Search claims · PlantClaims

Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Morphological phenotypes of some arr mutants suggest complex regulatory interactions and gene-specific functions among family members.

Taxon: ArabidopsisArabidopsise2
Material: some arr mutantse1
Outcome: morphological phenotypese1
Qualifier: suggest complex regulatory interactions and gene-specific functions among family memberse1

Verbatim

t0
“Type-A Arabidopsis Response Regulators”
✓ located verbatim in the source · title, characters 0–38

e2
“Arabidopsis (Arabidopsis thaliana)”
✓ located verbatim in the source · abstract, characters 7–41

e1
“morphological phenotypes of some arr mutants suggest complex regulatory interactions and gene-specific functions among family members”
✓ located verbatim in the source · abstract, characters 1070–1203

Title

Type-A Arabidopsis Response Regulators Are Partially Redundant Negative Regulators of Cytokinin Signaling[W]

Jennifer P.C. To; Georg Haberer; Fernando J. Ferreira; et al. The Plant Cell 2004. doi:10.1105/tpc.018978

Other claims from this paper (6)

Intervention effect Single arr mutants did not differ from wild-type Arabidopsis in cytokinin assays.
Intervention effect Double and higher order arr mutants showed progressively increasing sensitivity to cytokinin.
Mechanism Type-A ARRs are suggested to act as negative regulators of cytokinin responses, with functional overlap among them.
Intervention effect Induction of cytokinin primary response genes was amplified in arr mutants of Arabidopsis.
Observation Spatial patterns of ARR gene expression in Arabidopsis were consistent with partially redundant function in cytokinin signaling.
Intervention effect Arr mutants of Arabidopsis showed altered red light sensitivity.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Complex interaction predominated for TPH between C1 and C3 at 52.20%.

Taxon: Sugarcanet0
Outcome: complex type interactionse1
Direction: predominantlye1
Value: 52.20%e0
Qualifier: TPHe0

Verbatim

e0
“TPH (52.20%)”
✓ located verbatim in the source · abstract, characters 2148–2160

e1
“C1 x C3 cycle pair presented predominantly complex type interactions”
✓ located verbatim in the source · abstract, characters 2047–2115

t0
“Sugarcane”
✓ located verbatim in the source · title, characters 41–50

Title

Genotype x Harvest Cycles Interaction in Sugarcane on the South Coast of Pernambuco

Paulo Rocha Machado; Francisco José De Oliveira; Gheysa Coelho Silva; et al. Journal of Experimental Agriculture International 2019. doi:10.9734/jeai/2019/v33i630158

Other claims from this paper (18)

Observation TCH significantly fell from the first to second harvest cycle.
Observation Only UFRPE11 had a significant TCH decrease in the third cycle.
Observation Seven named genotypes exceeded all commercial varieties in TPH.
Observation ATR did not differ significantly among genotypes in the third cycle.
Observation Simple GxC interaction predominated for TCH between C1 and C2 at 67.91%.
Observation Simple GxC interaction predominated for TPH between C1 and C2 at 69.35%.
Observation Complex GxC interaction predominated for ATR between C1 and C2 at 56.42%.
Observation Simple interaction predominated for TCH between C2 and C3 at 62.85%.
Observation Simple interaction predominated for TPH between C2 and C3 at 62.41%.
Observation The C2 by C3 interaction was not significant for ATR.
Observation Complex interaction predominated for TCH between C1 and C3 at 50.42%.
Observation Complex interaction predominated for ATR between C1 and C3 at 59.66%.
Observation The authors interpret simple GxC interaction as enabling genetic gain from selection across subsequent harvest cycles.
Observation The authors interpret complex GxC interaction as reducing predictability of genetic gain.
Observation The authors conclude local selection favors genetic gain in a few cycles.
Observation The authors conclude local selection does not favor high adaptability and phenotypic stability.
Recommendation The authors recommend testing in several environments.
Recommendation The authors recommend UFRPE06 and UFRPE10 for further selection under southern coastal conditions.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Complex interaction predominated for ATR between C1 and C3 at 59.66%.

