By organism › Green plants › Malvaceae › Gossypium australe

Observationobservedoriginal resultmeasured

Claim · model-written summary

GauSR45a, encoding a serine/arginine-rich RNA binding protein, was upregulated expression and underwent AS in response to Vd infection in Gossypium australe, a wild diploid cotton species highly resistant to Vd.

Taxon: Gossypium australeGossypium australee0
Interactor: Vde0pathogen
Gene: GauSR45ae0
Outcome: expressione0
Direction: upregulatede0

Verbatim

e0
“GauSR45a, encoding a serine/arginine-rich RNA binding protein, was upregulated expression and underwent AS in response to Vd infection in Gossypium australe, a wild diploid cotton species highly resistant to Vd.”
✓ located verbatim in the source · abstract, characters 411–622

t0
“SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes”
✓ located verbatim in the source · title, characters 0–119

e1
“Gossypium australe”
✓ located verbatim in the source · abstract, characters 549–567

Title

SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes

Fujie Liu; Sheng Cai; Lingjun Dai; et al. The Plant Journal 2024. doi:10.1111/tpj.16750

Other claims from this paper (8)

Observationobservedoriginal resultmeasured

Claim · model-written summary

GauSR45a, encoding a serine/arginine-rich RNA binding protein, was upregulated expression and underwent AS in response to Vd infection in Gossypium australe, a wild diploid cotton species highly resistant to Vd.

Taxon: Gossypium australeGossypium australee0
Interactor: Vde0pathogen
Gene: GauSR45ae0
Outcome: ASe0

Verbatim

e0
“GauSR45a, encoding a serine/arginine-rich RNA binding protein, was upregulated expression and underwent AS in response to Vd infection in Gossypium australe, a wild diploid cotton species highly resistant to Vd.”
✓ located verbatim in the source · abstract, characters 411–622

t0
“SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes”
✓ located verbatim in the source · title, characters 0–119

e1
“Gossypium australe”
✓ located verbatim in the source · abstract, characters 549–567

Title

SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes

Fujie Liu; Sheng Cai; Lingjun Dai; et al. The Plant Journal 2024. doi:10.1111/tpj.16750

Other claims from this paper (8)

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing GauSR45a substantially reduced the splicing ratio of Vd-induced immune-associated genes, including GauBAK1 (BRI1-associated kinase 1) and GauCERK1 (chitin elicitor receptor kinase 1).

Taxon: Gossypium australeGossypium australee1
Treatment: Silencing GauSR45ae0
Interactor: Vde0pathogen
Gene: GauBAK1e0
Outcome: splicing ratioe0
Direction: reducede0

Not reportedComparator

Verbatim

e0
“Silencing GauSR45a substantially reduced the splicing ratio of Vd-induced immune-associated genes, including GauBAK1 (BRI1-associated kinase 1) and GauCERK1 (chitin elicitor receptor kinase 1).”
✓ located verbatim in the source · abstract, characters 623–816

t0
“SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes”
✓ located verbatim in the source · title, characters 0–119

e1
“Gossypium australe”
✓ located verbatim in the source · abstract, characters 549–567

Title

SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes

Fujie Liu; Sheng Cai; Lingjun Dai; et al. The Plant Journal 2024. doi:10.1111/tpj.16750

Other claims from this paper (8)

Observationobservedoriginal resultmeasured

Claim · model-written summary

GauSR45a binds to the GAAGA motif that is commonly found in the pre-mRNA of genes essential for PTI, ETI, and defense.

