Paper · 2024 · Biochemical Journal

Pepper catalase: a broad analysis of its modulation during fruit ripening and by nitric oxide

Salvador González-Gordo; Javier López-Jaramillo; Marta Rodríguez-Ruiz; et al.

11
claims
21
verbatim quotes
17
citations
3
research areas
✓
Open access · cc-by

Abstract

Catalase is a major antioxidant enzyme located in plant peroxisomes that catalyzes the decomposition of H2O2. Based on our previous transcriptomic (RNA-Seq) and proteomic (iTRAQ) data at different stages of pepper (Capsicum annuum L.) fruit ripening and after exposure to nitric oxide (NO) enriched atmosphere, a broad analysis has allowed us to characterize the functioning of this enzyme. Three genes were identified, and their expression was differentially modulated during ripening and by NO gas treatment. A dissimilar behavior was observed in the protein expression of the encoded protein catalases (CaCat1-CaCat3). Total catalase activity was down-regulated by 50% in ripe (red) fruits concerning immature green fruits. This was corroborated by non-denaturing polyacrylamide gel electrophoresis, where only a single catalase isozyme was identified. In vitro analyses of the recombinant CaCat3 protein exposed to peroxynitrite (ONOO-) confirmed, by immunoblot assay, that catalase underwent a nitration process. Mass spectrometric analysis identified that Tyr348 and Tyr360 were nitrated by ONOO-, occurring near the active center of catalase. The data indicate the complex regulation at gene and protein levels of catalase during the ripening of pepper fruits, with activity significantly down-regulated in ripe fruits. Nitration seems to play a key role in this down-regulation, favoring an increase in H2O2 content during ripening. This pattern can be reversed by the exogenous NO application. While plant catalases are generally reported to be tetrameric, the analysis of the protein structure supports that pepper catalase has a favored quaternary homodimer nature. Taken together, data show that pepper catalase is down-regulated during fruit ripening, becoming a target of tyrosine nitration, which provokes its inhibition.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

Three pepper catalase genes were identified.

Taxon
peppere1
Gene
genese0
Outcome
genes were identifiede0
Value
Threee0

Verbatim

e0

“Three genes were identified”

✓ located verbatim in the source · abstract, characters 391–418 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Catalase gene expression was differentially modulated during ripening and NO treatment.

Taxon
peppere1
Organ / stage
ripeninge0
Treatment
NO gas treatmente0
Outcome
expression was differentially modulatede0

Verbatim

e0

“their expression was differentially modulated during ripening and by NO gas treatment”

✓ located verbatim in the source · abstract, characters 424–509 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

CaCat1 through CaCat3 protein expression showed dissimilar behavior.

Taxon
peppere1
Gene
CaCat1-CaCat3e0
Outcome
protein expressione0
Direction
dissimilare0

Verbatim

e0

“A dissimilar behavior was observed in the protein expression of the encoded protein catalases (CaCat1-CaCat3)”

✓ located verbatim in the source · abstract, characters 511–620 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Catalase activity was 50% lower in ripe red fruit than immature green fruit.

Taxon
peppere1
Organ / stage
ripe (red) fruitse0
Gene
catalasee0
Outcome
Total catalase activitye0
Direction
down-regulatede0
Value
50%e0
Comparator
immature green fruitse0

Verbatim

e0

“Total catalase activity was down-regulated by 50% in ripe (red) fruits concerning immature green fruits”

✓ located verbatim in the source · abstract, characters 622–725 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Gel electrophoresis identified one catalase isozyme.

Taxon
peppere1
Gene
catalasee0
Outcome
catalase isozyme was identifiede0
Value
a singlee0

Verbatim

e0

“only a single catalase isozyme was identified”

✓ located verbatim in the source · abstract, characters 809–854 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Peroxynitrite exposure nitrated recombinant CaCat3.

Taxon
peppere1
Treatment
peroxynitrite (ONOO-)e0
Gene
CaCat3e0
Outcome
catalase underwent a nitration processe0

Not reportedComparatorDirection

Verbatim

e0

“recombinant CaCat3 protein exposed to peroxynitrite (ONOO-) confirmed, by immunoblot assay, that catalase underwent a nitration process”

✓ located verbatim in the source · abstract, characters 881–1016 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Peroxynitrite nitrated Tyr348 near catalase active center.

Taxon
peppere1
Treatment
ONOO-e0
Gene
Tyr348e0
Outcome
Tyr348 and Tyr360 were nitratede0
Qualifier
near the active center of catalasee0

Not reportedComparatorDirection

Verbatim

e0

“Tyr348 and Tyr360 were nitrated by ONOO-, occurring near the active center of catalase”

✓ located verbatim in the source · abstract, characters 1062–1148 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Peroxynitrite nitrated Tyr360 near catalase active center.

Taxon
peppere1
Treatment
ONOO-e0
Gene
Tyr360e0
Outcome
Tyr348 and Tyr360 were nitratede0
Qualifier
near the active center of catalasee0

Not reportedComparatorDirection

Verbatim

e0

“Tyr348 and Tyr360 were nitrated by ONOO-, occurring near the active center of catalase”

✓ located verbatim in the source · abstract, characters 1062–1148 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Nitration was proposed to inhibit catalase and increase H2O2 during ripening.

Taxon
peppere1
Outcome
increase in H2O2 contente0
Direction
increasee0
Qualifier
Nitration seems to play a key role in this down-regulatione0

Verbatim

e0

“Nitration seems to play a key role in this down-regulation, favoring an increase in H2O2 content during ripening”

✓ located verbatim in the source · abstract, characters 1327–1439 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Intervention effectauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Exogenous NO could reverse the ripening pattern.

Taxon
peppere1
Treatment
exogenous NO applicatione0
Outcome
patterne0
Direction
reversede0

Not reportedComparator

Verbatim

e0

“This pattern can be reversed by the exogenous NO application”

✓ located verbatim in the source · abstract, characters 1441–1501 · show in text ↑
e1

“pepper (Capsicum annuum L.) fruit ripening”

✓ located verbatim in the source · abstract, characters 207–249 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

Pepper catalase structure favored a homodimer.

Taxon
peppere0
Gene
catalasee0
Outcome
favored quaternary homodimer naturee0

Verbatim

e0

“pepper catalase has a favored quaternary homodimer nature”

✓ located verbatim in the source · abstract, characters 1618–1675 · show in text ↑