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“root functionality”

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Aquaporin functionality in relation to H⁺‐ATPase activity in root cells of Capsicum annuum grown under salinity 3

Show all 3 →

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

NaCl reduced root cell hydraulic conductivity and ATPase activity.

Taxon: peppere1
Treatment: NaCle0
Gene: H+-ATPasee0
Outcome: cell hydraulic conductivity, Lpc, and H+-ATPase activitye0
Direction: large reductionse0

Not reportedComparator

Verbatim

e0
“Similar results were obtained for cell hydraulic conductivity, Lpc, and H+-ATPase activity, large reductions in the presence at NaCl or KCl”
✓ located verbatim in the source · abstract, characters 617–756

e1
“pepper (Capsicum annuum L.) plants”
✓ located verbatim in the source · abstract, characters 213–247

Title

Aquaporin functionality in relation to H⁺‐ATPase activity in root cells of Capsicum annuum grown under salinity

M. Carmen Martínez‐Ballesta; Vicente Martínez; Micaela Carvajal Physiologia Plantarum 2003. doi:10.1034/j.1399-3054.2003.00044.x

Other claims from this paper (6)

Intervention effect KCl reduced root cell hydraulic conductivity and ATPase activity.
Intervention effect Calcium ameliorated salt effects on hydraulic conductivity and ATPase activity.
Intervention effect Fusicoccin did not alter protoplast osmotic water permeability.
Intervention effect Mercury inhibited both ATPase and aquaporins.
Observation ATPase also contains mercury binding sites.
Association The authors infer ATPase and aquaporin activities may not be related in pepper.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

KCl reduced root cell hydraulic conductivity and ATPase activity.

Taxon: peppere1
Treatment: KCle0
Gene: H+-ATPasee0
Outcome: cell hydraulic conductivity, Lpc, and H+-ATPase activitye0
Direction: large reductionse0

Not reportedComparator

Verbatim

e0
“Similar results were obtained for cell hydraulic conductivity, Lpc, and H+-ATPase activity, large reductions in the presence at NaCl or KCl”
✓ located verbatim in the source · abstract, characters 617–756

e1
“pepper (Capsicum annuum L.) plants”
✓ located verbatim in the source · abstract, characters 213–247

Title

Aquaporin functionality in relation to H⁺‐ATPase activity in root cells of Capsicum annuum grown under salinity

M. Carmen Martínez‐Ballesta; Vicente Martínez; Micaela Carvajal Physiologia Plantarum 2003. doi:10.1034/j.1399-3054.2003.00044.x

Other claims from this paper (6)

Intervention effect NaCl reduced root cell hydraulic conductivity and ATPase activity.
Intervention effect Calcium ameliorated salt effects on hydraulic conductivity and ATPase activity.
Intervention effect Fusicoccin did not alter protoplast osmotic water permeability.
Intervention effect Mercury inhibited both ATPase and aquaporins.
Observation ATPase also contains mercury binding sites.
Association The authors infer ATPase and aquaporin activities may not be related in pepper.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Mercury inhibited both ATPase and aquaporins.

Taxon: peppere1
Treatment: Hg2+e0
Outcome: ATPase and aquaporinse0
Direction: inhibitede0

Not reportedComparator

Verbatim

e0
“Addition of Hg2+ inhibited both ATPase and aquaporins”
✓ located verbatim in the source · abstract, characters 918–971

e1
“pepper (Capsicum annuum L.) plants”
✓ located verbatim in the source · abstract, characters 213–247

Title

Aquaporin functionality in relation to H⁺‐ATPase activity in root cells of Capsicum annuum grown under salinity

M. Carmen Martínez‐Ballesta; Vicente Martínez; Micaela Carvajal Physiologia Plantarum 2003. doi:10.1034/j.1399-3054.2003.00044.x

Other claims from this paper (6)

Intervention effect NaCl reduced root cell hydraulic conductivity and ATPase activity.
Intervention effect KCl reduced root cell hydraulic conductivity and ATPase activity.
Intervention effect Calcium ameliorated salt effects on hydraulic conductivity and ATPase activity.
Intervention effect Fusicoccin did not alter protoplast osmotic water permeability.
Observation ATPase also contains mercury binding sites.
Association The authors infer ATPase and aquaporin activities may not be related in pepper.

Expression of Arabidopsis class 1 phytoglobin (AtPgb1) delays death and degradation of the root apical meristem during severe PEG-induced water deficit 3

Show all 3 →

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

AtPgb1 suppression compromised quiescent cell function.