Taxon: Gossypium australeGossypium australee1
Gene: GauSR45ae0
Outcome: binds to the GAAGA motife0

Verbatim

e0
“GauSR45a binds to the GAAGA motif that is commonly found in the pre-mRNA of genes essential for PTI, ETI, and defense.”
✓ located verbatim in the source · abstract, characters 817–935

t0
“SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes”
✓ located verbatim in the source · title, characters 0–119

e1
“Gossypium australe”
✓ located verbatim in the source · abstract, characters 549–567

Title

SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes

Fujie Liu; Sheng Cai; Lingjun Dai; et al. The Plant Journal 2024. doi:10.1111/tpj.16750

Other claims from this paper (8)

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

V. dahliae induced GauCCD7 expression in Gossypium australe.

Taxon: Gossypium australeGossypium australee0
Treatment: V. dahliaee0
Interactor: V. dahliaeVerticillium dahliaee0pathogen
Gene: GauCCD7e0
Outcome: expression of the CAROTENOID CLEAVAGE DIOXYGENASE 7 (GauCCD7) genee0
Direction: inducese0

Not reportedComparator

Verbatim

e0
“V. dahliae induces the expression of the CAROTENOID CLEAVAGE DIOXYGENASE 7 (GauCCD7) gene involved in strigolactone (SL) biosynthesis in Gossypium australe”
✓ located verbatim in the source · abstract, characters 107–262

Title

Strigolactones positively regulate Verticillium wilt resistance in cotton via crosstalk with other hormones

Feifei Yi; Aosong Song; Kai Cheng; et al. PLANT PHYSIOLOGY 2023. doi:10.1093/plphys/kiad053

Other claims from this paper (14)

Intervention effect rac-GR24 enhanced cotton resistance to Verticillium wilt.
Intervention effect TIS108 decreased cotton resistance to Verticillium wilt.
Intervention effect GbCCD7 knockdown decreased island cotton wilt resistance.
Intervention effect GbCCD8b knockdown decreased island cotton wilt resistance.
Intervention effect GbCCD8b overexpression increased upland cotton wilt resistance.
Observation Arabidopsis SL mutants defective in CCD7 and CCD8 orthologs were susceptible.
Intervention effect Arabidopsis GbCCD7 overexpressors were more resistant than wild type.
Intervention effect Arabidopsis GbCCD8b overexpressors were more resistant than wild type.
Intervention effect JA and ABA signaling genes were upregulated in wild type cotton roots following rac-GR24 and infection.
Intervention effect JA and ABA signaling genes were downregulated in GbCCD7 silenced cotton roots.
Intervention effect JA and ABA signaling genes were downregulated in GbCCD8b silenced cotton roots.
Mechanism GbMYC2 suppressed GbCCD7 and GbCCD8b expression through promoter binding.
Intervention effect GbCCD7 silencing impaired infection induced ROS accumulation in cotton.
Intervention effect GbCCD8b silencing impaired infection induced ROS accumulation in cotton.

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The G. australe genome assembly reached a contig N50 of 1.83 Mb.

Taxon: G. australeGossypium australee1
Outcome: contig N50e2
Value: 1.83 Mbe2

Verbatim

e1
“Here, we sequenced the G. australe genome”
✓ located verbatim in the source · abstract, characters 273–314

e2
“acquired a high-quality reference genome with a contig N50 of 1.83 Mb”
✓ located verbatim in the source · abstract, characters 400–469

Title

Genome sequencing of the Australian wild diploid species Gossypium australe highlights disease resistance and delayed gland morphogenesis

Yingfan Cai; Xiaoyan Cai; Qinglian Wang; et al. Plant Biotechnology Journal 2019. doi:10.1111/pbi.13249

Other claims from this paper (12)

Method / resource The G. australe genome reached a scaffold N50 of 143.60 Mb.
Observation Repeat sequences make up 73.5% of the G. australe genome.
Observation G. australe repeat content differs from that of G. arboreum (85.39%).
Observation G. australe repeat content differs from that of G. hirsutum (69.86%).
Observation G. australe repeat content differs from that of G. barbadense (69.83%).
Observation The G. australe genome shows closer collinearity with G. arboreum than with G. raimondii.
Observation G. australe has undergone less extensive genome reorganization than G. arboreum.
Mechanism Selection and transcriptomic analyses implicate GauCCD7 and GauCBP1 in disease-resistance responses.
Intervention effect Verticillium dahliae induces expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Plant hormones strigolactone (GR24), salicylic acid and methyl jasmonate induce expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Knockdown of the homologues of GauCCD7 and GauCBP1 significantly reduced resistance to Verticillium dahliae in a G. barbadense cultivar.
Intervention effect Knockdown of GauGRAS1 caused a glandless phenotype in partial tissues of G. australe.