Taxon: Sugarcanet0
Outcome: complex type interactionse1
Direction: predominantlye1
Value: 59.66%e0
Qualifier: ATRe0

Verbatim

e0
“ATR (59.66%)”
✓ located verbatim in the source · abstract, characters 2165–2177

e1
“C1 x C3 cycle pair presented predominantly complex type interactions”
✓ located verbatim in the source · abstract, characters 2047–2115

t0
“Sugarcane”
✓ located verbatim in the source · title, characters 41–50

Title

Genotype x Harvest Cycles Interaction in Sugarcane on the South Coast of Pernambuco

Paulo Rocha Machado; Francisco José De Oliveira; Gheysa Coelho Silva; et al. Journal of Experimental Agriculture International 2019. doi:10.9734/jeai/2019/v33i630158

Other claims from this paper (18)

Observation TCH significantly fell from the first to second harvest cycle.
Observation Only UFRPE11 had a significant TCH decrease in the third cycle.
Observation Seven named genotypes exceeded all commercial varieties in TPH.
Observation ATR did not differ significantly among genotypes in the third cycle.
Observation Simple GxC interaction predominated for TCH between C1 and C2 at 67.91%.
Observation Simple GxC interaction predominated for TPH between C1 and C2 at 69.35%.
Observation Complex GxC interaction predominated for ATR between C1 and C2 at 56.42%.
Observation Simple interaction predominated for TCH between C2 and C3 at 62.85%.
Observation Simple interaction predominated for TPH between C2 and C3 at 62.41%.
Observation The C2 by C3 interaction was not significant for ATR.
Observation Complex interaction predominated for TCH between C1 and C3 at 50.42%.
Observation Complex interaction predominated for TPH between C1 and C3 at 52.20%.
Observation The authors interpret simple GxC interaction as enabling genetic gain from selection across subsequent harvest cycles.
Observation The authors interpret complex GxC interaction as reducing predictability of genetic gain.
Observation The authors conclude local selection favors genetic gain in a few cycles.
Observation The authors conclude local selection does not favor high adaptability and phenotypic stability.
Recommendation The authors recommend testing in several environments.
Recommendation The authors recommend UFRPE06 and UFRPE10 for further selection under southern coastal conditions.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Complex interaction predominated for TCH between C1 and C3 at 50.42%.

Taxon: Sugarcanet0
Outcome: complex type interactionse0
Direction: predominantlye0
Value: 50.42%e0
Qualifier: TCHe0

Verbatim

e0
“C1 x C3 cycle pair presented predominantly complex type interactions for all variables TCH (50.42%)”
✓ located verbatim in the source · abstract, characters 2047–2146

t0
“Sugarcane”
✓ located verbatim in the source · title, characters 41–50

Title

Genotype x Harvest Cycles Interaction in Sugarcane on the South Coast of Pernambuco

Paulo Rocha Machado; Francisco José De Oliveira; Gheysa Coelho Silva; et al. Journal of Experimental Agriculture International 2019. doi:10.9734/jeai/2019/v33i630158

Other claims from this paper (18)

Observation TCH significantly fell from the first to second harvest cycle.
Observation Only UFRPE11 had a significant TCH decrease in the third cycle.
Observation Seven named genotypes exceeded all commercial varieties in TPH.
Observation ATR did not differ significantly among genotypes in the third cycle.
Observation Simple GxC interaction predominated for TCH between C1 and C2 at 67.91%.
Observation Simple GxC interaction predominated for TPH between C1 and C2 at 69.35%.
Observation Complex GxC interaction predominated for ATR between C1 and C2 at 56.42%.
Observation Simple interaction predominated for TCH between C2 and C3 at 62.85%.
Observation Simple interaction predominated for TPH between C2 and C3 at 62.41%.
Observation The C2 by C3 interaction was not significant for ATR.
Observation Complex interaction predominated for TPH between C1 and C3 at 52.20%.
Observation Complex interaction predominated for ATR between C1 and C3 at 59.66%.
Observation The authors interpret simple GxC interaction as enabling genetic gain from selection across subsequent harvest cycles.
Observation The authors interpret complex GxC interaction as reducing predictability of genetic gain.
Observation The authors conclude local selection favors genetic gain in a few cycles.
Observation The authors conclude local selection does not favor high adaptability and phenotypic stability.
Recommendation The authors recommend testing in several environments.
Recommendation The authors recommend UFRPE06 and UFRPE10 for further selection under southern coastal conditions.

Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors suggested Lamarckiana hybrid behavior may arise from complex system interactions.

Taxon: LamarckianaLamarckianae0
Outcome: behavior exhibited by Lamarckiana and its segregants in hybridizatione0
Qualifier: complex system interactionse0

Verbatim

e0
“the type of behavior exhibited by Lamarckiana and its segregants in hybridization may be referred to such complex system interactions.”
✓ located verbatim in the source · abstract, characters 2208–2342

Title

Mendelian Factor Differences Versus Reaction System Contrasts in Heredity. II

T. H. Goodspeed; R. E. Clausen The American Naturalist 1917. doi:10.1086/279589

Other claims from this paper (6)

Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer feedback depends on complex interactions within a larger microbial community.

Taxon: Plantt0
Outcome: PSFse3
Qualifier: complex interactionse3

Verbatim

t0
“Plant–Soil Feedbacks”
✓ located verbatim in the source · title, characters 4–24

e3
“PSFs result from complex interactions that occur within the context of a much larger soil microbial community whose composition is determined by factors associated with 'site' or year, such as soil pH, soil type, and weather.”
✓ located verbatim in the source · abstract, characters 938–1163

Title

Are Plant–Soil Feedbacks Caused by Many Weak Microbial Interactions?

Julia K. Aaronson; Andrew Kulmatiski; Leslie E. Forero; et al. Biology 2023. doi:10.3390/biology12111374

Other claims from this paper (6)

Observation Microbial community composition differed by site and year.
Observation Microbial composition differed between bulk and rhizosphere soils.
Observation Rhizosphere community composition differed among plant species.
Association Plant biomass correlated with two multivariate axes.
Mechanism The authors infer that many weak plant-microbe interactions cause feedback.
Observation The authors suggest plant-soil feedbacks may vary and be difficult to reproduce.

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Interactions among these residues determine AmKAT1 potassium dependence.

Taxon: Ammopiptanthus mongolicusAmmopiptanthus mongolicust0
Outcome: K(+) dependencee0
Qualifier: complex interactions occur among these residuese0

Verbatim

e0
“complex interactions occur among these residues, and it is these interactions that determine its K(+) dependence”
✓ located verbatim in the source · abstract, characters 664–776

t0
“Ammopiptanthus mongolicus”
✓ located verbatim in the source · abstract, characters 159–184

Title

Complex interactions among residues within pore region determine the K⁺ dependence of a KAT1‐type potassium channel AmKAT1

Guangzhe Yang; Hervé Sentenac; Anne‐Aliénor Véry; et al. The Plant Journal 2015. doi:10.1111/tpj.12891

Other claims from this paper (5)

Observationobservedoriginal resultmeasured

Claim · model-written summary

EXO70 isoforms, exocyst components, and VAP members had cell-type-specific interactions in leaf transcript data.

Taxon: Arabidopsis thalianaArabidopsis thalianat0
Gene: EXO70 isoformse0
Outcome: cell-type-specific interactionse0

Verbatim

t0
“Arabidopsis thaliana”
✓ located verbatim in the source · title, characters 70–90

e0
“We identified cell-type-specific interactions among exocyst subunit EXO70 isoforms, exocyst complex components, and vesicle-associated protein (VAP) members”
✓ located verbatim in the source · abstract, characters 514–670

Title

The expression pattern of EXO70 subunits in single-cell stereo-seq of Arabidopsis thaliana leaves using coexistence network analysis

Xin Yu; Jingmin Shang Scientific Reports 2026. doi:10.1038/s41598-026-44501-9

Other claims from this paper (2)

Association EXO70A1, EXO70H7, and SEC3A significantly co-occurred in spongy mesophyll cells.
Method / resource Coexistence networks supported analysis of low-expression gene families in complex tissues.

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ATP enhanced stromal complex formation in wild type and ae1.2.

