Paper · 2022 · BMC Plant Biology

Niche differentiation modulates metabolites abundance and composition in silicon fertilizer amended soil during sugarcane growth

Nyumah Fallah; Ziqin Pang; Fei Dong; et al.

11
claims
26
verbatim quotes
8
citations
2
research areas
✓
Open access · cc-by

Abstract

BACKGROUND: As one of the vital crops globally, sugarcane (Saccharum officinarum L.) has been one of model crops for conducting metabolome research. Although many studies have focused on understanding bioactive components in specific sugarcane tissues, crucial questions have been left unanswered about the response of metabolites to niche differentiation such as different sugarcane tissues (leaf, stem and root), and soil regions (rhizosphere and bulk) under silicon (Si) amended soils. Here, nontargeted metabolite profiling method was leveraged to assess the similarities and differences in the abundance and community composition of metabolites in the different sugarcane and soil compartments. Identify the compartment-specific expression patterns of metabolites, and their association with cane agronomic traits and edaphic factors. We also investigated the response of sugarcane agronomic traits and edaphic factors to Si amended soil. RESULTS: We found that Si fertilizer exhibited the advantages of overwhelmingly promoting the height and theoretical production of cane, and profoundly increased soil Si content by 24.8 and 27.0%, while soil available potassium (AK) was enhanced by 3.07 and 2.67 folds in the bulk and rhizosphere soils, respectively. It was also noticed that available phosphorus (AP) in the rhizosphere soil tremendously increased by 105.5%. We detected 339 metabolites in 30 samples using LC-MS/MS analyses, 161 of which were classified and annotated, including organooxygen compounds (19.9%), carboxylic acids and derivatives (15.5%), fatty acyls (15.5%), flavonoids (4.4%), phenols (4.4%), and benzene and substituted derivatives (3.7%). In addition, the total percentages covered by these core metabolites in each compartment ranged from 94.0% (bulk soil) to 93.4% (rhizosphere soil), followed by 87.4% (leaf), 81.0% (root) and 80.5% (stem), suggesting that these bioactive compounds may have migrated from the belowground tissues and gradually filtered in various aboveground niches of the plant. We also observed that the variations and enrichment of metabolites abundance and community were compartment-specific. Furthermore, some key bioactive compounds were markedly associated with plant growth parameters and soil edaphic. CONCLUSION: Taken together, we hypothesized that Si utilization can exhibit the advantage of enhancing edaphic factors and cane agronomic traits, and variations in metabolites community are tissue-specific.

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Claims 11

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Si fertilizer increased sugarcane height and theoretical cane production

Taxon
sugarcanee1
Treatment
Si fertilizere2
Outcome
height and theoretical production of canee2
Direction
promotinge2

Not reportedComparator

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e2

“Si fertilizer exhibited the advantages of overwhelmingly promoting the height and theoretical production of cane”

✓ located verbatim in the source · abstract, characters 967–1079 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Si fertilizer increased soil Si content by 24.8 and 27.0%

Taxon
sugarcanee1
Treatment
Si fertilizere2
Outcome
soil Si contente3
Direction
increasede3
Value
24.8 and 27.0%e3

Not reportedComparator

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e2

“Si fertilizer exhibited the advantages of overwhelmingly promoting the height and theoretical production of cane”

✓ located verbatim in the source · abstract, characters 967–1079 · show in text ↑
e3

“profoundly increased soil Si content by 24.8 and 27.0%”

✓ located verbatim in the source · abstract, characters 1085–1139 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Si fertilizer enhanced soil available potassium in bulk and rhizosphere soils

Taxon
sugarcanee1
Treatment
Si fertilizere2
Outcome
soil available potassium (AK)e4
Direction
enhancede4
Value
3.07 and 2.67 foldse4
Setting
bulk and rhizosphere soilse4

Not reportedComparator

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e2

“Si fertilizer exhibited the advantages of overwhelmingly promoting the height and theoretical production of cane”

✓ located verbatim in the source · abstract, characters 967–1079 · show in text ↑
e4

“while soil available potassium (AK) was enhanced by 3.07 and 2.67 folds in the bulk and rhizosphere soils, respectively”