Taxon: ArabidopsisArabidopsist0
Treatment: suppression of AtPgb1e0
Gene: AtPgb1e0
Outcome: functionality of the WOX5-expressing quiescent cells (QCs)e0
Direction: compromisede0

Not reportedComparator

Verbatim

e0
“suppression of AtPgb1 compromised the functionality of the WOX5-expressing quiescent cells (QCs)”
✓ located verbatim in the source · abstract, characters 1214–1310

t0
“Arabidopsis”
✓ located verbatim in the source · title, characters 14–25

Title

Expression of Arabidopsis class 1 phytoglobin (AtPgb1) delays death and degradation of the root apical meristem during severe PEG-induced water deficit

Mohamed M Mira; Shuanglong Huang; Karuna Kapoor; et al. Journal of Experimental Botany 2017. doi:10.1093/jxb/erx371

Other claims from this paper (12)

Intervention effect AtPgb1 overexpression alleviated PEG-induced growth retardation.
Intervention effect AtPgb1 overexpression reduced programmed cell death under PEG stress.
Observation AtPgb1 down-regulated roots had extensive programmed cell death under PEG stress.
Observation AtPgb1 down-regulated roots had reduced expression of ER-stress attenuators including BI-1.
Mechanism ROS and ethylene mediated cell death in stressed roots with AtPgb1 suppression.
Intervention effect Suppressing ROS synthesis or ethylene perception reduced cell death.
Intervention effect Suppressing ROS synthesis or ethylene perception partly restored root growth.
Observation PEG-induced root growth cessation followed loss of cell and tissue specification in the meristem.
Observation AtPgb1 overexpression attenuated, and suppression aggravated, root meristem changes.
Intervention effect AtPgb1 suppression led to premature columella stem cell differentiation.
Intervention effect AtPgb1 suppression rapidly reduced meristem size.
Observation SCR and WER expression and localization were most affected in PEG-treated roots with suppressed AtPgb1.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

AtPgb1 suppression rapidly reduced meristem size.

Taxon: ArabidopsisArabidopsist0
Treatment: suppression of AtPgb1e1
Outcome: meristem sizee0
Direction: reductione0

Not reportedComparator

Verbatim

e0
“a rapid reduction in meristem size”
✓ located verbatim in the source · abstract, characters 1407–1441

e1
“suppression of AtPgb1 compromised the functionality”
✓ located verbatim in the source · abstract, characters 1214–1265

t0
“Arabidopsis”
✓ located verbatim in the source · title, characters 14–25

Title

Expression of Arabidopsis class 1 phytoglobin (AtPgb1) delays death and degradation of the root apical meristem during severe PEG-induced water deficit

Mohamed M Mira; Shuanglong Huang; Karuna Kapoor; et al. Journal of Experimental Botany 2017. doi:10.1093/jxb/erx371

Other claims from this paper (12)

Intervention effect AtPgb1 overexpression alleviated PEG-induced growth retardation.
Intervention effect AtPgb1 overexpression reduced programmed cell death under PEG stress.
Observation AtPgb1 down-regulated roots had extensive programmed cell death under PEG stress.
Observation AtPgb1 down-regulated roots had reduced expression of ER-stress attenuators including BI-1.
Mechanism ROS and ethylene mediated cell death in stressed roots with AtPgb1 suppression.
Intervention effect Suppressing ROS synthesis or ethylene perception reduced cell death.
Intervention effect Suppressing ROS synthesis or ethylene perception partly restored root growth.
Observation PEG-induced root growth cessation followed loss of cell and tissue specification in the meristem.
Observation AtPgb1 overexpression attenuated, and suppression aggravated, root meristem changes.
Intervention effect AtPgb1 suppression compromised quiescent cell function.
Intervention effect AtPgb1 suppression led to premature columella stem cell differentiation.
Observation SCR and WER expression and localization were most affected in PEG-treated roots with suppressed AtPgb1.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

AtPgb1 suppression led to premature columella stem cell differentiation.

Taxon: ArabidopsisArabidopsist0
Treatment: suppression of AtPgb1e0
Outcome: differentiation of the adjacent columella stem cellse0
Direction: early and prematuree0

Not reportedComparator

Verbatim

e0
“suppression of AtPgb1 compromised the functionality of the WOX5-expressing quiescent cells (QCs), leading to the early and premature differentiation of the adjacent columella stem cells”
✓ located verbatim in the source · abstract, characters 1214–1399

t0
“Arabidopsis”
✓ located verbatim in the source · title, characters 14–25

Title

Expression of Arabidopsis class 1 phytoglobin (AtPgb1) delays death and degradation of the root apical meristem during severe PEG-induced water deficit

Mohamed M Mira; Shuanglong Huang; Karuna Kapoor; et al. Journal of Experimental Botany 2017. doi:10.1093/jxb/erx371

Other claims from this paper (12)

Intervention effect AtPgb1 overexpression alleviated PEG-induced growth retardation.
Intervention effect AtPgb1 overexpression reduced programmed cell death under PEG stress.
Observation AtPgb1 down-regulated roots had extensive programmed cell death under PEG stress.
Observation AtPgb1 down-regulated roots had reduced expression of ER-stress attenuators including BI-1.
Mechanism ROS and ethylene mediated cell death in stressed roots with AtPgb1 suppression.
Intervention effect Suppressing ROS synthesis or ethylene perception reduced cell death.
Intervention effect Suppressing ROS synthesis or ethylene perception partly restored root growth.
Observation PEG-induced root growth cessation followed loss of cell and tissue specification in the meristem.
Observation AtPgb1 overexpression attenuated, and suppression aggravated, root meristem changes.
Intervention effect AtPgb1 suppression compromised quiescent cell function.
Intervention effect AtPgb1 suppression rapidly reduced meristem size.
Observation SCR and WER expression and localization were most affected in PEG-treated roots with suppressed AtPgb1.

