Paper · 2007 · PLANT PHYSIOLOGY

RNAi Silencing of Genes for Elicitation or Biosynthesis of 5-Deoxyisoflavonoids Suppresses Race-Specific Resistance and Hypersensitive Cell Death in Phytophthora sojae Infected Tissues

Terrence L. Graham; Madge Y. Graham; Senthil Subramanian; et al.

9
claims
25
verbatim quotes
157
citations
3
research areas
✓
Open access · cc-by

Abstract

Isoflavonoids are thought to play an important role in soybean (Glycine max) resistance to Phytophthora sojae. This was addressed by silencing two genes for their biosynthesis and a third gene controlling their elicitation. Silencing of genes for isoflavone synthase (IFS) or chalcone reductase (CHR) was achieved in soybean roots through an Agrobacterium rhizogenes-mediated RNAi approach. Effectiveness of silencing was followed both by quantitative reverse transcriptase-polymerase chain reaction and high-performance liquid chromatography analyses. Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean. Loss of resistance was accompanied by suppression of hypersensitive (HR) cell death in both cultivars and suppression of cell death-associated activation of hydrogen peroxide and peroxidase. The various results suggest that the 5-deoxyisoflavonoids play a critical role in the establishment of cell death and race-specific resistance. The P. sojae cell wall glucan elicitor, a potent elicitor of 5-deoxyisoflavonoids, triggered a cell death response in roots that was also suppressed by silencing either CHR or IFS. Furthermore, silencing of the elicitor-releasing endoglucanase (PR-2) led to a loss of HR cell death and race-specific resistance to P. sojae and also to a loss of isoflavone and cell death responses to cell wall glucan elicitor. Taken together, these results suggest that in situ release of active fragments from a general resistance elicitor (pathogen-associated molecular pattern) is necessary for HR cell death in soybean roots carrying resistance genes at the Rps 1 locus, and that this cell death response is mediated through accumulations of the 5-deoxyisoflavones.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing IFS or CHR in soybean broke down Rps-mediated resistance to race 1 of P. sojae.

Taxon
soybeanGlycine maxe1
Material
'W79' (Rps 1c) or 'W82' (Rps 1k)e1
Treatment
Silencing either IFS or CHRe1
Interactor
P. sojaePhytophthora sojaee1pathogen
Outcome
breakdown of Rps-mediated resistance to race 1e1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e1

“Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean”

✓ located verbatim in the source · abstract, characters 553–692 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing IFS or CHR suppressed hypersensitive (HR) cell death in both soybean cultivars.

Taxon
soybeanGlycine maxe1
Material
'W79' (Rps 1c) or 'W82' (Rps 1k)e1
Treatment
Silencing either IFS or CHRe1
Interactor
P. sojaePhytophthora sojaee1pathogen
Outcome
suppression of hypersensitive (HR) cell deathe2

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e1

“Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean”

✓ located verbatim in the source · abstract, characters 553–692 · show in text ↑
e2

“Loss of resistance was accompanied by suppression of hypersensitive (HR) cell death in both cultivars and suppression of cell death-associated activation of hydrogen peroxide and peroxidase”

✓ located verbatim in the source · abstract, characters 694–883 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing IFS or CHR suppressed the cell death-associated activation of hydrogen peroxide and peroxidase.

Taxon
soybeanGlycine maxe1
Treatment
Silencing either IFS or CHRe1
Interactor
P. sojaePhytophthora sojaee1pathogen
Outcome
suppression of cell death-associated activation of hydrogen peroxide and peroxidasee2

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e1

“Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean”

✓ located verbatim in the source · abstract, characters 553–692 · show in text ↑
e2

“Loss of resistance was accompanied by suppression of hypersensitive (HR) cell death in both cultivars and suppression of cell death-associated activation of hydrogen peroxide and peroxidase”

✓ located verbatim in the source · abstract, characters 694–883 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The 5-deoxyisoflavonoids are suggested to play a critical role in establishing cell death and race-specific resistance.

Taxon
soybeanGlycine maxe1
Compound
5-deoxyisoflavonoidse3
Outcome
establishment of cell death and race-specific resistancee3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e1

“Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean”

✓ located verbatim in the source · abstract, characters 553–692 · show in text ↑
e3

“The various results suggest that the 5-deoxyisoflavonoids play a critical role in the establishment of cell death and race-specific resistance”

✓ located verbatim in the source · abstract, characters 885–1027 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing either CHR or IFS suppressed the cell death response in roots triggered by the P. sojae cell wall glucan elicitor.

