Paper · 2007 · PLANT PHYSIOLOGY

GIGANTEA Regulates Phytochrome A-Mediated Photomorphogenesis Independently of Its Role in the Circadian Clock

Karina Andrea Oliverio; María Crepy; Ellen L. Martin-Tryon; et al.

6
claims
11
verbatim quotes
92
citations
3
research areas
✓
Open access · cc-by

Abstract

GIGANTEA (GI) is a nuclear protein involved in the promotion of flowering by long days, in light input to the circadian clock, and in seedling photomorphogenesis under continuous red light but not far-red light (FR). Here, we report that in Arabidopsis (Arabidopsis thaliana) different alleles of gi have defects in the hypocotyl-growth and cotyledon-unfolding responses to hourly pulses of FR, a treatment perceived by phytochrome A (phyA). This phenotype is rescued by overexpression of GI. The very-low-fluence response of seed germination was also reduced in gi. Since the circadian clock modulates many light responses, we investigated whether these gi phenotypes were due to alterations in the circadian system or light signaling per se. In experiments where FR pulses were given to dark-incubated seeds or seedlings at different times of the day, gi showed reduced seed germination, cotyledon unfolding, and activity of a luciferase reporter fused to the promoter of a chlorophyll a/b-binding protein gene; however, rhythmic sensitivity was normal in these plants. We conclude that while GI does not affect the high-irradiance responses of phyA, it does affect phyA-mediated very-low-fluence responses via mechanisms that do not obviously involve its circadian functions.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

gi alleles had defective hypocotyl growth and cotyledon unfolding responses to hourly far-red pulses.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
hourly pulses of FRe0
Gene
gie0
Outcome
hypocotyl-growth and cotyledon-unfolding responsese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“in Arabidopsis (Arabidopsis thaliana) different alleles of gi have defects in the hypocotyl-growth and cotyledon-unfolding responses to hourly pulses of FR”

✓ located verbatim in the source · abstract, characters 238–393 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GI overexpression rescued the gi light-response phenotype.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
overexpression of GIe0
Gene
GIe0
Outcome
phenotypee0
Comparator
gie1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This phenotype is rescued by overexpression of GI”

✓ located verbatim in the source · abstract, characters 442–491 · show in text ↑
e1

“in Arabidopsis (Arabidopsis thaliana) different alleles of gi have defects in the hypocotyl-growth and cotyledon-unfolding responses to hourly pulses of FR”

✓ located verbatim in the source · abstract, characters 238–393 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Very-low-fluence germination response was reduced in gi.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Gene
gie0
Outcome
very-low-fluence response of seed germinatione0
Direction
reducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The very-low-fluence response of seed germination was also reduced in gi”

✓ located verbatim in the source · abstract, characters 493–565 · show in text ↑
e1

“in Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 238–275 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Far-red pulses reduced gi seed germination and cotyledon unfolding and reporter activity.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
FR pulsese0
Gene
gie0
Outcome
seed germination, cotyledon unfolding, and activity of a luciferase reportere0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“FR pulses were given to dark-incubated seeds or seedlings at different times of the day, gi showed reduced seed germination, cotyledon unfolding, and activity of a luciferase reporter fused to the promoter of a chlorophyll a/b-binding protein gene”

✓ located verbatim in the source · abstract, characters 765–1012 · show in text ↑
e1

“in Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 238–275 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Rhythmic light sensitivity remained normal in gi plants.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Outcome
rhythmic sensitivity was normale0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“rhythmic sensitivity was normal in these plants”

✓ located verbatim in the source · abstract, characters 1023–1070 · show in text ↑
e1

“in Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 238–275 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Authors conclude GI affects phyA-mediated very-low-fluence responses without an obvious circadian mechanism.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Gene
GIe0
Outcome
phyA-mediated very-low-fluence responsese0
Qualifier
mechanisms that do not obviously involve its circadian functionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“GI does not affect the high-irradiance responses of phyA, it does affect phyA-mediated very-low-fluence responses via mechanisms that do not obviously involve its circadian functions”

✓ located verbatim in the source · abstract, characters 1095–1277 · show in text ↑
e1

“in Arabidopsis (Arabidopsis thaliana)”

✓ located verbatim in the source · abstract, characters 238–275 · show in text ↑

light · growth · Arabidopsis thaliana (thale cress)Results differ

44 papers: 30 positive, 14 negative or no effect

13 papers in the same direction as this paper · 30 in the opposite direction

  1. positive
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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.