Plant stem cells under low oxygen: metabolic rewiring by phytoglobin underlies stem cell functionality 3

Show all 3 →

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Hypoxia degraded QC stem cells and inhibited root growth.

Taxon: maizeZea mayse1
Treatment: hypoxic stresse0
Outcome: degradation with subsequent inhibition of root growthe0
Direction: inhibitione0

Not reportedComparator

Verbatim

e0
“QC stem cells are vulnerable to hypoxic stress, which causes their degradation with subsequent inhibition of root growth”
✓ located verbatim in the source · abstract, characters 222–342

e1
“Root growth in maize (Zea mays L.)”
✓ located verbatim in the source · abstract, characters 0–34

Title

Plant stem cells under low oxygen: metabolic rewiring by phytoglobin underlies stem cell functionality

Mohammed M Mira; Robert D Hill; Alexander Hilo; et al. PLANT PHYSIOLOGY 2023. doi:10.1093/plphys/kiad344

Other claims from this paper (8)

Intervention effect Low oxygen depleted starch and soluble sugars in QC stem cells.
Intervention effect Low oxygen increased QC reliance on glycolytic fermentation and impaired the TCA cycle.
Intervention effect Hypoxia did not activate PDC and ADH genes in the QC.
Intervention effect ADH activity increased under hypoxia.
Intervention effect PEP increased with little change in succinate under low oxygen.
Intervention effect Succinate levels changed little under low oxygen.
Intervention effect ZmPgb1.1 overexpression preserved QC stem cell function during stress.
Mechanism ZmPgb1.1-associated QC preservation involved TCA activation and retained carbohydrate storage.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Low oxygen depleted starch and soluble sugars in QC stem cells.

Taxon: maizeZea mayse1
Treatment: low oxygene0
Outcome: starch and soluble sugarse0
Direction: depletede0

Not reportedComparator

Verbatim

e0
“Under low oxygen, QC stem cells became depleted of starch and soluble sugars”
✓ located verbatim in the source · abstract, characters 344–420

e1
“Root growth in maize (Zea mays L.)”
✓ located verbatim in the source · abstract, characters 0–34

Title

Plant stem cells under low oxygen: metabolic rewiring by phytoglobin underlies stem cell functionality

Mohammed M Mira; Robert D Hill; Alexander Hilo; et al. PLANT PHYSIOLOGY 2023. doi:10.1093/plphys/kiad344

Other claims from this paper (8)

Intervention effect Hypoxia degraded QC stem cells and inhibited root growth.
Intervention effect Low oxygen increased QC reliance on glycolytic fermentation and impaired the TCA cycle.
Intervention effect Hypoxia did not activate PDC and ADH genes in the QC.
Intervention effect ADH activity increased under hypoxia.
Intervention effect PEP increased with little change in succinate under low oxygen.
Intervention effect Succinate levels changed little under low oxygen.
Intervention effect ZmPgb1.1 overexpression preserved QC stem cell function during stress.
Mechanism ZmPgb1.1-associated QC preservation involved TCA activation and retained carbohydrate storage.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Low oxygen increased QC reliance on glycolytic fermentation and impaired the TCA cycle.

Taxon: maizeZea mayse1
Treatment: low oxygene0
Gene: pyruvate dehydrogenase (PDH)e0
Outcome: impairment of the TCA cyclee0
Direction: impairmente0

Not reportedComparator

Verbatim

e0
“Under low oxygen, QC stem cells became depleted of starch and soluble sugars and exhibited reliance on glycolytic fermentation with the impairment of the TCA cycle through the depressed activity of several enzymes, including pyruvate dehydrogenase (PDH)”
✓ located verbatim in the source · abstract, characters 344–597

e1
“Root growth in maize (Zea mays L.)”
✓ located verbatim in the source · abstract, characters 0–34

Title

Plant stem cells under low oxygen: metabolic rewiring by phytoglobin underlies stem cell functionality

Mohammed M Mira; Robert D Hill; Alexander Hilo; et al. PLANT PHYSIOLOGY 2023. doi:10.1093/plphys/kiad344

Other claims from this paper (8)

Intervention effect Hypoxia degraded QC stem cells and inhibited root growth.
Intervention effect Low oxygen depleted starch and soluble sugars in QC stem cells.
Intervention effect Hypoxia did not activate PDC and ADH genes in the QC.
Intervention effect ADH activity increased under hypoxia.
Intervention effect PEP increased with little change in succinate under low oxygen.
Intervention effect Succinate levels changed little under low oxygen.
Intervention effect ZmPgb1.1 overexpression preserved QC stem cell function during stress.
Mechanism ZmPgb1.1-associated QC preservation involved TCA activation and retained carbohydrate storage.

Arbuscular mycorrhizal fungi against the false root-knot nematode activity inCapsicum annuum: physiological responses in plants 2

Show all 2 →

Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Infected roots were associated with accumulation of proline and sugar in pepper.

