Paper · 2002 · Proceedings of the National Academy of Sciences

C-terminal domain phosphatase-like family members (AtCPLs) differentially regulate Arabidopsis thaliana abiotic stress signaling, growth, and development

Hisashi Koiwa; Adam W. Barb; Liming Xiong; et al.

11
claims
22
verbatim quotes
172
citations
3
research areas
—
Not open access

Abstract

Cold, hyperosmolarity, and abscisic acid (ABA) signaling induce RD29A expression, which is an indicator of the plant stress adaptation response. Two nonallelic Arabidopsis thaliana (ecotype C24) T-DNA insertional mutations, cpl1 and cpl3, were identified based on hyperinduction of RD29A expression that was monitored by using the luciferase (LUC) reporter gene (RD29ALUC) imaging system. Genetic linkage analysis and complementation data established that the recessive cpl1 and cpl3 mutations are caused by T-DNA insertions in AtCPL1 (Arabidopsis C-terminal domain phosphatase-like) and AtCPL3, respectively. Gel assays using recombinant AtCPL1 and AtCPL3 detected innate phosphatase activity like other members of the phylogenetically conserved family that dephosphorylate the C-terminal domain of RNA polymerase II (RNAP II). cpl1 mutation causes RD29ALUC hyperexpression and transcript accumulation in response to cold, ABA, and NaCl treatments, whereas the cpl3 mutation mediates hyperresponsiveness only to ABA. Northern analysis confirmed that LUC transcript accumulation also occurs in response to these stimuli. cpl1 plants accumulate biomass more rapidly and exhibit delayed flowering relative to wild type whereas cpl3 plants grow more slowly and flower earlier than wild-type plants. Hence AtCPL1 and AtCPL3 are negative regulators of stress responsive gene transcription and modulators of growth and development. These results suggest that C-terminal domain phosphatase regulation of RNAP II phosphorylation status is a focal control point of complex processes like plant stress responses and development. AtCPL family members apparently have both unique and overlapping transcriptional regulatory functions that differentiate the signal output that determines the plant response.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

The cpl1 mutation was linked to a T-DNA insertion in AtCPL1.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl1e0
Gene
AtCPL1e0
Outcome
T-DNA insertions in AtCPL1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“recessive cpl1 and cpl3 mutations are caused by T-DNA insertions in AtCPL1 (Arabidopsis C-terminal domain phosphatase-like) and AtCPL3, respectively”

✓ located verbatim in the source · abstract, characters 460–608 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The cpl3 mutation was linked to a T-DNA insertion in AtCPL3.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl3e0
Gene
AtCPL3e0
Outcome
T-DNA insertions in AtCPL1 (Arabidopsis C-terminal domain phosphatase-like) and AtCPL3e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“recessive cpl1 and cpl3 mutations are caused by T-DNA insertions in AtCPL1 (Arabidopsis C-terminal domain phosphatase-like) and AtCPL3, respectively”

✓ located verbatim in the source · abstract, characters 460–608 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AtCPL1 had innate phosphatase activity.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
AtCPL1e0
Outcome
innate phosphatase activitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Gel assays using recombinant AtCPL1 and AtCPL3 detected innate phosphatase activity”

✓ located verbatim in the source · abstract, characters 610–693 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AtCPL3 had innate phosphatase activity.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
AtCPL3e0
Outcome
innate phosphatase activitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Gel assays using recombinant AtCPL1 and AtCPL3 detected innate phosphatase activity”

✓ located verbatim in the source · abstract, characters 610–693 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

cpl1 hyperexpressed RD29ALUC under cold, ABA, and NaCl treatments.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl1e0
Treatment
cold, ABA, and NaCl treatmentse0
Outcome
RD29ALUC hyperexpression and transcript accumulatione0
Direction
hyperexpressione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“cpl1 mutation causes RD29ALUC hyperexpression and transcript accumulation in response to cold, ABA, and NaCl treatments”

✓ located verbatim in the source · abstract, characters 829–948 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

cpl3 was hyperresponsive only to ABA.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl3e0
Treatment
ABAe0
Outcome
hyperresponsivenesse0
Direction
hyperresponsivenesse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the cpl3 mutation mediates hyperresponsiveness only to ABA”

✓ located verbatim in the source · abstract, characters 958–1016 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

LUC transcript accumulated in response to the stimuli.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
these stimulie0
Outcome
LUC transcript accumulatione0
Direction
accumulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“LUC transcript accumulation also occurs in response to these stimuli”

✓ located verbatim in the source · abstract, characters 1051–1119 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

cpl1 plants accumulated biomass more rapidly than wild type.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl1e0
Outcome
biomasse0
Direction
more rapidlye0
Comparator
wild typee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“cpl1 plants accumulate biomass more rapidly and exhibit delayed flowering relative to wild type”

✓ located verbatim in the source · abstract, characters 1121–1216 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

cpl1 plants flowered later than wild type.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl1e0
Outcome
floweringe0
Direction
delayede0
Comparator
wild typee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“cpl1 plants accumulate biomass more rapidly and exhibit delayed flowering relative to wild type”

✓ located verbatim in the source · abstract, characters 1121–1216 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

cpl3 plants grew more slowly than wild type.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl3e0
Outcome
growe0
Direction
more slowlye0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“cpl3 plants grow more slowly and flower earlier than wild-type plants”

✓ located verbatim in the source · abstract, characters 1225–1294 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

cpl3 plants flowered earlier than wild type.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Material
cpl3e0
Outcome
flowere0
Direction
earliere0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“cpl3 plants grow more slowly and flower earlier than wild-type plants”

✓ located verbatim in the source · abstract, characters 1225–1294 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 83–103 · show in text ↑

(+)-abscisic acid · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

50 papers: 31 positive, 19 negative or no effect

30 papers in the same direction as this paper · 19 in the opposite direction

  1. negative
  2. no effect
  3. negative

46 papers more in this group

See all 50 papers →

cold · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

33 papers: 19 positive, 14 negative or no effect

18 papers in the same direction as this paper · 14 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

29 papers more in this group

See all 33 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.