Taxon: maizeZea mayst0
Material: ae1.2e0
Treatment: ATPe0
Outcome: formation of stromal protein complexese0
Direction: enhancede0

Not reportedComparator

Verbatim

e0
“The formation of stromal protein complexes in the wild-type and ae1.2 was strongly enhanced by ATP”
✓ located verbatim in the source · abstract, characters 1432–1530

t0
“maize”
✓ located verbatim in the source · title, characters 53–58

Title

Allelic variants of the amylose extender mutation of maize demonstrate phenotypic variation in starch structure resulting from modified protein-protein interactions

F. Liu; Z. Ahmed; E. A. Lee; et al. Journal of Experimental Botany 2011. doi:10.1093/jxb/err341

Other claims from this paper (13)

Observation Inactive SBEIIb in ae1.2 lacked a 28 amino acid peptide.
Observation Inactive SBEIIb could not bind amylopectin.
Observation ae1.2 starch had altered granule morphology and physicochemical characteristics relative to ae1.1 and wild type.
Observation ae1.2 starch had altered apparent amylose content and gelatinization properties.
Observation ae1.2 starch had fewer intermediate glucan chains than ae1.1.
Observation Protein-complex organization differed in ae1.2 versus ae1.1 and wild type.
Observation Starch granule-bound protein composition also differed.
Intervention effect Phosphatase treatment disrupted stromal complexes.
Observation Inactive SBEIIb was phosphorylated as monomer and with starch synthase isoforms.
Observation Inactive SBEIIb was associated with the granule despite its inability to bind starch directly.
Observation Granule-bound SBEIIb in wild type and ae1.2 was phosphorylated.
Observation Granule-bound SBEI in ae1.2 was phosphorylated.
Mechanism The authors concluded protein complexes contribute to starch granule structure.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Crosses revealed complex interactions in defense regulation.

Taxon: Nicotiana attenuataNicotiana attenuatae0 e1 e2 e3
Material: linese0 e1 e2 e3
Outcome: complex interactions in the patterns of regulatione0 e1 e2 e3

Verbatim

e0
“Crossing of the lines revealed complex interactions in the patterns of regulation.”
✓ located verbatim in the source · abstract, characters 739–821

e1
“We identified and stably silenced four distinct DCL genes by RNAi in Nicotiana attenuata (Torrey ex. Watson), a model for the study of plant-herbivore interactions.”
✓ located verbatim in the source · abstract, characters 206–370

e2
“Manduca sexta larvae performed significantly better on ir-dcl3 and ir-dcl4 plants, but not on ir-dcl2 plants compared to wild type plants.”
✓ located verbatim in the source · abstract, characters 409–547

e3
“Single ir-dcl4 and double ir-dcl2 ir-dcl3 plants were impaired in JA accumulation, while JA- Ile was increased in ir-dcl3 plants.”
✓ located verbatim in the source · abstract, characters 822–951

Title

DICER-like Proteins and Their Role in Plant-herbivore Interactions in Nicotiana attenuata

Bckv Campus 植物学报(英文版) 2012

Other claims from this paper (13)

Intervention effect Silencing DCL1 was lethal to Nicotiana attenuata.
Association Manduca sexta larvae performed significantly better on ir-dcl3 than wild type plants.
Association Manduca sexta larvae performed significantly better on ir-dcl4 than wild type plants.
Association Manduca sexta larvae did not perform significantly better on ir-dcl2 than wild type plants.
Observation Separate DCL3 and DCL4 silencing regulated herbivore resistance differently.
Observation Single ir-dcl4 plants had impaired JA accumulation.
Observation Double ir-dcl2 ir-dcl3 plants had impaired JA accumulation.
Observation JA-Ile accumulated more in ir-dcl3 plants.
Observation Ir-dcl3 plants had impaired nicotine accumulation.
Observation Ir-dcl4 plants had impaired nicotine accumulation.
Intervention effect Combined DCL2 and DCL3 or DCL4 silencing restored nicotine to wild type levels.
Observation Only ir-dcl3 plants had silenced trypsin proteinase inhibitor activity and transcripts.
Mechanism The authors conclude that DCL2, DCL3 and DCL4 interact to regulate anti-herbivore defense.

“complex type interactions”

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