Paper · 2024 · Postharvest Biology and Technology

New insights into the relationship between clock genes and ascorbic acid metabolism in spinach during pre- and postharvest periods

Manasikan Thammawong; Anupama Shomodder; Shinichiro Kuroki; et al.

11
claims
22
verbatim quotes
1
citations
2
research areas
✓
Open access · cc-by

Abstract

In this study, the effects of light and dark conditions on the expression of candidate clock genes ( SoLHY , SoPRR5 , and SoTOC1 ), photoreceptor genes ( SoPHYA , SoPHYB , and SoZTL ), ascorbic acid (AsA) synthesis genes ( SoVTC2 and SoGLDH ), an AsA degradation gene ( SoAPX ), an AsA regeneration gene ( SoMDHAR ), and AsA content of spinach during the pre- and postharvest periods were investigated. The AsA content decreased under constant dark storage, whereas the AsA content was efficiently maintained under a light/dark cycle. Gene expression with rhythmic signals confirmed by the JTK_CYCLE method (P ≤ 0.05) was used for the analysis of partial correlation coefficients. Strong correlations between SoLHY and SoVTC2 were observed under all investigated conditions. AsA synthesis regulation via the clock gene LHY was stable and likely not altered by harvesting stress and/or external light stimuli. After harvesting, SoPRR5 was negatively correlated with SoVTC2. This finding suggested that a reduction in the SoPRR5 expression level might be an alternative way to induce/maintain AsA content during storage. Additionally, the expression of the photoreceptor genes SoPHYA and SoZTL was moderately correlated with that of SoVTC2 during cultivation. Surprisingly, these correlations were not observed during storage even in the presence of light. Instead, SoPHYA expression was correlated with that of another AsA synthesis gene, SoGLDH, under light/dark storage. Moreover, under constant dark storage, SoZTL expression showed a strong correlation with SoVTC2 . The considerable variation in the relationship between the expression levels of AsA-related genes and photoreceptor genes during cultivation and storage indicates the contribution of light regulators to maintaining AsA rhythm in spinach. In summary, this study is the first to suggest possible crosslinking of external signals (light/dark), photoreceptor genes, clock genes, and AsA metabolism genes, which are related to changes in the quality of spinach during the pre- and postharvest periods. • Circadian clock and photoreceptors are involved in AsA metabolism in spinach. • Harvesting practices and storage conditions altered the rhythmicity of gene expression in spinach. • The SoLHY clock gene was strongly correlated with SoVTC2 before and after spinach harvest. • The SoPRR5 clock gene was negatively correlated with AsA synthesis after harvesting. • Harvesting practices influenced the relationship between photoreceptors and AsA synthesis genes.

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Claims 11

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

AsA content of spinach decreased under constant dark storage compared with a light/dark cycle.

Treatment
constant dark storagee1
Outcome
AsA contente1
Direction
decreasede1
Comparator
light/dark cyclee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e1

“The AsA content decreased under constant dark storage, whereas the AsA content was efficiently maintained under a light/dark cycle”

✓ located verbatim in the source · abstract, characters 403–533 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

SoLHY and SoVTC2 expression were strongly correlated in spinach under all investigated conditions.

Gene
SoLHYe2
Outcome
correlations between SoLHY and SoVTC2e2
Qualifier
under all investigated conditionse2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e2

“Strong correlations between SoLHY and SoVTC2 were observed under all investigated conditions”

✓ located verbatim in the source · abstract, characters 681–773 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

After harvesting, SoPRR5 was negatively correlated with SoVTC2 in spinach.

Treatment
After harvestinge3
Gene
SoPRR5e3
Outcome
correlated with SoVTC2e3
Direction
negativelye3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e3

“After harvesting, SoPRR5 was negatively correlated with SoVTC2”

✓ located verbatim in the source · abstract, characters 909–971 · show in text ↑
Mechanismhypothesisoriginal resultpositivebasis n/a

Claim · model-written summary

Reducing SoPRR5 expression might be an alternative way to induce or maintain AsA content during storage.

Gene
SoPRR5e4
Outcome
AsA contente4
Qualifier
might be an alternative waye4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e4

“This finding suggested that a reduction in the SoPRR5 expression level might be an alternative way to induce/maintain AsA content during storage”

✓ located verbatim in the source · abstract, characters 973–1117 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

SoPHYA and SoZTL expression was moderately correlated with SoVTC2 expression during cultivation in spinach.

Gene
SoPHYA and SoZTLe5
Outcome
moderately correlated with that of SoVTC2e5
Qualifier
during cultivatione5

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e5

“the expression of the photoreceptor genes SoPHYA and SoZTL was moderately correlated with that of SoVTC2 during cultivation”

✓ located verbatim in the source · abstract, characters 1133–1256 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

During storage, the correlations of photoreceptor genes with SoVTC2 were not observed even in the presence of light.

Treatment
during storage even in the presence of lighte6
Outcome
these correlationse6

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e6

“Surprisingly, these correlations were not observed during storage even in the presence of light”

✓ located verbatim in the source · abstract, characters 1258–1353 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

SoPHYA expression was correlated with SoGLDH expression under light/dark storage in spinach.

Treatment
under light/dark storagee7
Gene
SoPHYAe7
Outcome
correlated with that of another AsA synthesis gene, SoGLDHe7

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e7

“Instead, SoPHYA expression was correlated with that of another AsA synthesis gene, SoGLDH, under light/dark storage”

✓ located verbatim in the source · abstract, characters 1355–1470 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Under constant dark storage, SoZTL expression showed a strong correlation with SoVTC2 in spinach.

Treatment
under constant dark storagee1
Gene
SoZTLe1
Outcome
a strong correlation with SoVTC2e1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e1

“under constant dark storage, SoZTL expression showed a strong correlation with SoVTC2”

✓ located verbatim in the source · abstract, characters 1482–1567 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

Light regulators likely contribute to maintaining AsA rhythm in spinach.

Outcome
AsA rhythme1
Qualifier
contribution of light regulatorse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e1

“indicates the contribution of light regulators to maintaining AsA rhythm in spinach”

✓ located verbatim in the source · abstract, characters 1723–1806 · show in text ↑
Mechanismauthor interpretationoriginal resultno effectmeasured

Claim · model-written summary

AsA synthesis regulation via the clock gene LHY was stable and likely not altered by harvesting stress or external light stimuli.

Gene
LHYe1
Outcome
AsA synthesis regulatione1
Qualifier
likely not altered by harvesting stress and/or external light stimulie1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e1

“AsA synthesis regulation via the clock gene LHY was stable and likely not altered by harvesting stress and/or external light stimuli”

✓ located verbatim in the source · abstract, characters 775–907 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Harvesting practices and storage conditions altered the rhythmicity of gene expression in spinach.

Treatment
Harvesting practices and storage conditionse1
Outcome
rhythmicity of gene expressione1
Direction
alterede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Spinacia oleracea
Spinacia oleracea · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“ascorbic acid metabolism in spinach”

✓ located verbatim in the source · title, characters 59–94 · show in text ↑
e1

“Harvesting practices and storage conditions altered the rhythmicity of gene expression in spinach”

✓ located verbatim in the source · abstract, characters 2149–2246 · show in text ↑

storage · molecular: metabolites · Spinacia oleracea (spinach)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

4 in the opposite direction

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

light · molecular: metabolites · Spinacia oleracea (spinach)Positive and negative results

29 papers: 16 positive, 13 negative or no effect

12 papers in the same direction as this paper · 16 in the opposite direction

  1. positive
  2. positive
  3. positive

25 papers more in this group

See all 29 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.