Paper · 2023 · Life

Comparative Proteomics Analysis between Maize and Sorghum Uncovers Important Proteins and Metabolic Pathways Mediating Drought Tolerance

Ali Elnaeim Elbasheir Ali; Lizex Hollenbach Husselmann; David L. Tabb; et al.

8
claims
16
verbatim quotes
37
citations
3
research areas
✓
Open access · cc-by

Abstract

Drought severely affects crop yield and yield stability. Maize and sorghum are major crops in Africa and globally, and both are negatively impacted by drought. However, sorghum has a better ability to withstand drought than maize. Consequently, this study identifies differences between maize and sorghum grown in water deficit conditions, and identifies proteins associated with drought tolerance in these plant species. Leaf relative water content and proline content were measured, and label-free proteomics analysis was carried out to identify differences in protein expression in the two species in response to water deficit. Water deficit enhanced the proline accumulation in sorghum roots to a higher degree than in maize, and this higher accumulation was associated with enhanced water retention in sorghum. Proteomic analyses identified proteins with differing expression patterns between the two species, revealing key metabolic pathways that explain the better drought tolerance of sorghum than maize. These proteins include phenylalanine/tyrosine ammonia-lyases, indole-3-acetaldehyde oxidase, sucrose synthase and phenol/catechol oxidase. This study highlights the importance of phenylpropanoids, sucrose, melanin-related metabolites and indole acetic acid (auxin) as determinants of the differences in drought stress tolerance between maize and sorghum. The selection of maize and sorghum genotypes with enhanced expression of the genes encoding these differentially expressed proteins, or genetically engineering maize and sorghum to increase the expression of such genes, can be used as strategies for the production of maize and sorghum varieties with improved drought tolerance.

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Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Water deficit increased proline accumulation in sorghum roots to a higher degree than in maize.

Taxon
sorghumSorghume1
Organ / stage
rootse1
Treatment
Water deficite1
Outcome
proline accumulatione1
Direction
enhancede1
Comparator
maizee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Maize and sorghum are major crops in Africa and globally”

✓ located verbatim in the source · abstract, characters 57–113 · show in text ↑
e1

“Water deficit enhanced the proline accumulation in sorghum roots to a higher degree than in maize”

✓ located verbatim in the source · abstract, characters 631–728 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Higher proline accumulation in sorghum was associated with enhanced water retention.

Taxon
sorghumSorghume2
Compound
prolinee1
Outcome
water retentione2
Direction
enhancede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

e1

“Water deficit enhanced the proline accumulation in sorghum roots to a higher degree than in maize”

✓ located verbatim in the source · abstract, characters 631–728 · show in text ↑
e2

“this higher accumulation was associated with enhanced water retention in sorghum”

✓ located verbatim in the source · abstract, characters 734–814 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Proteomic analysis identified proteins with differing expression patterns between maize and sorghum under water deficit.

Taxon
Maize and sorghumSorghumZea mayse0
Outcome
proteins with differing expression patternse3
Qualifier
between the two speciese3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗
Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Maize and sorghum are major crops in Africa and globally”

✓ located verbatim in the source · abstract, characters 57–113 · show in text ↑
e3

“Proteomic analyses identified proteins with differing expression patterns between the two species, revealing key metabolic pathways that explain the better drought tolerance of sorghum than maize”

✓ located verbatim in the source · abstract, characters 816–1011 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Key metabolic pathways may explain the better drought tolerance of sorghum than maize.

Taxon
sorghumSorghume3
Outcome
drought tolerancee3
Qualifier
key metabolic pathwayse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Maize and sorghum are major crops in Africa and globally”

✓ located verbatim in the source · abstract, characters 57–113 · show in text ↑
e3

“Proteomic analyses identified proteins with differing expression patterns between the two species, revealing key metabolic pathways that explain the better drought tolerance of sorghum than maize”

✓ located verbatim in the source · abstract, characters 816–1011 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phenylalanine/tyrosine ammonia-lyases, indole-3-acetaldehyde oxidase and sucrose synthase are among the differentially expressed proteins between maize and sorghum.

Taxon
Maize and sorghumSorghumZea mayse0
Gene
phenylalanine/tyrosine ammonia-lyases, indole-3-acetaldehyde oxidase, sucrose synthasee4
Outcome
proteinse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗
Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Maize and sorghum are major crops in Africa and globally”

✓ located verbatim in the source · abstract, characters 57–113 · show in text ↑
e3

“Proteomic analyses identified proteins with differing expression patterns between the two species, revealing key metabolic pathways that explain the better drought tolerance of sorghum than maize”

✓ located verbatim in the source · abstract, characters 816–1011 · show in text ↑
e4

“These proteins include phenylalanine/tyrosine ammonia-lyases, indole-3-acetaldehyde oxidase, sucrose synthase and phenol/catechol oxidase”

✓ located verbatim in the source · abstract, characters 1013–1150 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phenol/catechol oxidase is among the differentially expressed proteins between maize and sorghum.

Taxon
Maize and sorghumSorghumZea mayse0
Gene
phenol/catechol oxidasee4
Outcome
proteinse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗
Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Maize and sorghum are major crops in Africa and globally”

✓ located verbatim in the source · abstract, characters 57–113 · show in text ↑
e3

“Proteomic analyses identified proteins with differing expression patterns between the two species, revealing key metabolic pathways that explain the better drought tolerance of sorghum than maize”

✓ located verbatim in the source · abstract, characters 816–1011 · show in text ↑
e4

“These proteins include phenylalanine/tyrosine ammonia-lyases, indole-3-acetaldehyde oxidase, sucrose synthase and phenol/catechol oxidase”

✓ located verbatim in the source · abstract, characters 1013–1150 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Phenylpropanoids, sucrose, melanin-related metabolites and indole acetic acid are determinants of the drought-tolerance differences between maize and sorghum.

Taxon
maize and sorghumSorghumZea mayse5
Outcome
differences in drought stress tolerancee5
Qualifier
phenylpropanoids, sucrose, melanin-related metabolites and indole acetic acid (auxin)e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗
Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e5

“This study highlights the importance of phenylpropanoids, sucrose, melanin-related metabolites and indole acetic acid (auxin) as determinants of the differences in drought stress tolerance between maize and sorghum”

✓ located verbatim in the source · abstract, characters 1152–1366 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Selecting maize and sorghum genotypes with enhanced expression of the differentially expressed protein genes, or engineering them to increase that expression, can produce varieties with improved drought tolerance.

Taxon
maize and sorghumSorghumZea mayse6
Outcome
production of maize and sorghum varieties with improved drought tolerancee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sorghum
Sorghum · Taxon · picture of the genus (one of its species)Evelyn Simak · CC BY-SA 2.0 · Wikimedia Commons ↗
Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e6

“The selection of maize and sorghum genotypes with enhanced expression of the genes encoding these differentially expressed proteins, or genetically engineering maize and sorghum to increase the expression of such genes, can be used as strategies for the production of maize and sorghum varieties with improved drought tolerance”

✓ located verbatim in the source · abstract, characters 1368–1695 · show in text ↑

drought · physiology: osmolytes · SorghumResults agree

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