Paper · 1998 · Physiologia Plantarum

Substrates regulate the phosphorylation status of nitrate reductase

Marina B. Rouby; Claudio A. González; Juana D. Kenis

13
claims
27
verbatim quotes
5
citations
1
research areas
—
Not open access

Abstract

The effect of substrates on the phosphorylation status of nitrate reductase (NR; EC 1.6.6.1) was studied. The enzyme was obtained from the first leaf of 7‐day‐old oat ( Avena sativa L. cv. Suregrain) plants, grown in the light. When desalted crude extracts were incubated with ATP, NR was strongly phosphorylated, as evidenced by the inhibition of the enzyme's activity in the presence of Mg 2+ . NR sensitivity to Mg 2+ remained unchanged when 10 m M nitrate was added to crude extracts after ATP. Addition of nitrate before or simultaneously with ATP slightly decreased Mg 2+ inhibition of NR, which was strongly diminished in the presence of 10 m M NO 3 − + 100 µ M NADH. Incubation with NADH alone did not affect the enzyme's susceptibility to Mg 2+ inhibition. When ammonium sulfate was added to crude extracts, NR was recovered in a 0‐40% saturation fraction (F1). After incubation of F1 with ATP, the sensitivity of the enzyme to Mg 2+ inhibition remained low, but it strongly increased after mixing F1 with a 45‐60% saturation fraction (F2) suggesting that also in oats an additional factor (inactivating protein, IP), which probably binds to phospho‐NR, would be required to keep the phosphorylated enzyme inactive in a +Mg 2+ medium. Addition of 10 m M NO 3 − + 100 µ M NADH together with desalted F2 did not prevent Mg 2+ inhibition suggesting that NO 3 − did not interfere with IP binding to phospho‐NR. Again, incubation of F1 with both substrates during in vitro phosphorylation kept the enzyme active after adding F2, even in the presence of Mg 2+ , After in vitro phosphorylation, NR in crude extract was hardly reactivated when incubated alone or in the presence of 10 m M NO 3 − at 30°C. On the other hand, a strong and very rapid reactivation was found when the extract was incubated with both nitrate and NADH. Microcystine, an inhibitor of types 1 and 2A phosphoprotein phosphatases, inhibited the reactivation of phospho‐NR induced by the substrates. The results presented here show that the substrates could prevent NR phosphorylation and induce the enzyme's dephosphorylation, but they were effective only after their binding to the NR protein. Thereby, they seemed to affect the NR protein itself and not the phosphatase‐ or the kinase‐proteins. It has been reported that nitrate binding to the enzyme's active site induces conformational changes in the NR protein. We propose that this conformational change would prevent NR phosphorylation, by converting the enzyme into a form in which the site recognized by the protein kinase is no longer accessible, and, simultaneously, stimulate NR dephophorylation by allowing the specific phosphatases to recognize NR.

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Claims 13

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

ATP strongly phosphorylated nitrate reductase in oat leaf crude extracts, indicated by Mg2+ inhibition of activity.

Treatment
ATPe0
Gene
NRe0
Outcome
NRe0
Direction
strongly phosphorylatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“When desalted crude extracts were incubated with ATP, NR was strongly phosphorylated, as evidenced by the inhibition of the enzyme's activity in the presence of Mg 2+ .”

✓ located verbatim in the source · abstract, characters 228–396 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Nitrate added after ATP did not change NR sensitivity to Mg2+.

Treatment
10 m M nitratee0
Outcome
NR sensitivity to Mg 2+e0
Direction
remained unchangede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“NR sensitivity to Mg 2+ remained unchanged when 10 m M nitrate was added to crude extracts after ATP.”

✓ located verbatim in the source · abstract, characters 397–498 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrate before or with ATP slightly decreased Mg2+ inhibition of NR.

Treatment
nitrate before or simultaneously with ATPe0
Outcome
Mg 2+ inhibition of NRe0
Direction
slightly decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Addition of nitrate before or simultaneously with ATP slightly decreased Mg 2+ inhibition of NR”

✓ located verbatim in the source · abstract, characters 499–594 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrate and NADH together strongly diminished Mg2+ inhibition of NR.

Treatment
10 m M NO 3 − + 100 µ M NADHe0
Outcome
Mg 2+ inhibition of NRe1
Direction
strongly diminishede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“which was strongly diminished in the presence of 10 m M NO 3 − + 100 µ M NADH.”

