Paper · 2013 · New Phytologist

The tillering phenotype of the rice plastid terminal oxidase (PTOX) loss‐of‐function mutant is associated with strigolactone deficiency

Muluneh Tamiru; Akira Abe; Hiroe Utsushi; et al.

9
claims
17
verbatim quotes
35
citations
3
research areas
—
Not open access

Abstract

The significance of plastid terminal oxidase (PTOX) in phytoene desaturation and chloroplast function has been demonstrated using PTOX-deficient mutants, particularly in Arabidopsis. However, studies on its role in monocots are lacking. Here, we report cloning and characterization of the rice (Oryza sativa) PTOX1 gene. Using Ecotype Targeting Induced Local Lesions IN Genomes (EcoTILLING) and TILLING as forward genetic tools, we identified the causative mutation of an EMS mutant characterized by excessive tillering, semi-dwarfism and leaf variegation that corresponded to the PTOX1 gene. The tillering and semi-dwarf phenotypes of the ptox1 mutant are similar to phenotypes of known strigolactone (SL)-related rice mutants, and both phenotypic traits could be rescued by application of the synthetic SL GR24. The ptox1 mutant accumulated phytoene in white leaf sectors with a corresponding deficiency in β-carotene, consistent with the expected function of PTOX1 in promoting phytoene desaturase activity. There was also no accumulation of the carotenoid-derived SL ent-2'-epi-5-deoxystrigol in root exudates. Elevated concentrations of auxin were detected in the mutant, supporting previous observations that SL interaction with auxin is important in shoot branching control. Our results demonstrate that PTOX1 is required for both carotenoid and SL synthesis resulting in SL-deficient phenotypes in rice.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

The causative mutation of a rice mutant with excessive tillering, semi-dwarfism and leaf variegation corresponded to PTOX1.

Taxon
Oryza sativaOryza sativae1
Material
EMS mutante0
Gene
PTOX1e0
Outcome
causative mutatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“we identified the causative mutation of an EMS mutant characterized by excessive tillering, semi-dwarfism and leaf variegation that corresponded to the PTOX1 gene”

✓ located verbatim in the source · abstract, characters 429–591 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The ptox1 mutant had tillering and semi-dwarf phenotypes similar to strigolactone-related rice mutants.

Taxon
Oryza sativaOryza sativae1
Material
ptox1 mutante0
Outcome
tillering and semi-dwarf phenotypese0
Comparator
known strigolactone (SL)-related rice mutantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The tillering and semi-dwarf phenotypes of the ptox1 mutant are similar to phenotypes of known strigolactone (SL)-related rice mutants”

✓ located verbatim in the source · abstract, characters 593–727 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Synthetic strigolactone GR24 rescued the ptox1 tillering phenotype.

Taxon
Oryza sativaOryza sativae1
Material
ptox1 mutante0
Treatment
application of the synthetic SL GR24e0
Outcome
tilleringe0
Direction
rescuede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The tillering and semi-dwarf phenotypes of the ptox1 mutant are similar to phenotypes of known strigolactone (SL)-related rice mutants, and both phenotypic traits could be rescued by application of the synthetic SL GR24”

✓ located verbatim in the source · abstract, characters 593–812 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Synthetic strigolactone GR24 rescued the ptox1 semi-dwarf phenotype.

Taxon
Oryza sativaOryza sativae1
Material
ptox1 mutante0
Treatment
application of the synthetic SL GR24e0
Outcome
semi-dwarf phenotypese0
Direction
rescuede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The tillering and semi-dwarf phenotypes of the ptox1 mutant are similar to phenotypes of known strigolactone (SL)-related rice mutants, and both phenotypic traits could be rescued by application of the synthetic SL GR24”

✓ located verbatim in the source · abstract, characters 593–812 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The ptox1 mutant accumulated phytoene in white leaf sectors.

Taxon
Oryza sativaOryza sativae1
Material
ptox1 mutante0
Organ / stage
white leaf sectorse0
Outcome
phytoenee0
Direction
accumulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The ptox1 mutant accumulated phytoene in white leaf sectors”

✓ located verbatim in the source · abstract, characters 814–873 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The ptox1 mutant was deficient in β-carotene in white leaf sectors.

Taxon
Oryza sativaOryza sativae1
Material
ptox1 mutante0
Organ / stage
white leaf sectorse0
Outcome
β-carotenee0
Direction
deficiencye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The ptox1 mutant accumulated phytoene in white leaf sectors with a corresponding deficiency in β-carotene”

✓ located verbatim in the source · abstract, characters 814–919 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The strigolactone ent-2'-epi-5-deoxystrigol did not accumulate in ptox1 root exudates.

Taxon
Oryza sativaOryza sativae1
Organ / stage
root exudatese0
Outcome
ent-2'-epi-5-deoxystrigole0
Direction
no accumulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“There was also no accumulation of the carotenoid-derived SL ent-2'-epi-5-deoxystrigol in root exudates”

✓ located verbatim in the source · abstract, characters 1011–1113 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Auxin concentrations were elevated in the ptox1 mutant.

Taxon
Oryza sativaOryza sativae1
Material
mutante0
Outcome
concentrations of auxine0
Direction
Elevatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Elevated concentrations of auxin were detected in the mutant”

✓ located verbatim in the source · abstract, characters 1115–1175 · show in text ↑
e1

“rice (Oryza sativa) PTOX1 gene”

✓ located verbatim in the source · abstract, characters 289–319 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

PTOX1 is required for carotenoid and strigolactone synthesis in rice.

Gene
PTOX1e0
Outcome
carotenoid and SL synthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“PTOX1 is required for both carotenoid and SL synthesis resulting in SL-deficient phenotypes in rice”

✓ located verbatim in the source · abstract, characters 1311–1410 · show in text ↑

class · growth · Oryza sativa (rice)Positive and negative results

80 papers: 62 positive, 18 negative or no effect

61 papers in the same direction as this paper · 17 in the opposite direction · 1 reporting no difference from an alternative

  1. no effect
  2. no effect
  3. negative

76 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.