Search claims · PlantClaims

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

PepMV-P22 reduced symptom severity after PepMV-P22 K67E challenge relative to unprotected tomato plants, although necrosis appeared two months later.

Taxon: tomatoSolanum lycopersicume1
Treatment: mild PepMV-P22e2
Interactor: PepMV-P22 K67Ee0pathogen
Second interactor: PepMV-P22e2pathogen
Outcome: symptoms severitye0
Direction: reducede0
Qualifier: necrotic symptoms appeared two months after coinfectione0
Comparator: non-protected plantse0

Verbatim

e0
“After a challenge inoculation with PepMV-P19 or PepMV-P22 K67E symptoms severity were significantly reduced in comparison to non-protected plants; however, necrotic symptoms appeared two months after coinfection”
✓ located verbatim in the source · abstract, characters 801–1012

e1
“protect tomato against more aggressive challenge isolates”
✓ located verbatim in the source · abstract, characters 415–472

e2
“using mild PepMV-P22”
✓ located verbatim in the source · abstract, characters 759–779

Title

Cross-protection between different pathotypes of Pepino mosaic virus representing Chilean 2 genotype.

Beata Hasiów‐Jaroszewska; Julia Minicka; H. Pospieszny DOAJ (DOAJ: Directory of Open Access Journals) 2014

Other claims from this paper (3)

Intervention effect Mild PepMV-P22 provided efficient cross-protection against PepMV-P5-IY in tomato.
Intervention effect PepMV-P22 reduced symptom severity after PepMV-P19 challenge relative to unprotected tomato plants, although necrosis appeared two months later.
Observation The necrotic isolate accumulated 5–7 times more than PepMV-P22 in tomato.

Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors suggest protein abundance shifts may affect growth and energy formation.

Taxon: Nicotiana benthamianaNicotiana benthamianat0
Interactor: PPVe0pathogen
Outcome: plant growth and initiate energy formation via gluconeogenesise0
Qualifier: Shifts in the abundance of proteinse0

Verbatim

t0
“Nicotiana benthamiana”
✓ located verbatim in the source · title, characters 78–99

e0
“Shifts in the abundance of proteins that are involved in stimulation of photosynthetic capacity, modification of amino acid, and carbohydrate metabolism may affect plant growth and initiate energy formation via gluconeogenesis in PPV infected N. benthamiana”
✓ located verbatim in the source · abstract, characters 1334–1591

Title

Photosynthetic and Stress Responsive Proteins Are Altered More Effectively in Nicotiana benthamiana Infected with Plum pox virus Aggressive PPV-CR versus Mild PPV-C Cherry-Adapted Isolates

Slavomíra Nováková; Maksym Danchenko; Ludovit Skultety; et al. Journal of Proteome Research 2018. doi:10.1021/acs.jproteome.8b00230

Other claims from this paper (6)

Intervention effect PPV-CR infection accumulated more PPV capsid protein than PPV-C infection.
Association Capsid accumulation correlated with symptoms in infected plants.
Observation Viral infection significantly altered 38 unique plant proteins.
Intervention effect PPV-CR affected photosynthesis-related protein abundances more strongly than PPV-C.
Observation PPV-CR infected leaves had significantly reduced photosynthetic pigments.
Mechanism The authors suggest H2O2 accumulation in PPV-CR infected leaves activates glutathione synthesis in plant defense and development.

Associationobservedoriginal resultmeasured

Claim · model-written summary

TF1 caused similar symptom severity to race 4 isolate 89-1A on Pima cotton.

Taxon: Pima cottone0
Interactor: Fove1pathogen
Outcome: symptom severitye0
Direction: similare0
Comparator: race 4 isolate 89-1Ae0

Verbatim

e0
“haplotype A isolate TF1 was more aggressive than the race 4 isolate 89-1A on Upland cotton and had similar symptom severity on Pima cotton.”
✓ located verbatim in the source · abstract, characters 1011–1150

e1
“Fusarium wilt, caused by the soilborne fungal pathogen Fusarium oxysporum f. sp. vasinfectum ( Fov), was estimated to cause a $21 million cotton yield loss in 2022.”
✓ located verbatim in the source · abstract, characters 103–267

Title

Evaluation of the Genetic Diversity, Haplotype, and Virulence of Fusarium oxysporum f. sp. vasinfectum Field Isolates from Alabama

Miranda Otero; Ambika Pokhrel; Seungyeon Seo; et al. Phytopathology 2024. doi:10.1094/phyto-11-23-0438-r

Other claims from this paper (7)

Observation Fov field isolates from Alabama were placed in 18 haplotypes.
Observation No race 4 Fov isolates were recovered in Alabama.
Intervention effect Every field isolate haplotype representative caused disease on Upland cotton Rowden.
Observation Two haplotype A isolates were the most aggressive recovered.
Association Haplotype A isolate TF1 was more aggressive than race 4 isolate 89-1A on Upland cotton.
Observation Fov isolates had many small chromosomes and variable karyotypes.
Observation The authors concluded Alabama Fov isolates are genetically diverse.

Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

An isolate or mutant not producing these toxins in vitro is still pathogenic on grapevine.

Taxon: grapevineVitise4
Interactor: Neofusicoccum parvumNeofusicoccum parvume1pathogen
Outcome: pathogenice0
Qualifier: non-producing these toxins in vitroe0

Verbatim

e1
“Two Neofusicoccumparvum isolates and a UV mutant were characterized for their phytotoxin production in vitro, their pathogenicity on grapevine, and their genome sequenced”
✓ located verbatim in the source · abstract, characters 0–170

e4
“The isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin and high amounts of (R)-mellein, but it was less aggressive on grapevine than Np-Bt67”
✓ located verbatim in the source · abstract, characters 386–542

e0
“since isolate/mutant non-producing these toxins in vitro is pathogenic”
✓ located verbatim in the source · abstract, characters 1331–1401

Title

Diversity of Neofusicoccum parvum for the Production of the Phytotoxic Metabolites (-)-Terremutin and (R)-Mellein

Patricia Trotel-Aziz; Guillaume Robert-Siegwald; Olivier Fernandez; et al. Journal of Fungi 2022. doi:10.3390/jof8030319

Other claims from this paper (12)

Association Isolate Np-Bt67 produced a high level of (-)-terremutin and almost no (R)-mellein.
Association Isolate Np-Bt67 was the most aggressive on grapevine, triggering apoplexy.
Intervention effect Purified (-)-terremutin did not induce similar symptoms on grapevine.
Association Isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin than Np-Bt67.
Association Isolate Bourgogne S-116 (Np-B) produced high amounts of (R)-mellein.
Association Isolate Bourgogne S-116 (Np-B) was less aggressive on grapevine than Np-Bt67.
Association UV9 mutant no longer produced (-)-terremutin.
Association UV9 mutant overproduced (R)-mellein by 2.5-fold.
Association UV9 mutant was as pathogenic on grapevine as its parent.
Observation NpB-UV9 differed from its parent by simple mutations in two genes, one of them the transcription factor UCR-NP2_6692.
Association Challenge with N. parvum or purified phytotoxins upregulated SA-dependent defenses in grapevine.
Association (-)-terremutin interfered with JA/ET-dependent defenses of grapevine.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

PVY NTN did not activate early differential expression of Fe‐superoxide dismutase and pectin methylesterase inhibitor genes, indicating a delayed response relative to PVY N.

Taxon: potatoSolanum tuberosumt0
Treatment: PVY NTN isolatee0
Interactor: PVY NTNe0pathogen
Outcome: early differential expression of the Fe‐superoxide dismutase and pectin methylesterase inhibitor (PMEI) genese0
Direction: did not activatee0
Comparator: PVY N inoculatione0

Verbatim

e0
“The PVY NTN isolate did not activate early differential expression of the Fe‐superoxide dismutase and pectin methylesterase inhibitor (PMEI) genes, indicating a delay in plant response relative to that following PVY N inoculation.”
✓ located verbatim in the source · abstract, characters 949–1179

t0
“potato plants”
✓ located verbatim in the source · title, characters 96–109

Title

Aggressive and mild Potato virus Y isolates trigger different specific responses in susceptible potato plants

P. Kogovšek; M. Pompe‐Novak; Š. Baebler; et al. Plant Pathology 2010. doi:10.1111/j.1365-3059.2010.02340.x

Other claims from this paper (6)

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

RIRS-K induced the maximum relative lesion height of 32.7% on Pusa Basmati-1.

Taxon: riceOryza sativat0
Material: Pusa Basmati-1e0
Interactor: R. solaniRhizoctonia solanie0pathogen
Outcome: relative lesion height (RLH)e0
Direction: maximume0
Value: 32.7%e0
Qualifier: RIRS-Ke0

Verbatim

t0
“rice (Oryza sativa L.)”
✓ located verbatim in the source · title, characters 31–53

e0
“An aggressive R. solani strain, RIRS-K, was first identified among six isolates, RIRS-K, RIRS-17, RIRS-S, RIRS-T, RIRS-MU and RIRS-FD, for inducing a maximum relative lesion height (RLH) of 32.7% on a ShB susceptible cultivar, Pusa Basmati-1.”
✓ located verbatim in the source · abstract, characters 256–498