✓ located verbatim in the source · abstract, characters 1141–1260 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Si fertilizer increased available phosphorus in the rhizosphere soil by 105.5%

Taxon
sugarcanee1
Treatment
Si fertilizere2
Outcome
available phosphorus (AP) in the rhizosphere soile5
Direction
increasede5
Value
105.5%e5
Setting
rhizosphere soile5

Not reportedComparator

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e2

“Si fertilizer exhibited the advantages of overwhelmingly promoting the height and theoretical production of cane”

✓ located verbatim in the source · abstract, characters 967–1079 · show in text ↑
e5

“available phosphorus (AP) in the rhizosphere soil tremendously increased by 105.5%”

✓ located verbatim in the source · abstract, characters 1287–1369 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

339 metabolites were detected in 30 sugarcane and soil samples

Taxon
sugarcanee1
Outcome
metabolitese6
Value
339e6

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e6

“We detected 339 metabolites in 30 samples using LC-MS/MS analyses”

✓ located verbatim in the source · abstract, characters 1371–1436 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

161 of the detected metabolites were classified and annotated

Taxon
sugarcanee1
Outcome
classified and annotatede7
Value
161e7

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e7

“161 of which were classified and annotated”

✓ located verbatim in the source · abstract, characters 1438–1480 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Core metabolites covered 94.0% of metabolites in the bulk soil and 93.4% in the rhizosphere soil

Taxon
sugarcanee1
Outcome
total percentages covered by these core metabolitese2
Value
94.0% (bulk soil) to 93.4% (rhizosphere soil)e2
Setting
bulk soile2

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e2

“the total percentages covered by these core metabolites in each compartment ranged from 94.0% (bulk soil) to 93.4% (rhizosphere soil)”

✓ located verbatim in the source · abstract, characters 1683–1816 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Core metabolites covered 87.4% in leaf, 81.0% in root and 80.5% in stem

Taxon
sugarcanee1
Organ / stage
leafe3
Outcome
total percentages covered by these core metabolitese2
Value
87.4% (leaf), 81.0% (root) and 80.5% (stem)e3

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e2

“the total percentages covered by these core metabolites in each compartment ranged from 94.0% (bulk soil) to 93.4% (rhizosphere soil)”

✓ located verbatim in the source · abstract, characters 1683–1816 · show in text ↑
e3

“followed by 87.4% (leaf), 81.0% (root) and 80.5% (stem)”

✓ located verbatim in the source · abstract, characters 1818–1873 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

Bioactive compounds may have migrated from belowground tissues and gradually filtered into aboveground niches

Taxon
sugarcanee1
Organ / stage
belowground tissuese0
Outcome
gradually filtered in various aboveground nichese0

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e0

“suggesting that these bioactive compounds may have migrated from the belowground tissues and gradually filtered in various aboveground niches of the plant”

✓ located verbatim in the source · abstract, characters 1875–2029 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Variations and enrichment of metabolite abundance and community were compartment-specific

Taxon
sugarcanee1
Outcome
variations and enrichment of metabolites abundance and communitye0
Qualifier
compartment-specifice0

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e0

“the variations and enrichment of metabolites abundance and community were compartment-specific”

✓ located verbatim in the source · abstract, characters 2053–2147 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Some key bioactive compounds were markedly associated with plant growth parameters and soil edaphic factors

Taxon
sugarcanee1
Compound
bioactive compoundse0
Outcome
plant growth parameterse0
Direction
associatede0

Verbatim

e1

“sugarcane (Saccharum officinarum L.)”

✓ located verbatim in the source · abstract, characters 48–84 · show in text ↑
e0

“some key bioactive compounds were markedly associated with plant growth parameters and soil edaphic”

✓ located verbatim in the source · abstract, characters 2162–2261 · show in text ↑

silicon atom · yield · Saccharum officinarum (sugarcane)Results differ

21 papers: 19 positive, 2 negative or no effect

18 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

17 papers more in this group

See all 21 papers →

fertilization · yield · Saccharum officinarum (sugarcane)Positive and negative results

346 papers: 312 positive, 34 negative or no effect

311 papers in the same direction as this paper · 28 in the opposite direction · 6 reporting no difference from an alternative

  1. no effect
  2. negative
  3. no effect

342 papers more in this group

See all 346 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.