✓ located verbatim in the source · abstract, characters 596–674 · show in text ↑
e1

“Mg 2+ inhibition of NR”

✓ located verbatim in the source · abstract, characters 572–594 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

NADH alone did not affect Mg2+ inhibition susceptibility.

Treatment
NADH alonee0
Outcome
susceptibility to Mg 2+ inhibitione0
Direction
did not affecte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Incubation with NADH alone did not affect the enzyme's susceptibility to Mg 2+ inhibition.”

✓ located verbatim in the source · abstract, characters 675–765 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Adding the F2 fraction to ATP treated F1 strongly increased NR sensitivity to Mg2+ inhibition.

Treatment
mixing F1 with a 45‐60% saturation fraction (F2)e0
Outcome
sensitivity of the enzyme to Mg 2+ inhibitione0
Direction
strongly increasede0
Comparator
F1 with ATPe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“After incubation of F1 with ATP, the sensitivity of the enzyme to Mg 2+ inhibition remained low, but it strongly increased after mixing F1 with a 45‐60% saturation fraction (F2)”

✓ located verbatim in the source · abstract, characters 871–1048 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Nitrate and NADH added with F2 did not prevent Mg2+ inhibition.

Treatment
10 m M NO 3 − + 100 µ M NADH together with desalted F2e0
Outcome
Mg 2+ inhibitione0
Direction
did not prevente0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Addition of 10 m M NO 3 − + 100 µ M NADH together with desalted F2 did not prevent Mg 2+ inhibition”

✓ located verbatim in the source · abstract, characters 1244–1343 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Both substrates during F1 phosphorylation kept NR active after F2 was added despite Mg2+.

Treatment
both substrates during in vitro phosphorylatione0
Outcome
enzyme activee0
Direction
kept the enzyme activee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“incubation of F1 with both substrates during in vitro phosphorylation kept the enzyme active after adding F2, even in the presence of Mg 2+”

✓ located verbatim in the source · abstract, characters 1423–1562 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

After phosphorylation NR was hardly reactivated alone or with nitrate at 30°C.

Outcome
NR in crude extracte0
Direction
hardly reactivatede0
Qualifier
at 30°Ce0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“After in vitro phosphorylation, NR in crude extract was hardly reactivated when incubated alone or in the presence of 10 m M NO 3 − at 30°C.”

✓ located verbatim in the source · abstract, characters 1565–1705 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrate and NADH together caused strong, rapid NR reactivation.

Treatment
both nitrate and NADHe0
Outcome
reactivatione0
Direction
strong and very rapide0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a strong and very rapid reactivation was found when the extract was incubated with both nitrate and NADH”

✓ located verbatim in the source · abstract, characters 1725–1829 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Microcystine inhibited substrate induced reactivation of phospho NR.

Treatment
Microcystinee0
Outcome
reactivation of phospho‐NRe0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Microcystine, an inhibitor of types 1 and 2A phosphoprotein phosphatases, inhibited the reactivation of phospho‐NR induced by the substrates.”

✓ located verbatim in the source · abstract, characters 1831–1972 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Substrate binding appears to prevent phosphorylation and promote dephosphorylation by changing the NR protein.

Gene
NR proteine0
Outcome
NR phosphorylatione0
Direction
prevente0
Qualifier
only after their binding to the NR proteine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The results presented here show that the substrates could prevent NR phosphorylation and induce the enzyme's dephosphorylation, but they were effective only after their binding to the NR protein. Thereby, they seemed to affect the NR protein itself and not the phosphatase‐ or the kinase‐proteins.”

✓ located verbatim in the source · abstract, characters 1973–2270 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

The authors propose that nitrate induced conformational change blocks kinase access and stimulates NR dephosphorylation.

Gene
NRe0
Outcome
NR phosphorylatione0
Direction
prevente0
Qualifier
this conformational changee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“We propose that this conformational change would prevent NR phosphorylation, by converting the enzyme into a form in which the site recognized by the protein kinase is no longer accessible, and, simultaneously, stimulate NR dephophorylation by allowing the specific phosphatases to recognize NR.”

✓ located verbatim in the source · abstract, characters 2391–2686 · show in text ↑
e7

“7‐day‐old oat”

✓ located verbatim in the source · abstract, characters 153–166 · show in text ↑

nitrogen · disease · Avena sativa (oats)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive
See all 4 papers →

nitrogen · nutrient: content · Avena sativa (oats)Positive and negative results

30 papers: 24 positive, 6 negative or no effect

5 papers in the same direction as this paper · 24 in the opposite direction

  1. positive
  2. positive
  3. positive

26 papers more in this group

See all 30 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.