Taxon: Capsicum annuumCapsicum annuumt0
Treatment: infected rootse4
Outcome: proline, sugare4
Direction: accumulatione4

Verbatim

t0
“inCapsicum annuum”
✓ located verbatim in the source · title, characters 75–92

e4
“The loss of functionality of infected roots in the plants induced water stress, reflected by the accumulation of proline, sugar and increased the relative conductivity of cell membranes”
✓ located verbatim in the source · abstract, characters 1225–1410

Title

Arbuscular mycorrhizal fungi against the false root-knot nematode activity inCapsicum annuum: physiological responses in plants

Valeria Fernanda Bernardo; Sebastian Andrés Garita; Maria Cecilia Arango; et al. Biocontrol Science and Technology 2020. doi:10.1080/09583157.2020.1833304

Other claims from this paper (9)

Intervention effect Parasitism by N. aberrans increased mycorrhization percentages in pepper compared with non-parasitised plants.
Intervention effect Mycorrhizae reduced the final population of nematodes on pepper.
Intervention effect Parasitism by N. aberrans decreased soluble protein and chlorophyll content of pepper in the absence of AMF.
Association Infected roots were associated with increased relative conductivity of cell membranes in pepper.
Association Phenolic compounds accumulated in pepper as a product of pathogenesis.
Intervention effect Inoculation with AMF decreased proline, sugars and phenolic compounds content of pepper relative to plants without AMF.
Intervention effect Inoculation with AMF decreased relative conductivity of cell membranes in pepper relative to plants without AMF.
Recommendation The authors recommend AMF use in pepper production to reduce N. aberrans populations.
Association Rhizophagus intraradices B1 was the most promising AMF strain tested for reducing N. aberrans in pepper.

Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Infected roots were associated with increased relative conductivity of cell membranes in pepper.

Taxon: Capsicum annuumCapsicum annuumt0
Treatment: infected rootse4
Outcome: relative conductivity of cell membranese4
Direction: increasede4

Verbatim

t0
“inCapsicum annuum”
✓ located verbatim in the source · title, characters 75–92

e4
“The loss of functionality of infected roots in the plants induced water stress, reflected by the accumulation of proline, sugar and increased the relative conductivity of cell membranes”
✓ located verbatim in the source · abstract, characters 1225–1410

Title

Arbuscular mycorrhizal fungi against the false root-knot nematode activity inCapsicum annuum: physiological responses in plants

Valeria Fernanda Bernardo; Sebastian Andrés Garita; Maria Cecilia Arango; et al. Biocontrol Science and Technology 2020. doi:10.1080/09583157.2020.1833304

Other claims from this paper (9)

Intervention effect Parasitism by N. aberrans increased mycorrhization percentages in pepper compared with non-parasitised plants.
Intervention effect Mycorrhizae reduced the final population of nematodes on pepper.
Intervention effect Parasitism by N. aberrans decreased soluble protein and chlorophyll content of pepper in the absence of AMF.
Association Infected roots were associated with accumulation of proline and sugar in pepper.
Association Phenolic compounds accumulated in pepper as a product of pathogenesis.
Intervention effect Inoculation with AMF decreased proline, sugars and phenolic compounds content of pepper relative to plants without AMF.
Intervention effect Inoculation with AMF decreased relative conductivity of cell membranes in pepper relative to plants without AMF.
Recommendation The authors recommend AMF use in pepper production to reduce N. aberrans populations.
Association Rhizophagus intraradices B1 was the most promising AMF strain tested for reducing N. aberrans in pepper.

Oxidative Stress Produced by Paraquat Reduces Nitrogen Fixation in Soybean-Bradyrhizobium diazoefficiens Symbiosis by Decreasing Nodule Functionality 2

Show all 2 →

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Paraquat statistically reduced soybean shoot and root dry weight.

Taxon: soybeanGlycine maxe0
Treatment: paraquat additione0
Interactor: Bradyrhizobium diazoefficiensBradyrhizobium diazoefficienst0symbionte0
Outcome: shoot and root dry weighte0
Direction: reducede0

Not reportedComparator

Verbatim

e0
“In symbiosis with soybean, the paraquat addition statistically reduced the shoot and root dry weight of soybean plants, and number and development of the nodules.”
✓ located verbatim in the source · abstract, characters 648–810

t0
“Bradyrhizobium diazoefficiens”
✓ located verbatim in the source · title, characters 75–104

Title

Oxidative Stress Produced by Paraquat Reduces Nitrogen Fixation in Soybean-Bradyrhizobium diazoefficiens Symbiosis by Decreasing Nodule Functionality

Germán Tortosa; Sergio Parejo; Juan J. Cabrera; et al. Nitrogen 2021. doi:10.3390/nitrogen2010003

Other claims from this paper (8)

Observation The free living Bradyrhizobium tolerated paraquat up to a 50 µM threshold.
Intervention effect Paraquat reduced nodule number and development.
Intervention effect Paraquat negatively affected symbiotic nitrogen fixation.
Intervention effect At 100 µM paraquat, total nitrogen content fell close to 50%.
Intervention effect At 100 µM paraquat, fixed nitrogen fell close to 50%.
Mechanism The authors attribute these effects to impaired nodule functionality and oxidative status.
Intervention effect Paraquat treated nodules had lower leghaemoglobin content.
Intervention effect Paraquat treated nodules had higher lipid peroxidation.

