Pelliaceae 207 claims

family · order Pelliales · 7 taxa · NCBI Taxonomy ↗

7 entries

Apopellia endiviifoliaalso Pellia endiviifolia · also P. endiviifolia104 claims · 25 papers Pellia epiphyllaalso P. borealis · also Pellia borealis57 claims · 18 papers Pellia27 claims · 13 papers Apopellia megasporaalso P. megaspora11 claims · 4 papers Apopellia7 claims · 1 paper Pelliaceae3 claims · 3 papers Pellia neesiana1 claim · 1 paper

207 claims

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Observationobservedoriginal resultmeasured

Claim · model-written summary

Pellia endiviifolia had above-average Fe and Mn accumulation.

Taxon: Pellia endiviifoliaApopellia endiviifoliae0
Outcome: accumulation propertiese0

Verbatim

e0
“above-average accumulation properties of Pellia endiviifolia in relation to Fe and Mn”
✓ located verbatim in the source · abstract, characters 975–1060

Title

Accumulation of macro- and microelements in plants associated with the aquatic environment in northern Poland

Agnieszka Parzych; Jerzy Jonczak Desalination and Water Treatment 2025. doi:10.1016/j.dwt.2025.101065

Other claims from this paper (11)

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: genome assemblye1
Value: 2,914,960,273 bpe1

Verbatim

e0
“The liverwort Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 12–48

e1
“We present the genome assembly of a haploid A. endiviifolia isolate with a total size of 2,914,960,273 bp and an N50 of 468,157,909 bp”
✓ located verbatim in the source · abstract, characters 403–537

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation The transposable elements included 57 Helitrons.
Observation Copia elements comprised 8.94% of the genome.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The assembly had 99.2% BUSCO completeness and quality value 47.6.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: completenesse1
Value: 99.2% BUSCOe1
Qualifier: quality value 47.6e1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“demonstrating high completeness (99.2% BUSCO) and a high consensus quality (quality value 47.6)”
✓ located verbatim in the source · abstract, characters 539–634

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation The transposable elements included 57 Helitrons.
Observation Copia elements comprised 8.94% of the genome.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: chromosomese1
Value: 9 chromosomese1
Qualifier: 18 telomeres and 9 centromerese1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“The assembly consisted of 9 chromosomes, which included 18 telomeres and 9 centromeres (ranging from 1.9 to 5 Mbp in length)”
✓ located verbatim in the source · abstract, characters 636–760

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation The transposable elements included 57 Helitrons.
Observation Copia elements comprised 8.94% of the genome.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Annotation identified 34,615 predominantly protein-coding genes.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: genese1
Value: 34,615 genese1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“RNA sequencing-based annotation identified 34,615 genes, predominantly protein coding”
✓ located verbatim in the source · abstract, characters 762–847

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation The transposable elements included 57 Helitrons.
Observation Copia elements comprised 8.94% of the genome.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Long terminal repeat elements comprised 12.16% of transposable elements.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: long terminal repeat elementse1
Value: 12.16%e1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“The transposable elements comprised 12.16% long terminal repeat elements and 57 Helitrons”
✓ located verbatim in the source · abstract, characters 849–938

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation The transposable elements included 57 Helitrons.
Observation Copia elements comprised 8.94% of the genome.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The transposable elements included 57 Helitrons.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: Helitronse1
Value: 57 Helitronse1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“57 Helitrons”
✓ located verbatim in the source · abstract, characters 926–938

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation Copia elements comprised 8.94% of the genome.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Copia elements comprised 8.94% of the genome.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: Copiae1
Value: 8.94%e1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“the Copia and Gypsy superfamilies comprised 8.94% and 2.95% of the genome, respectively”
✓ located verbatim in the source · abstract, characters 965–1052

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation The transposable elements included 57 Helitrons.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Gypsy elements comprised 2.95% of the genome.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Outcome: Gypsye1
Value: 2.95%e1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“the Copia and Gypsy superfamilies comprised 8.94% and 2.95% of the genome, respectively”
✓ located verbatim in the source · abstract, characters 965–1052

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation The transposable elements included 57 Helitrons.
Observation Copia elements comprised 8.94% of the genome.
Observation Ty3/Gypsy was significantly enriched in centromeric regions.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.

Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Ty3/Gypsy was significantly enriched in centromeric regions.

Taxon: Apopellia endiviifoliaApopellia endiviifoliae0
Gene: Ty3/Gypsye1
Outcome: enriched in centromeric regionse1

Verbatim

e0
“Apopellia endiviifolia”
✓ located verbatim in the source · abstract, characters 26–48

e1
“The Ty3/Gypsy superfamily was significantly enriched in centromeric regions”
✓ located verbatim in the source · abstract, characters 1054–1129

Title

Giant chromosomes of a tiny plant—the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

Joanna Szablińska-Piernik; Paweł Sulima; Jakub Sawicki GigaScience 2025. doi:10.1093/gigascience/giaf145

Other claims from this paper (11)

Method / resource A haploid A. endiviifolia genome assembly was produced at 2,914,960,273 bp with N50 468,157,909 bp.
Method / resource The assembly had 99.2% BUSCO completeness and quality value 47.6.
Observation The assembly comprised nine chromosomes, 18 telomeres and nine centromeres.
Observation Annotation identified 34,615 predominantly protein-coding genes.
Observation Long terminal repeat elements comprised 12.16% of transposable elements.
Observation The transposable elements included 57 Helitrons.
Observation Copia elements comprised 8.94% of the genome.
Observation Gypsy elements comprised 2.95% of the genome.
Observation Average GC content ranged from 38.8% to 39.6%.
Observation Gene density ranged from 5.52 to 9.78 genes per 500 kbp.
Observation Synteny analysis indicated extensive rearrangements among related liverworts.