By organism › Fungi › Above family level › Fungi

Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors suggest that bHLH transcription factors play conserved roles in modulating carbohydrate and lipid metabolism in fungi.

Taxon: fungiFungie0
Gene: bHLH transcription factorse0
Outcome: carbohydrate and lipid metabolisme0

Verbatim

e0
“bHLH transcription factors play conserved roles in modulating carbohydrate and lipid metabolism in fungi”
✓ located verbatim in the source · abstract, characters 1401–1505

Title

The Basic Helix–Loop–Helix Transcription Factors UvBhlh1 and UvBhlh6 Coordinate Virulence in the Rice False Smut Fungus Ustilaginoidea virens

Huijuan Cao; Hao Gong; Xiaohong Huang; et al. Molecular Plant Pathology 2026. doi:10.1111/mpp.70267

Other claims from this paper (8)

Associationobservedoriginal resultmeasured

Claim · model-written summary

Fungi in the P. notoginseng forest correlated positively with phenolic metabolites.

Taxon: fungiFungie0
Compound: phenolic metabolitese0
Outcome: fungie0
Direction: positively correlatede0
Setting: P. notoginseng foreste0

Verbatim

e0
“specific bacteria in the P. notoginseng forest were strongly positively correlated with lipids, and fungi with phenolic metabolites”
✓ located verbatim in the source · abstract, characters 1596–1727

Title

Influence of root secretions of understory Chinese herbal medicines on the characterization of inter-root microbial communities

Yuan Yang; Jianqiang Li; Bo Yang; et al. Frontiers in Plant Science 2026. doi:10.3389/fpls.2025.1697347

Other claims from this paper (14)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Healthy-soil fungal networks had 112 nodes versus 101 in diseased soils.

Taxon: fungiFungie0
Outcome: nodese0
Direction: largere0
Value: 112 nodese0
Qualifier: 101e0
Comparator: diseased soilse0

Verbatim

e0
“co-occurrence networks in healthy soils were larger and more stable, with bacteria comprising 431 nodes compared to 405 in diseased soils, and fungi comprising 112 nodes compared to 101 in diseased soils”
✓ located verbatim in the source · abstract, characters 1064–1267

Title

Fusarium wilt disease induced changes in the composition and function of the rhizosphere metabolome and microbiome in tobacco plants

Lin Yang; Wenjuan Yang; Honghao Zhang; et al. Scientific Reports 2026. doi:10.1038/s41598-026-40653-w

Other claims from this paper (17)

Observation Diseased tobacco rhizospheres had 65 differential metabolites.
Observation Forty metabolites were upregulated in diseased rhizospheres.
Observation Twenty-five metabolites were downregulated in diseased rhizospheres.
Association Three key metabolites correlated negatively with healthy soil status.
Observation Healthy soils had significantly higher bacterial OTU diversity, 3278 versus 3039.
Observation Healthy soils had significantly higher bacterial Shannon diversity, 6.72 versus 6.65.
Observation Healthy soils had significantly higher fungal OTU diversity, 919 versus 701.
Observation Healthy soils had significantly higher fungal Shannon diversity, 3.91 versus 3.44.
Observation Healthy-soil bacterial networks had 431 nodes versus 405 in diseased soils.
Observation Healthy-soil co-occurrence networks were more stable.
Observation Healthy-soil assembly shifted from deterministic processes during the first 75 days toward stochastic processes.
Observation Diseased-soil assembly was consistently deterministic.
Association Soil type influenced distribution of key microbial groups.
Observation Chloroflexi was enriched in healthy soils.
Observation Lysobacter dominated diseased soils.
Association The three key metabolites correlated positively with disease-enriched microbes.
Association The three key metabolites correlated negatively with health-associated taxa.

Observationobservedoriginal resultmeasured

Claim · model-written summary

With UNITE and ITS1, samples included 250 genera of Fungi.