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Paraquat reduced nodule number and development.

Taxon: soybeanGlycine maxe0
Treatment: paraquat additione0
Outcome: number and development of the nodulese0
Direction: reducede0

Not reportedComparator

Verbatim

e0
“In symbiosis with soybean, the paraquat addition statistically reduced the shoot and root dry weight of soybean plants, and number and development of the nodules.”
✓ located verbatim in the source · abstract, characters 648–810

Title

Oxidative Stress Produced by Paraquat Reduces Nitrogen Fixation in Soybean-Bradyrhizobium diazoefficiens Symbiosis by Decreasing Nodule Functionality

Germán Tortosa; Sergio Parejo; Juan J. Cabrera; et al. Nitrogen 2021. doi:10.3390/nitrogen2010003

Other claims from this paper (8)

Observation The free living Bradyrhizobium tolerated paraquat up to a 50 µM threshold.
Intervention effect Paraquat statistically reduced soybean shoot and root dry weight.
Intervention effect Paraquat negatively affected symbiotic nitrogen fixation.
Intervention effect At 100 µM paraquat, total nitrogen content fell close to 50%.
Intervention effect At 100 µM paraquat, fixed nitrogen fell close to 50%.
Mechanism The authors attribute these effects to impaired nodule functionality and oxidative status.
Intervention effect Paraquat treated nodules had lower leghaemoglobin content.
Intervention effect Paraquat treated nodules had higher lipid peroxidation.

Degradation of soil arbuscular mycorrhizal fungal diversity and functionality accompanied by the aggravation of pepper Phytophthora blight in a facility shed in Southwest China 2

Show all 2 →

Associationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Root AM colonization decreased significantly with blight severity.

Taxon: peppert0
Interactor: AM fungiGlomeromycotae0symbiont
Outcome: root colonization ratee0
Direction: decreasese0

Verbatim

e0
“there were significant decreases in root colonization rate and the diversity indices rather than the abundance of soil AM fungi.”
✓ located verbatim in the source · abstract, characters 833–961

t0
“pepper”
✓ located verbatim in the source · title, characters 112–118

Title

Degradation of soil arbuscular mycorrhizal fungal diversity and functionality accompanied by the aggravation of pepper Phytophthora blight in a facility shed in Southwest China

Minghui Li; Peng Cai; Shaowei Hou; et al. Land Degradation and Development 2022. doi:10.1002/ldr.4228

Other claims from this paper (7)

Association Soil P. capsici populations increased with pepper disease severity.
Association Soil AM fungal diversity indices decreased significantly with blight severity.
Association Soil AM fungal abundance did not decrease with severity.
Association Root AM colonization negatively correlated with soil P. capsici population.
Association AM diversity indices negatively correlated with soil P. capsici population.
Association High severity altered the soil AM fungal community relative to low severity.
Association High severity replaced Glomus phylotypes with Paraglomus phylotypes.

Associationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Soil AM fungal diversity indices decreased significantly with blight severity.

Taxon: peppert0
Interactor: AM fungiGlomeromycotae0symbiont
Outcome: diversity indicese0
Direction: decreasese0

Verbatim

e0
“there were significant decreases in root colonization rate and the diversity indices rather than the abundance of soil AM fungi.”
✓ located verbatim in the source · abstract, characters 833–961

t0
“pepper”
✓ located verbatim in the source · title, characters 112–118

Title

Degradation of soil arbuscular mycorrhizal fungal diversity and functionality accompanied by the aggravation of pepper Phytophthora blight in a facility shed in Southwest China

Minghui Li; Peng Cai; Shaowei Hou; et al. Land Degradation and Development 2022. doi:10.1002/ldr.4228

Other claims from this paper (7)

Association Soil P. capsici populations increased with pepper disease severity.
Association Root AM colonization decreased significantly with blight severity.
Association Soil AM fungal abundance did not decrease with severity.
Association Root AM colonization negatively correlated with soil P. capsici population.
Association AM diversity indices negatively correlated with soil P. capsici population.
Association High severity altered the soil AM fungal community relative to low severity.
Association High severity replaced Glomus phylotypes with Paraglomus phylotypes.

Veterinary drug albendazole inhibits root colonization and symbiotic function of the arbuscular mycorrhizal fungus Rhizophagus irregularis 2

Show all 2 →

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Albendazole impaired arbuscule development and function at 0.75 μg g-1.

Taxon: Lotus japonicusLotus japonicuse1
Treatment: albendazolee0
Interactor: AMFe0symbiont
Outcome: development and functionality of arbusculese0
Direction: negative effectse0
Value: 0.75 μg g-1e0

Not reportedComparator

Verbatim

e0
“Our analyses revealed negative effects of albendazole on the development and functionality of arbuscules, the symbiotic organelle of AMF, at a concentration of 0.75 μg g-1.”
✓ located verbatim in the source · abstract, characters 760–932

e1
“the model-legume Lotus japonicus and the AMF Rhizophagus irregularis”
✓ located verbatim in the source · abstract, characters 690–758

Title

Veterinary drug albendazole inhibits root colonization and symbiotic function of the arbuscular mycorrhizal fungus Rhizophagus irregularis

Eleni Gkimprixi; Stathis Lagos; Christina N Nikolaou; et al. FEMS Microbiology Ecology 2023. doi:10.1093/femsec/fiad048

Other claims from this paper (3)

Intervention effect Albendazole reduced expression of arbuscule formation and nutrient uptake genes.
Intervention effect Albendazole-treated plants had lower shoot phosphorus content.
Observation Albendazole was toxic to colonization capacity and function of R. irregularis at agriculturally plausible concentrations.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Albendazole reduced expression of arbuscule formation and nutrient uptake genes.

