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Observationobservedreview summarybasis n/a

Claim · model-written summary

Following fertilisation the Arabidopsis zygote divides asymmetrically to generate apical and basal lineages, establishing the apical-basal axis that defines future shoot and root poles.

Taxon
ArabidopsisArabidopsist0
Outcome
apical and basal lineagese0

Verbatim

t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 37–48
e0

“the zygote divides asymmetrically to generate apical and basal lineages, establishing the apical-basal axis that defines future shoot and root poles”

✓ located verbatim in the source · abstract, characters 221–369

Title

Imaging and genetic toolbox to study Arabidopsis embryogenesis

David Babić; Milan Župunski; Jiří Friml New Phytologist 2026. doi:10.1111/nph.71072

Other claims from this paper (5)
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A detailed protocol isolates early Arabidopsis proembryos and separates their apical and basal cell lineages for lineage-specific transcriptomes, compared with a previously established tobacco protocol.

Taxon
ArabidopsisArabidopsise1
Organ / stage
early Arabidopsis proembryose1
Outcome
separating apical and basal cell lineagese1
Comparator
a protocol for isolating apical cell and basal cell for cDNA library construction in tobaccoe2

Verbatim

e1

“a detailed protocol for isolating early Arabidopsis proembryos and separating apical and basal cell lineages of proembryos”

✓ located verbatim in the source · abstract, characters 831–953
e2

“Previously, we have established a protocol for isolating apical cell and basal cell for cDNA library construction in tobacco”

✓ located verbatim in the source · abstract, characters 583–707

Title

Isolation of living apical and basal cell lineages of early proembryos for transcriptome analysis

Xuemei Zhou; Ce Shi; Peng Zhao; et al. Plant Reproduction 2018. doi:10.1007/s00497-018-00353-6

Method / resourceobservedoriginal resultpositivebasis n/a

Claim · model-written summary

The study provides a lineage-specific transcriptome resource for apical and basal lineages.

Taxon
ArabidopsisArabidopsise0
Outcome
lineage-specific transcriptome resourcee1
Value
genome-wide scalee1

Verbatim

e0

“In Arabidopsis, a zygote”

✓ located verbatim in the source · abstract, characters 0–24
e1

“This work also provides a valuable lineage-specific transcriptome resource to elucidate the molecular pathways for divergence of apical and basal cell lineages at genome-wide scale.”

✓ located verbatim in the source · abstract, characters 948–1129

Title

Cell lineage-specific transcriptome analysis for interpreting cell fate specification of proembryos

Xuemei Zhou; Zhenzhen Liu; Kun Shen; et al. Nature Communications 2020. doi:10.1038/s41467-020-15189-w

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Apical and basal cell lineages have distinct molecular pathways during specification.

Taxon
ArabidopsisArabidopsise0
Organ / stage
cell lineagee1
Outcome
distinct molecular pathwayse1

Verbatim

e0

“In Arabidopsis, a zygote undergoes asymmetrical cell division”

✓ located verbatim in the source · abstract, characters 0–61
e1

“uncovering distinct molecular pathways during cell lineage specification.”

✓ located verbatim in the source · abstract, characters 376–449

Title

Cell lineage-specific transcriptome analysis for interpreting cell fate specification of proembryos

Xuemei Zhou; Zhenzhen Liu; Kun Shen; et al. Nature Communications 2020. doi:10.1038/s41467-020-15189-w

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Apical and basal lineage divisions were not strictly synchronized.

Organ / stage
globular stage of embryogenesise0
Outcome
not strictly synchronized between the apical and basal lineagese0

Verbatim

e0

“The following cell divisions are not strictly synchronized between the apical and basal lineages, exhibiting non-stereotypic patterns up to the globular stage of embryogenesis.”

✓ located verbatim in the source · abstract, characters 847–1023
t0

“3D imaging reveals robustness and plasticity of cell division in rice early embryogenesis”

✓ located verbatim in the source · title, characters 0–89

Title

3D imaging reveals robustness and plasticity of cell division in rice early embryogenesis

Moeno Tezuka; Takunori Kitta; Haruka Kumakura; et al. Plant and Cell Physiology 2025. doi:10.1093/pcp/pcaf171

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Apical cell lineages could never generate a new suspensor.

Taxon
angiospermsMagnoliopsidae0
Organ / stage
apical cell lineagese2
Outcome
generate a new suspensore2

Verbatim

e0

“In angiosperms, the first zygotic division usually gives rise to two daughter cells with distinct morphologies and developmental fates”

✓ located verbatim in the source · abstract, characters 0–134
e2

“We also demonstrated that the isolated apical cell could develop into a small globular embryo, both in vivo and in vitro, after artificial dysfunction of the basal cell; however, these growing apical cell lineages could never generate a new suspensor”

✓ located verbatim in the source · abstract, characters 705–955

Title

The autonomous cell fate specification of basal cell lineage: the initial round of cell fate specification occurs at the two‐celled proembryo stage

Liang‐Huan Qu; Xuemei Zhou; Xinbo Li; et al. The Plant Journal 2017. doi:10.1111/tpj.13629

Other claims from this paper (4)
Observationobservedoriginal resultmeasured

Claim · model-written summary

An isolated apical cell developed into a small globular embryo after artificial dysfunction of the basal cell.

Taxon
angiospermsMagnoliopsidae0
Organ / stage
apical celle2
Outcome
develop into a small globular embryoe2
Qualifier
after artificial dysfunction of the basal celle2

Verbatim

e0

“In angiosperms, the first zygotic division usually gives rise to two daughter cells with distinct morphologies and developmental fates”

✓ located verbatim in the source · abstract, characters 0–134
e2

“We also demonstrated that the isolated apical cell could develop into a small globular embryo, both in vivo and in vitro, after artificial dysfunction of the basal cell; however, these growing apical cell lineages could never generate a new suspensor”

✓ located verbatim in the source · abstract, characters 705–955

Title

The autonomous cell fate specification of basal cell lineage: the initial round of cell fate specification occurs at the two‐celled proembryo stage

Liang‐Huan Qu; Xuemei Zhou; Xinbo Li; et al. The Plant Journal 2017. doi:10.1111/tpj.13629

Other claims from this paper (4)

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