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The G. australe genome reached a scaffold N50 of 143.60 Mb.

Taxon: G. australeGossypium australee1
Outcome: scaffold N50e2
Value: 143.60 Mbe2

Verbatim

e1
“Here, we sequenced the G. australe genome”
✓ located verbatim in the source · abstract, characters 273–314

e2
“a scaffold N50 of 143.60 Mb”
✓ located verbatim in the source · abstract, characters 474–501

Title

Genome sequencing of the Australian wild diploid species Gossypium australe highlights disease resistance and delayed gland morphogenesis

Yingfan Cai; Xiaoyan Cai; Qinglian Wang; et al. Plant Biotechnology Journal 2019. doi:10.1111/pbi.13249

Other claims from this paper (12)

Method / resource The G. australe genome assembly reached a contig N50 of 1.83 Mb.
Observation Repeat sequences make up 73.5% of the G. australe genome.
Observation G. australe repeat content differs from that of G. arboreum (85.39%).
Observation G. australe repeat content differs from that of G. hirsutum (69.86%).
Observation G. australe repeat content differs from that of G. barbadense (69.83%).
Observation The G. australe genome shows closer collinearity with G. arboreum than with G. raimondii.
Observation G. australe has undergone less extensive genome reorganization than G. arboreum.
Mechanism Selection and transcriptomic analyses implicate GauCCD7 and GauCBP1 in disease-resistance responses.
Intervention effect Verticillium dahliae induces expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Plant hormones strigolactone (GR24), salicylic acid and methyl jasmonate induce expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Knockdown of the homologues of GauCCD7 and GauCBP1 significantly reduced resistance to Verticillium dahliae in a G. barbadense cultivar.
Intervention effect Knockdown of GauGRAS1 caused a glandless phenotype in partial tissues of G. australe.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Repeat sequences make up 73.5% of the G. australe genome.

Taxon: G. australeGossypium australee1
Outcome: repeat sequencese2
Value: 73.5%e2

Verbatim

e1
“Here, we sequenced the G. australe genome”
✓ located verbatim in the source · abstract, characters 273–314

e2
“We found that 73.5% of the G. australe genome is composed of various repeat sequences”
✓ located verbatim in the source · abstract, characters 503–588

Title

Genome sequencing of the Australian wild diploid species Gossypium australe highlights disease resistance and delayed gland morphogenesis

Yingfan Cai; Xiaoyan Cai; Qinglian Wang; et al. Plant Biotechnology Journal 2019. doi:10.1111/pbi.13249

Other claims from this paper (12)

Method / resource The G. australe genome assembly reached a contig N50 of 1.83 Mb.
Method / resource The G. australe genome reached a scaffold N50 of 143.60 Mb.
Observation G. australe repeat content differs from that of G. arboreum (85.39%).
Observation G. australe repeat content differs from that of G. hirsutum (69.86%).
Observation G. australe repeat content differs from that of G. barbadense (69.83%).
Observation The G. australe genome shows closer collinearity with G. arboreum than with G. raimondii.
Observation G. australe has undergone less extensive genome reorganization than G. arboreum.
Mechanism Selection and transcriptomic analyses implicate GauCCD7 and GauCBP1 in disease-resistance responses.
Intervention effect Verticillium dahliae induces expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Plant hormones strigolactone (GR24), salicylic acid and methyl jasmonate induce expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Knockdown of the homologues of GauCCD7 and GauCBP1 significantly reduced resistance to Verticillium dahliae in a G. barbadense cultivar.
Intervention effect Knockdown of GauGRAS1 caused a glandless phenotype in partial tissues of G. australe.