Taxon: Lotus japonicusLotus japonicuse1
Treatment: albendazolee2
Gene: SbtM1, PT4 and AMT2;2e0
Outcome: expression of genes SbtM1, PT4 and AMT2;2e0
Direction: reducede0

Not reportedComparator

Verbatim

e0
“The impairment of the symbiotic function was verified by the reduced expression of genes SbtM1, PT4 and AMT2;2 involved in arbuscules formation, P and N uptake”
✓ located verbatim in the source · abstract, characters 933–1092

e1
“the model-legume Lotus japonicus and the AMF Rhizophagus irregularis”
✓ located verbatim in the source · abstract, characters 690–758

e2
“Our analyses revealed negative effects of albendazole on the development and functionality of arbuscules, the symbiotic organelle of AMF, at a concentration of 0.75 μg g-1.”
✓ located verbatim in the source · abstract, characters 760–932

Title

Veterinary drug albendazole inhibits root colonization and symbiotic function of the arbuscular mycorrhizal fungus Rhizophagus irregularis

Eleni Gkimprixi; Stathis Lagos; Christina N Nikolaou; et al. FEMS Microbiology Ecology 2023. doi:10.1093/femsec/fiad048

Other claims from this paper (3)

Intervention effect Albendazole impaired arbuscule development and function at 0.75 μg g-1.
Intervention effect Albendazole-treated plants had lower shoot phosphorus content.
Observation Albendazole was toxic to colonization capacity and function of R. irregularis at agriculturally plausible concentrations.

In vitro rooting of Quercus robur, activated charcoal vs. exogenous auxin: a morphophysiological approach 2

Show all 2 →

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Without exogenous auxins and activated charcoal, oak plantlets had weak root development and reduced functionality.

Taxon: Quercus roburQuercus roburt0
Treatment: without exogenous auxins and ACe0
Outcome: weak root development, reduced functionalitye0

Not reportedDirection

Verbatim

e0
“Plantlets grown without exogenous auxins and AC displayed weak root development, reduced functionality, lower photosynthetic pigments, and elevated starch and free IAA content”
✓ located verbatim in the source · abstract, characters 412–587

t0
“Quercus robur”
✓ located verbatim in the source · title, characters 20–33

Title

In vitro rooting of Quercus robur, activated charcoal vs. exogenous auxin: a morphophysiological approach

João Paulo Rodrigues Martins; Mikołaj Krzysztof Wawrzyniak; Ewa Marzena Kalemba; et al. Plant Cell Tissue and Organ Culture (PCTOC) 2023. doi:10.1007/s11240-023-02656-7

Other claims from this paper (9)

Observation Without exogenous auxins and activated charcoal, plantlets had lower photosynthetic pigments.
Observation Without exogenous auxins and activated charcoal, plantlets had elevated starch and free IAA content.
Intervention effect IAA or IBA application induced aerenchyma formation.
Intervention effect IAA or IBA application increased hydrogen peroxide.
Intervention effect IAA or IBA application reduced free IAA levels.
Intervention effect Activated charcoal increased plantlet biomass.
Intervention effect Activated charcoal increased photosynthetic pigments.
Intervention effect Activated charcoal raised the total performance index of the photosynthetic apparatus.
Intervention effect Activated charcoal improved rooting success and morphophysiological condition regardless of exogenous auxins.

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Without exogenous auxins and activated charcoal, plantlets had lower photosynthetic pigments.

Taxon: Quercus roburQuercus roburt0
Outcome: photosynthetic pigmentse0
Direction: lowere0

Verbatim

e0
“Plantlets grown without exogenous auxins and AC displayed weak root development, reduced functionality, lower photosynthetic pigments, and elevated starch and free IAA content”
✓ located verbatim in the source · abstract, characters 412–587

t0
“Quercus robur”
✓ located verbatim in the source · title, characters 20–33

Title

In vitro rooting of Quercus robur, activated charcoal vs. exogenous auxin: a morphophysiological approach

João Paulo Rodrigues Martins; Mikołaj Krzysztof Wawrzyniak; Ewa Marzena Kalemba; et al. Plant Cell Tissue and Organ Culture (PCTOC) 2023. doi:10.1007/s11240-023-02656-7

Other claims from this paper (9)

Observation Without exogenous auxins and activated charcoal, oak plantlets had weak root development and reduced functionality.
Observation Without exogenous auxins and activated charcoal, plantlets had elevated starch and free IAA content.
Intervention effect IAA or IBA application induced aerenchyma formation.
Intervention effect IAA or IBA application increased hydrogen peroxide.
Intervention effect IAA or IBA application reduced free IAA levels.
Intervention effect Activated charcoal increased plantlet biomass.
Intervention effect Activated charcoal increased photosynthetic pigments.
Intervention effect Activated charcoal raised the total performance index of the photosynthetic apparatus.
Intervention effect Activated charcoal improved rooting success and morphophysiological condition regardless of exogenous auxins.

