which may be an important reason for improving pear fruit quality. The possible mechanism of bio-organic fertilizer to improve fruit quality was discussed.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bio-organic fertilizer (BF) and organic fertilizer (OF) increased pear fruit yield compared with chemical fertilizer (CF).

Treatment
BF and OF treatmentse1
Outcome
fruit yielde1
Direction
increasede1
Comparator
CFe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“compared with CF, BF and OF treatments increased the fruit yield, and also significantly improved the photosynthesis efficiency in pear”

✓ located verbatim in the source · abstract, characters 733–868 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

BF and OF significantly improved photosynthesis efficiency in pear compared with CF.

Treatment
BF and OF treatmentse1
Outcome
photosynthesis efficiencye1
Direction
improvede1
Comparator
CFe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“compared with CF, BF and OF treatments increased the fruit yield, and also significantly improved the photosynthesis efficiency in pear”

✓ located verbatim in the source · abstract, characters 733–868 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

BF and OF both significantly increased sucrose content in pear fruit.

Organ / stage
pear fruite1
Treatment
BF and OFe1
Outcome
sucrose contente1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“BF and OF both significantly increased the sucrose content but significantly decreased the fructose and glucose content within the pear fruit”

✓ located verbatim in the source · abstract, characters 870–1011 · show in text ↑
Intervention effectobservedoriginal resultmixedsignificant (as stated)measured

Claim · model-written summary

BF and OF both significantly decreased fructose and glucose content in pear fruit.

Organ / stage
pear fruite1
Treatment
BF and OFe1
Outcome
fructose and glucose contente1
Direction
decreasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“BF and OF both significantly increased the sucrose content but significantly decreased the fructose and glucose content within the pear fruit”

✓ located verbatim in the source · abstract, characters 870–1011 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

The amount of malic acid was significantly higher in the OF treatment.

Treatment
OF treatmente1
Outcome
amount of malic acide1
Direction
highere1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“The amount of malic acid was significantly higher in OF treatment”

✓ located verbatim in the source · abstract, characters 1013–1078 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Compared with CF and OF, BF significantly increased the sugar-acid ratio and thus improved fruit quality.

Treatment
BFe1
Outcome
sugar-acid ratioe1
Direction
increasede1
Comparator
CF and OFe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“Compared with CF and OF, BF significantly increased the sugar-acid ratio and thus improved the fruit quality”

✓ located verbatim in the source · abstract, characters 1080–1188 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Sugar metabolism of fruits given BF was enhanced compared with those given CF or OF.

Treatment
BFe1
Outcome
sugar metabolisme1
Direction
enhancede1
Comparator
CF or OFe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“the sugar metabolism of fruits applied with the BF was enhanced compared with those applied with CF or OF”

✓ located verbatim in the source · abstract, characters 1277–1382 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Expression of SDH (sorbitol dehydrogenase) was higher in BF.

Treatment
BFe1
Gene
SDH (Sorbitol dehydrogenase)e1
Outcome
expression of SDHe1
Direction
highere1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“the expression of SDH (Sorbitol dehydrogenase) was higher in BF”

✓ located verbatim in the source · abstract, characters 1403–1466 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

For both OF and BF, transcript abundance of sugar transporter genes was significantly increased.

Treatment
OF and BFe1
Gene
sugar transporter genese1
Outcome
transcript abundancee1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“For both of the OF and BF, the transcript abundance of sugar transporter genes was significantly increased”

✓ located verbatim in the source · abstract, characters 1507–1613 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Genes involved in organic acid metabolism showed decreased transcript abundance in both BF and OF treatments.

Treatment
both BF and OF treatmentse1
Gene
genes involved in organic acid metabolisme1
Outcome
transcripts abundancee1
Direction
decreasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“The genes involved in organic acid metabolism showed decreased transcripts abundance in both BF and OF treatments”

✓ located verbatim in the source · abstract, characters 1902–2015 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Application of BF and OF improved fruit quality by regulating expression of sugar and organic acid metabolism-related genes and thereby altering sugar-acid metabolism.

Treatment
application of BF and OFe1
Gene
sugar and organic acid metabolism-related genese1
Outcome
fruit qualitye1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“the application of BF and OF improved fruit quality by regulating the expression of sugar and organic acid metabolism-related genes and thus altering the sugar acid metabolism”

✓ located verbatim in the source · abstract, characters 2311–2486 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

BF and OF promote sucrose accumulation and citric acid degradation in fruits, which may be an important reason for the improved pear fruit quality.

Treatment
BF and OFe1
Compound
sucrosee1
Outcome
improving pear fruit qualitye1
Qualifier
citric acid degradatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pear fruit quality”

✓ located verbatim in the source · title, characters 82–100 · show in text ↑
e1

“Both BF and OF promote sucrose accumulation and citric acid degradation in fruits, which may be an important reason for improving pear fruit quality”

✓ located verbatim in the source · abstract, characters 2488–2636 · show in text ↑

fertilization · molecular: metabolites · Pyrus communis (pear)Positive and negative results

18 papers: 13 positive, 5 negative or no effect

12 papers in the same direction as this paper · 5 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

14 papers more in this group

See all 18 papers →

fertilization · yield · Pyrus communis (pear)Positive and negative results

36 papers: 32 positive, 4 negative or no effect

31 papers in the same direction as this paper · 2 in the opposite direction · 2 reporting no difference from an alternative

  1. no effect
  2. no effect
  3. no effect

32 papers more in this group

See all 36 papers →

fertilization · physiology: photosynthesis · Pyrus communis (pear)Results agree

5 papers: 5 positive, 0 negative or no effect

4 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

fertilization · quality: sugar starch · Pyrus communis (pear)Results agree

10 papers: 10 positive, 0 negative or no effect

9 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.