Observationobservedoriginal resultmeasured

Claim · model-written summary

G. australe repeat content differs from that of G. arboreum (85.39%).

Taxon: G. australeGossypium australee1
Outcome: repeat sequencese2
Qualifier: 85.39%e3
Comparator: G. arboreume3

Verbatim

e1
“Here, we sequenced the G. australe genome”
✓ located verbatim in the source · abstract, characters 273–314

e2
“We found that 73.5% of the G. australe genome is composed of various repeat sequences”
✓ located verbatim in the source · abstract, characters 503–588

e3
“differing from those of G. arboreum (85.39%)”
✓ located verbatim in the source · abstract, characters 590–634

Title

Genome sequencing of the Australian wild diploid species Gossypium australe highlights disease resistance and delayed gland morphogenesis

Yingfan Cai; Xiaoyan Cai; Qinglian Wang; et al. Plant Biotechnology Journal 2019. doi:10.1111/pbi.13249

Other claims from this paper (12)

Method / resource The G. australe genome assembly reached a contig N50 of 1.83 Mb.
Method / resource The G. australe genome reached a scaffold N50 of 143.60 Mb.
Observation Repeat sequences make up 73.5% of the G. australe genome.
Observation G. australe repeat content differs from that of G. hirsutum (69.86%).
Observation G. australe repeat content differs from that of G. barbadense (69.83%).
Observation The G. australe genome shows closer collinearity with G. arboreum than with G. raimondii.
Observation G. australe has undergone less extensive genome reorganization than G. arboreum.
Mechanism Selection and transcriptomic analyses implicate GauCCD7 and GauCBP1 in disease-resistance responses.
Intervention effect Verticillium dahliae induces expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Plant hormones strigolactone (GR24), salicylic acid and methyl jasmonate induce expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Knockdown of the homologues of GauCCD7 and GauCBP1 significantly reduced resistance to Verticillium dahliae in a G. barbadense cultivar.
Intervention effect Knockdown of GauGRAS1 caused a glandless phenotype in partial tissues of G. australe.

Observationobservedoriginal resultmeasured

Claim · model-written summary

G. australe repeat content differs from that of G. hirsutum (69.86%).

Taxon: G. australeGossypium australee1
Outcome: repeat sequencese2
Qualifier: 69.86%e3
Comparator: G. hirsutume3

Verbatim

e1
“Here, we sequenced the G. australe genome”
✓ located verbatim in the source · abstract, characters 273–314

e2
“We found that 73.5% of the G. australe genome is composed of various repeat sequences”
✓ located verbatim in the source · abstract, characters 503–588

e3
“G. hirsutum (69.86%)”
✓ located verbatim in the source · abstract, characters 636–656

Title

Genome sequencing of the Australian wild diploid species Gossypium australe highlights disease resistance and delayed gland morphogenesis

Yingfan Cai; Xiaoyan Cai; Qinglian Wang; et al. Plant Biotechnology Journal 2019. doi:10.1111/pbi.13249

Other claims from this paper (12)

Method / resource The G. australe genome assembly reached a contig N50 of 1.83 Mb.
Method / resource The G. australe genome reached a scaffold N50 of 143.60 Mb.
Observation Repeat sequences make up 73.5% of the G. australe genome.
Observation G. australe repeat content differs from that of G. arboreum (85.39%).
Observation G. australe repeat content differs from that of G. barbadense (69.83%).
Observation The G. australe genome shows closer collinearity with G. arboreum than with G. raimondii.
Observation G. australe has undergone less extensive genome reorganization than G. arboreum.
Mechanism Selection and transcriptomic analyses implicate GauCCD7 and GauCBP1 in disease-resistance responses.
Intervention effect Verticillium dahliae induces expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Plant hormones strigolactone (GR24), salicylic acid and methyl jasmonate induce expression of GauCCD7 and GauCBP1 in G. australe.
Intervention effect Knockdown of the homologues of GauCCD7 and GauCBP1 significantly reduced resistance to Verticillium dahliae in a G. barbadense cultivar.
Intervention effect Knockdown of GauGRAS1 caused a glandless phenotype in partial tissues of G. australe.

Gossypium australe 55 claims

55 claims