Taxon
soybeanGlycine maxe1
Treatment
silencing either CHR or IFSe4
Interactor
P. sojaePhytophthora sojaee4pathogen
Outcome
cell death response in rootse4
Qualifier
P. sojae cell wall glucan elicitore4

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e1

“Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean”

✓ located verbatim in the source · abstract, characters 553–692 · show in text ↑
e4

“The P. sojae cell wall glucan elicitor, a potent elicitor of 5-deoxyisoflavonoids, triggered a cell death response in roots that was also suppressed by silencing either CHR or IFS”

✓ located verbatim in the source · abstract, characters 1029–1208 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing the elicitor-releasing endoglucanase (PR-2) led to loss of HR cell death and race-specific resistance to P. sojae.

Taxon
soybeanGlycine maxe1
Treatment
silencing of the elicitor-releasing endoglucanase (PR-2)e5
Interactor
P. sojaePhytophthora sojaee5pathogen
Gene
elicitor-releasing endoglucanase (PR-2)e5
Outcome
loss of HR cell death and race-specific resistancee5

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e1

“Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean”

✓ located verbatim in the source · abstract, characters 553–692 · show in text ↑
e5

“silencing of the elicitor-releasing endoglucanase (PR-2) led to a loss of HR cell death and race-specific resistance to P. sojae and also to a loss of isoflavone and cell death responses to cell wall glucan elicitor”

✓ located verbatim in the source · abstract, characters 1223–1438 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing the elicitor-releasing endoglucanase (PR-2) led to loss of isoflavone and cell death responses to cell wall glucan elicitor.

Taxon
soybeanGlycine maxe1
Treatment
silencing of the elicitor-releasing endoglucanase (PR-2)e5
Gene
elicitor-releasing endoglucanase (PR-2)e5
Outcome
loss of isoflavone and cell death responses to cell wall glucan elicitore5

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e1

“Silencing either IFS or CHR led to a breakdown of Rps-mediated resistance to race 1 of P. sojae in 'W79' (Rps 1c) or 'W82' (Rps 1k) soybean”

✓ located verbatim in the source · abstract, characters 553–692 · show in text ↑
e5

“silencing of the elicitor-releasing endoglucanase (PR-2) led to a loss of HR cell death and race-specific resistance to P. sojae and also to a loss of isoflavone and cell death responses to cell wall glucan elicitor”

✓ located verbatim in the source · abstract, characters 1223–1438 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

In situ release of active fragments from a general resistance elicitor is necessary for HR cell death in soybean roots carrying Rps 1 resistance genes.

Taxon
soybeanGlycine maxe6
Gene
Rps 1 locuse6
Outcome
HR cell deathe6
Qualifier
in situ release of active fragments from a general resistance elicitore6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e6

“in situ release of active fragments from a general resistance elicitor (pathogen-associated molecular pattern) is necessary for HR cell death in soybean roots carrying resistance genes at the Rps 1 locus”

✓ located verbatim in the source · abstract, characters 1483–1686 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

HR cell death is mediated through accumulation of 5-deoxyisoflavones in soybean roots.

Taxon
soybeanGlycine maxe6
Compound
5-deoxyisoflavonese7
Outcome
cell death responsee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“Phytophthora sojae Infected Tissues”

✓ located verbatim in the source · title, characters 149–184 · show in text ↑
e6

“in situ release of active fragments from a general resistance elicitor (pathogen-associated molecular pattern) is necessary for HR cell death in soybean roots carrying resistance genes at the Rps 1 locus”

✓ located verbatim in the source · abstract, characters 1483–1686 · show in text ↑
e7

“this cell death response is mediated through accumulations of the 5-deoxyisoflavones”

✓ located verbatim in the source · abstract, characters 1697–1781 · show in text ↑

isoflavone · Phytophthora sojae · Glycine max (soybean)Results agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. negative
  2. negative
See all 3 papers →

loss of function · cytology · Glycine max (soybean)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative
See all 4 papers →

loss of function · Phytophthora sojae · Glycine max (soybean)Positive and negative results

24 papers: 9 positive, 15 negative or no effect

14 papers in the same direction as this paper · 9 in the opposite direction

  1. positive
  2. positive
  3. negative

20 papers more in this group

See all 24 papers →

resistance inducer · Phytophthora sojae · Glycine max (soybean)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. no effect
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.