Silicon-induced photosynthetic adaptations in common buckwheat under salt stress revealed by prompt chlorophyll a fluorescence analysis 2

Show all 2 →

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Salt stress produced a positive K-band indicating OEC damage.

Taxon: common buckwheatFagopyrum esculentume0 t0 e1
Outcome: positive K-bande0 t0 e1

Verbatim

e0
“emergence of a positive K-band indicating damage to the oxygen-evolving complex (OEC)”
✓ located verbatim in the source · abstract, characters 596–681

t0
“Silicon-induced photosynthetic adaptations in common buckwheat under salt stress revealed by prompt chlorophyll a fluorescence analysis”
✓ located verbatim in the source · title, characters 0–135

e1
“Silicon-treated plants under salt stress exhibited enhanced photochemical quenching, reduced regulatory energy dissipation, and decreased photosystem I (PSI) over-reduction. A significant increase in open PSI centers was observed, improving the balance and functionality between PSI and photosystem II. The application of Si resulted in significant photosynthetic improvements, which were also paired with enhanced morph…” Show full quote
✓ located verbatim in the source · abstract, characters 921–1428

Title

Silicon-induced photosynthetic adaptations in common buckwheat under salt stress revealed by prompt chlorophyll a fluorescence analysis

Md. Rakib Hossain Raihan; Michal Antala; Marcin Stróżecki; et al. Scientific Reports 2025. doi:10.1038/s41598-025-04159-1

Other claims from this paper (9)

Intervention effect Salt stress disrupted PSII energy flow and electron transport.
Intervention effect Silicon stabilized OEC and thylakoid integrity under salt stress.
Intervention effect Silicon improved JIP parameters and reduced excess energy absorption, dissipation and loss.
Intervention effect Silicon enhanced photochemical quenching under salt stress.
Intervention effect Silicon reduced regulatory energy dissipation.
Intervention effect Silicon decreased PSI over-reduction.
Intervention effect Silicon significantly increased open PSI centers.
Intervention effect Silicon significantly improved photosynthesis.
Intervention effect Silicon increased root length and leaf thickness in saline conditions.

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salt stress disrupted PSII energy flow and electron transport.

Taxon: common buckwheatFagopyrum esculentume0 t0 e1
Treatment: Salt stresse0 t0 e1
Outcome: energy flow and electron transport in photosystem II (PSII)e0 t0 e1
Direction: disruptinge0 t0 e1

Not reportedComparator

Verbatim

e0
“Salt stress significantly altered the chlorophyll a fluorescence transient (OJIP) curve, disrupting energy flow and electron transport in photosystem II (PSII)”
✓ located verbatim in the source · abstract, characters 374–533

t0
“Silicon-induced photosynthetic adaptations in common buckwheat under salt stress revealed by prompt chlorophyll a fluorescence analysis”
✓ located verbatim in the source · title, characters 0–135

e1
“Silicon-treated plants under salt stress exhibited enhanced photochemical quenching, reduced regulatory energy dissipation, and decreased photosystem I (PSI) over-reduction. A significant increase in open PSI centers was observed, improving the balance and functionality between PSI and photosystem II. The application of Si resulted in significant photosynthetic improvements, which were also paired with enhanced morph…” Show full quote
✓ located verbatim in the source · abstract, characters 921–1428

Title

Silicon-induced photosynthetic adaptations in common buckwheat under salt stress revealed by prompt chlorophyll a fluorescence analysis

Md. Rakib Hossain Raihan; Michal Antala; Marcin Stróżecki; et al. Scientific Reports 2025. doi:10.1038/s41598-025-04159-1

Other claims from this paper (9)

Observation Salt stress produced a positive K-band indicating OEC damage.
Intervention effect Silicon stabilized OEC and thylakoid integrity under salt stress.
Intervention effect Silicon improved JIP parameters and reduced excess energy absorption, dissipation and loss.
Intervention effect Silicon enhanced photochemical quenching under salt stress.
Intervention effect Silicon reduced regulatory energy dissipation.
Intervention effect Silicon decreased PSI over-reduction.
Intervention effect Silicon significantly increased open PSI centers.
Intervention effect Silicon significantly improved photosynthesis.
Intervention effect Silicon increased root length and leaf thickness in saline conditions.

Effects of Ni2+ toxicity on Hill reaction and membrane functionality in maize 2

Show all 2 →

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

In maize, cell death of root tips increased under nickel exposure.

