Paper · 2000 · Proceedings of the National Academy of Sciences

Light stress-regulated two-helix proteins in Arabidopsis thaliana related to the chlorophyll a/b -binding gene family

Mounia Heddad; Iwona Adamska

9
claims
18
verbatim quotes
165
citations
3
research areas
—
Not open access

Abstract

The chlorophyll a/b, chlorophyll a/c, and chlorophyll a/a light-harvesting proteins are part of an extended gene family that also includes the transiently expressed stress proteins, the Elips (early light-induced proteins). Four Elip homologue proteins, encoded by single-copy nuclear genes, have been identified in the Arabidopsis thaliana database. These proteins were divided into two groups according to the expression pattern under light-stress conditions and the predicted secondary structure. Group one included two members of the Elip family with three predicted transmembrane helices and a gene expression strictly related to light stress. Group two included two proteins, the Seps (stress-enhanced proteins), which possessed two predicted transmembrane segments. The transcripts of Sep1 and Sep2 were present under low light conditions, but their level increased 4- to 10-fold during illumination of plants with high-intensity light. Preliminary data indicated that the induced transcripts were translated in vivo. Other physiological stress conditions, such as cold, heat, desiccation, salt, wounding, or oxidative stress, did not significantly influence the expression of Sep genes. In vitro import of radioactively labeled precursors of Seps into isolated chloroplasts confirmed the thylakoid membrane localization of these proteins. Considering the predicted protein structure and homology to other pigment-antenna proteins, the two-helix Seps might represent an evolutionary missing link between the one- and three-helix antenna proteins present in pro- and eukaryota.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Four Elip homologue proteins encoded by single-copy nuclear genes were identified.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
Four Elip homologue proteinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Four Elip homologue proteins, encoded by single-copy nuclear genes, have been identified in the Arabidopsis thaliana database.”

✓ located verbatim in the source · abstract, characters 224–350 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The proteins divided into two groups by light-stress expression and predicted structure.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
two groupse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“These proteins were divided into two groups according to the expression pattern under light-stress conditions and the predicted secondary structure.”

✓ located verbatim in the source · abstract, characters 351–499 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The first group included two three-helix Elips with expression tied to light stress.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
Elipe0
Outcome
three predicted transmembrane helices and a gene expression strictly related to light stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Group one included two members of the Elip family with three predicted transmembrane helices and a gene expression strictly related to light stress.”

✓ located verbatim in the source · abstract, characters 500–648 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The second group contained two Sep proteins with two predicted transmembrane segments.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
Sepse0
Outcome
two predicted transmembrane segmentse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Group two included two proteins, the Seps (stress-enhanced proteins), which possessed two predicted transmembrane segments.”

✓ located verbatim in the source · abstract, characters 649–772 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Sep1 and Sep2 transcripts rose 4- to 10-fold under high-intensity light.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
high-intensity lighte0
Outcome
transcripts of Sep1 and Sep2e0
Direction
increasede0
Value
4- to 10-folde0
Comparator
low light conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The transcripts of Sep1 and Sep2 were present under low light conditions, but their level increased 4- to 10-fold during illumination of plants with high-intensity light.”

✓ located verbatim in the source · abstract, characters 773–943 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Induced Sep transcripts were translated in vivo according to preliminary data.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
induced transcripts were translated in vivoe0
Qualifier
Preliminary datae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Preliminary data indicated that the induced transcripts were translated in vivo.”

✓ located verbatim in the source · abstract, characters 944–1024 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Cold, heat, desiccation, salt, wounding and oxidative stress did not significantly change Sep expression.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
cold, heat, desiccation, salt, wounding, or oxidative stresse0
Outcome
expression of Sep genese0
Direction
did not significantly influencee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Other physiological stress conditions, such as cold, heat, desiccation, salt, wounding, or oxidative stress, did not significantly influence the expression of Sep genes.”

✓ located verbatim in the source · abstract, characters 1025–1194 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Sep proteins localized to the thylakoid membrane in chloroplast import assays.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
Sepse0
Outcome
thylakoid membrane localizatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In vitro import of radioactively labeled precursors of Seps into isolated chloroplasts confirmed the thylakoid membrane localization of these proteins.”

✓ located verbatim in the source · abstract, characters 1195–1346 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest two-helix Seps may be an evolutionary link between one- and three-helix antenna proteins.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
Sepse0
Outcome
evolutionary missing linke0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the two-helix Seps might represent an evolutionary missing link between the one- and three-helix antenna proteins present in pro- and eukaryota.”

✓ located verbatim in the source · abstract, characters 1439–1583 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 45–65 · show in text ↑

mechanical · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

15 papers: 11 positive, 4 negative or no effect

3 papers in the same direction as this paper · 11 in the opposite direction

  1. positive
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heat · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

18 papers: 6 positive, 12 negative or no effect

11 papers in the same direction as this paper · 6 in the opposite direction

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salinity · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

20 papers: 10 positive, 10 negative or no effect

9 papers in the same direction as this paper · 10 in the opposite direction

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drought · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

26 papers: 12 positive, 14 negative or no effect

13 papers in the same direction as this paper · 12 in the opposite direction

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cold · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

33 papers: 19 positive, 14 negative or no effect

13 papers in the same direction as this paper · 19 in the opposite direction

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light · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

47 papers: 32 positive, 15 negative or no effect

31 papers in the same direction as this paper · 15 in the opposite direction

  1. negative
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oxidative · molecular: expression · Arabidopsis thaliana (thale cress)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. no effect
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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.