Taxon: FungiFungie0
Outcome: genuse0
Value: 250 genuse0

Verbatim

e0
“With UNITE and ITS1, samples included 19 genus of Viridiplantae and 250 genus of Fungi”
✓ located verbatim in the source · abstract, characters 1163–1249

Title

Aerobiome and environmental DNA: a novel tool for monitoring biodiversity in an Alpine region

Cristofori, A.; Girardi, M.; Micheletti, D.; et al. CINECA IRIS Institutional Research Information System (Fondazione Edmund Mach) 2025

Other claims from this paper (6)

Observation Airborne eDNA showed seasonal dynamics in airborne pollen and plant biodiversity.
Observation Airborne eDNA was effective for detecting diverse plant taxa.
Observation With UNITE and ITS1, samples included 19 genera of Viridiplantae.
Method / resource ITS2 gave deeper plant identification, reaching up to 45 families.
Method / resource ITS2 gave deeper plant identification, reaching up to 82 genera.
Method / resource Molecular and microscopic plant and pollen data agreed strongly.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Sequencing of the isolated fungi identified 78 fungal operational taxonomic units.

Taxon: fungiFungie0
Outcome: fungal operational taxonomic units (OTUs)e1
Value: 78e1

Verbatim

e0
“culturable fungi”
✓ located verbatim in the source · abstract, characters 290–306

e1
“Sequencing identified 78 fungal operational taxonomic units (OTUs)”
✓ located verbatim in the source · abstract, characters 442–508

Title

Diversity and Biocontrol Potential of Fungi Associated with Cyst Nematodes and Soils in Swiss Potato Agroecosystems

Andrea Caroline Ruthes; Paul Dahlin Plants 2025. doi:10.3390/plants14243775

Other claims from this paper (9)

Observation Ascomycota made up 73% of the fungal OTUs.
Observation Sordariomycetes made up 59% of the fungal OTUs.
Observation Eurotiomycetes made up 8% of the fungal OTUs.
Observation Fusarium was the most abundant genus, followed by Clonostachys, Chaetomium and Pochonia.
Observation 28% of the isolates remained unclassified, indicating potentially novel taxa.
Intervention effect Orbilia brochopaga CH-02 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Clonostachys rosea CH-04 and CH-15 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Pochonia chlamydosporia CH-51 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect CH-02 reduced root galling of Meloidogyne incognita by 63%.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Ascomycota made up 73% of the fungal OTUs.

Taxon: fungiFungie0
Outcome: Ascomycotae1
Value: 73%e1

Verbatim

e0
“culturable fungi”
✓ located verbatim in the source · abstract, characters 290–306

e1
“predominantly belonging to Ascomycota (73%)”
✓ located verbatim in the source · abstract, characters 510–553

Title

Diversity and Biocontrol Potential of Fungi Associated with Cyst Nematodes and Soils in Swiss Potato Agroecosystems

Andrea Caroline Ruthes; Paul Dahlin Plants 2025. doi:10.3390/plants14243775

Other claims from this paper (9)

Observation Sequencing of the isolated fungi identified 78 fungal operational taxonomic units.
Observation Sordariomycetes made up 59% of the fungal OTUs.
Observation Eurotiomycetes made up 8% of the fungal OTUs.
Observation Fusarium was the most abundant genus, followed by Clonostachys, Chaetomium and Pochonia.
Observation 28% of the isolates remained unclassified, indicating potentially novel taxa.
Intervention effect Orbilia brochopaga CH-02 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Clonostachys rosea CH-04 and CH-15 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Pochonia chlamydosporia CH-51 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect CH-02 reduced root galling of Meloidogyne incognita by 63%.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Sordariomycetes made up 59% of the fungal OTUs.

Taxon: fungiFungie0
Outcome: Sordariomycetese1
Value: 59%e1

Verbatim

e0
“culturable fungi”
✓ located verbatim in the source · abstract, characters 290–306

e1
“mainly Sordariomycetes (59%)”
✓ located verbatim in the source · abstract, characters 555–583

Title

Diversity and Biocontrol Potential of Fungi Associated with Cyst Nematodes and Soils in Swiss Potato Agroecosystems

Andrea Caroline Ruthes; Paul Dahlin Plants 2025. doi:10.3390/plants14243775

Other claims from this paper (9)

Observation Sequencing of the isolated fungi identified 78 fungal operational taxonomic units.
Observation Ascomycota made up 73% of the fungal OTUs.
Observation Eurotiomycetes made up 8% of the fungal OTUs.
Observation Fusarium was the most abundant genus, followed by Clonostachys, Chaetomium and Pochonia.
Observation 28% of the isolates remained unclassified, indicating potentially novel taxa.
Intervention effect Orbilia brochopaga CH-02 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Clonostachys rosea CH-04 and CH-15 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Pochonia chlamydosporia CH-51 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect CH-02 reduced root galling of Meloidogyne incognita by 63%.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Eurotiomycetes made up 8% of the fungal OTUs.