Taxon: maizeZea mayst0
Treatment: Different concentrations of nickele0
Outcome: cell death of root tipse0
Direction: increasede0

Not reportedComparator

Verbatim

e0
“Different concentrations of nickel increased the K+ efflux and sugar leakage from roots to the culture and the cell death of root tips.”
✓ located verbatim in the source · abstract, characters 1073–1208

t0
“Effects of Ni2+ toxicity on Hill reaction and membrane functionality in maize”
✓ located verbatim in the source · title, characters 0–77

Title

Effects of Ni2+ toxicity on Hill reaction and membrane functionality in maize

Fatemeh Ghasemi; Reza Heidari; Rashid Jameii; et al. DOAJ (DOAJ: Directory of Open Access Journals) 2012

Other claims from this paper (5)

Intervention effect In maize, content of chlorophyll a increased under nickel exposure.
Intervention effect In maize, content of chlorophyll a decreased under nickel exposure.
Intervention effect In maize, chlorophyll b and carotinoids content no significant changes under nickel exposure.
Intervention effect In maize, rate of Hill reaction decreased under nickel exposure.
Intervention effect In maize, K+ efflux and sugar leakage increased under nickel exposure.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

In maize, K+ efflux and sugar leakage increased under nickel exposure.

Taxon: maizeZea mayst0
Treatment: Different concentrations of nickele0
Outcome: K+ efflux and sugar leakagee0
Direction: increasede0

Not reportedComparator

Verbatim

e0
“Different concentrations of nickel increased the K+ efflux and sugar leakage from roots to the culture and the cell death of root tips.”
✓ located verbatim in the source · abstract, characters 1073–1208

t0
“Effects of Ni2+ toxicity on Hill reaction and membrane functionality in maize”
✓ located verbatim in the source · title, characters 0–77

Title

Effects of Ni2+ toxicity on Hill reaction and membrane functionality in maize

Fatemeh Ghasemi; Reza Heidari; Rashid Jameii; et al. DOAJ (DOAJ: Directory of Open Access Journals) 2012

Other claims from this paper (5)

Intervention effect In maize, content of chlorophyll a increased under nickel exposure.
Intervention effect In maize, content of chlorophyll a decreased under nickel exposure.
Intervention effect In maize, chlorophyll b and carotinoids content no significant changes under nickel exposure.
Intervention effect In maize, rate of Hill reaction decreased under nickel exposure.
Intervention effect In maize, cell death of root tips increased under nickel exposure.

Lexical search (BM25). All words must match; if nothing does, any word. Organism names also match every spelling of the same organism. No semantic search yet.

“root functionality”

Claim types

Direction of the findings

Over time

Claim type

Research area

Polarity

Statistics

Aquaporin functionality in relation to H⁺‐ATPase activity in root cells of Capsicum annuum grown under salinity 3

Expression of Arabidopsis class 1 phytoglobin (AtPgb1) delays death and degradation of the root apical meristem during severe PEG-induced water deficit 3

Plant stem cells under low oxygen: metabolic rewiring by phytoglobin underlies stem cell functionality 3

Arbuscular mycorrhizal fungi against the false root-knot nematode activity inCapsicum annuum: physiological responses in plants 2

Oxidative Stress Produced by Paraquat Reduces Nitrogen Fixation in Soybean-Bradyrhizobium diazoefficiens Symbiosis by Decreasing Nodule Functionality 2

Degradation of soil arbuscular mycorrhizal fungal diversity and functionality accompanied by the aggravation of pepper Phytophthora blight in a facility shed in Southwest China 2

Veterinary drug albendazole inhibits root colonization and symbiotic function of the arbuscular mycorrhizal fungus Rhizophagus irregularis 2

In vitro rooting of Quercus robur, activated charcoal vs. exogenous auxin: a morphophysiological approach 2

Silicon-induced photosynthetic adaptations in common buckwheat under salt stress revealed by prompt chlorophyll a fluorescence analysis 2

Effects of Ni2+ toxicity on Hill reaction and membrane functionality in maize 2

“root functionality”

Claim types

Direction of the findings

Over time

Claim type

Research area

Polarity

Statistics

Aquaporin functionality in relation to H+‐ATPase activity in root cells of Capsicum annuum grown under salinity 3

Expression of Arabidopsis class 1 phytoglobin (AtPgb1) delays death and degradation of the root apical meristem during severe PEG-induced water deficit 3

Plant stem cells under low oxygen: metabolic rewiring by phytoglobin underlies stem cell functionality 3

Arbuscular mycorrhizal fungi against the false root-knot nematode activity inCapsicum annuum: physiological responses in plants 2

Oxidative Stress Produced by Paraquat Reduces Nitrogen Fixation in Soybean-Bradyrhizobium diazoefficiens Symbiosis by Decreasing Nodule Functionality 2

Degradation of soil arbuscular mycorrhizal fungal diversity and functionality accompanied by the aggravation of pepper Phytophthora blight in a facility shed in Southwest China 2

Veterinary drug albendazole inhibits root colonization and symbiotic function of the arbuscular mycorrhizal fungus Rhizophagus irregularis 2

In vitro rooting of Quercus robur, activated charcoal vs. exogenous auxin: a morphophysiological approach 2

Silicon-induced photosynthetic adaptations in common buckwheat under salt stress revealed by prompt chlorophyll a fluorescence analysis 2

Effects of Ni2+ toxicity on Hill reaction and membrane functionality in maize 2

Aquaporin functionality in relation to H⁺‐ATPase activity in root cells of Capsicum annuum grown under salinity 3