Taxon: fungiFungie0
Outcome: Eurotiomycetese1
Value: 8%e1

Verbatim

e0
“culturable fungi”
✓ located verbatim in the source · abstract, characters 290–306

e1
“Eurotiomycetes (8%)”
✓ located verbatim in the source · abstract, characters 588–607

Title

Diversity and Biocontrol Potential of Fungi Associated with Cyst Nematodes and Soils in Swiss Potato Agroecosystems

Andrea Caroline Ruthes; Paul Dahlin Plants 2025. doi:10.3390/plants14243775

Other claims from this paper (9)

Observation Sequencing of the isolated fungi identified 78 fungal operational taxonomic units.
Observation Ascomycota made up 73% of the fungal OTUs.
Observation Sordariomycetes made up 59% of the fungal OTUs.
Observation Fusarium was the most abundant genus, followed by Clonostachys, Chaetomium and Pochonia.
Observation 28% of the isolates remained unclassified, indicating potentially novel taxa.
Intervention effect Orbilia brochopaga CH-02 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Clonostachys rosea CH-04 and CH-15 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Pochonia chlamydosporia CH-51 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect CH-02 reduced root galling of Meloidogyne incognita by 63%.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Fusarium was the most abundant genus, followed by Clonostachys, Chaetomium and Pochonia.

Taxon: fungiFungie0
Outcome: most abundant genuse1

Verbatim

e0
“culturable fungi”
✓ located verbatim in the source · abstract, characters 290–306

e1
“Fusarium was the most abundant genus, followed by Clonostachys, Chaetomium, and Pochonia”
✓ located verbatim in the source · abstract, characters 683–771

Title

Diversity and Biocontrol Potential of Fungi Associated with Cyst Nematodes and Soils in Swiss Potato Agroecosystems

Andrea Caroline Ruthes; Paul Dahlin Plants 2025. doi:10.3390/plants14243775

Other claims from this paper (9)

Observation Sequencing of the isolated fungi identified 78 fungal operational taxonomic units.
Observation Ascomycota made up 73% of the fungal OTUs.
Observation Sordariomycetes made up 59% of the fungal OTUs.
Observation Eurotiomycetes made up 8% of the fungal OTUs.
Observation 28% of the isolates remained unclassified, indicating potentially novel taxa.
Intervention effect Orbilia brochopaga CH-02 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Clonostachys rosea CH-04 and CH-15 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Pochonia chlamydosporia CH-51 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect CH-02 reduced root galling of Meloidogyne incognita by 63%.

Observationobservedoriginal resultmeasured

Claim · model-written summary

28% of the isolates remained unclassified, indicating potentially novel taxa.

Taxon: fungiFungie0
Outcome: isolates remained unclassifiede1
Value: 28%e1

Verbatim

e0
“culturable fungi”
✓ located verbatim in the source · abstract, characters 290–306

e1
“28% of isolates remained unclassified”
✓ located verbatim in the source · abstract, characters 779–816

Title

Diversity and Biocontrol Potential of Fungi Associated with Cyst Nematodes and Soils in Swiss Potato Agroecosystems

Andrea Caroline Ruthes; Paul Dahlin Plants 2025. doi:10.3390/plants14243775

Other claims from this paper (9)

Observation Sequencing of the isolated fungi identified 78 fungal operational taxonomic units.
Observation Ascomycota made up 73% of the fungal OTUs.
Observation Sordariomycetes made up 59% of the fungal OTUs.
Observation Eurotiomycetes made up 8% of the fungal OTUs.
Observation Fusarium was the most abundant genus, followed by Clonostachys, Chaetomium and Pochonia.
Intervention effect Orbilia brochopaga CH-02 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Clonostachys rosea CH-04 and CH-15 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect Pochonia chlamydosporia CH-51 significantly reduced motility, infection and root galling of Meloidogyne incognita in vitro and in planta.
Intervention effect CH-02 reduced root galling of Meloidogyne incognita by 63%.

Fungi 203 claims

203 claims