Title

Biocontrol of sheath blight of rice (Oryza sativa L.) through alteration in expression dynamics of candidate effector genes of Rhizoctonia solani AG1-IA during pathogenesis

Wadzani Palnam Dauda; Veerubommu Shanmugam; Aditya Tyagi Letters in Applied Microbiology 2022. doi:10.1093/lambio/ovac008

Other claims from this paper (5)

Method / resource PHI blast identified 26 potential pathogenicity genes.
Observation Eight potential genes were constitutively expressed in RIRS-K in minimal broth.
Observation Four candidate genes were induced in rice inoculated with RIRS-K.
Observation Candidate genes were more highly expressed in RIRS-K than RIRS-17.
Intervention effect Candidate genes were downregulated during infection of biocontrol-precolonized PB-1.

Associationobservedoriginal resultmeasured

Claim · model-written summary

UV9 mutant no longer produced (-)-terremutin.

Taxon: grapevineVitise4
Material: UV9 mutante5
Interactor: Neofusicoccum parvumNeofusicoccum parvume1pathogen
Outcome: (-)-terremutine5
Direction: no longer producede5

Verbatim

e1
“Two Neofusicoccumparvum isolates and a UV mutant were characterized for their phytotoxin production in vitro, their pathogenicity on grapevine, and their genome sequenced”
✓ located verbatim in the source · abstract, characters 0–170

e4
“The isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin and high amounts of (R)-mellein, but it was less aggressive on grapevine than Np-Bt67”
✓ located verbatim in the source · abstract, characters 386–542

e5
“The UV9 mutant obtained from Np-B (NpB-UV9) no longer produced (-)-terremutin but overproduced (R)-mellein by 2.5-fold, and it was as pathogenic as its parent”
✓ located verbatim in the source · abstract, characters 544–702

Title

Diversity of Neofusicoccum parvum for the Production of the Phytotoxic Metabolites (-)-Terremutin and (R)-Mellein

Patricia Trotel-Aziz; Guillaume Robert-Siegwald; Olivier Fernandez; et al. Journal of Fungi 2022. doi:10.3390/jof8030319

Other claims from this paper (12)

Associationobservedoriginal resultmeasured

Claim · model-written summary

UV9 mutant overproduced (R)-mellein by 2.5-fold.

Taxon: grapevineVitise4
Material: UV9 mutante5
Interactor: Neofusicoccum parvumNeofusicoccum parvume1pathogen
Outcome: (R)-melleine5
Direction: overproducede5
Value: 2.5-folde5

Verbatim

e1
“Two Neofusicoccumparvum isolates and a UV mutant were characterized for their phytotoxin production in vitro, their pathogenicity on grapevine, and their genome sequenced”
✓ located verbatim in the source · abstract, characters 0–170

e4
“The isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin and high amounts of (R)-mellein, but it was less aggressive on grapevine than Np-Bt67”
✓ located verbatim in the source · abstract, characters 386–542

e5
“The UV9 mutant obtained from Np-B (NpB-UV9) no longer produced (-)-terremutin but overproduced (R)-mellein by 2.5-fold, and it was as pathogenic as its parent”
✓ located verbatim in the source · abstract, characters 544–702

Title

Diversity of Neofusicoccum parvum for the Production of the Phytotoxic Metabolites (-)-Terremutin and (R)-Mellein

Patricia Trotel-Aziz; Guillaume Robert-Siegwald; Olivier Fernandez; et al. Journal of Fungi 2022. doi:10.3390/jof8030319

Other claims from this paper (12)

Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

UV9 mutant was as pathogenic on grapevine as its parent.

Taxon: grapevineVitise4
Material: UV9 mutante5
Interactor: Neofusicoccum parvumNeofusicoccum parvume1pathogen
Outcome: pathogenice5
Direction: as pathogenice5
Comparator: its parente5

Verbatim

e1
“Two Neofusicoccumparvum isolates and a UV mutant were characterized for their phytotoxin production in vitro, their pathogenicity on grapevine, and their genome sequenced”
✓ located verbatim in the source · abstract, characters 0–170

e4
“The isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin and high amounts of (R)-mellein, but it was less aggressive on grapevine than Np-Bt67”
✓ located verbatim in the source · abstract, characters 386–542

e5
“The UV9 mutant obtained from Np-B (NpB-UV9) no longer produced (-)-terremutin but overproduced (R)-mellein by 2.5-fold, and it was as pathogenic as its parent”
✓ located verbatim in the source · abstract, characters 544–702

Title

Diversity of Neofusicoccum parvum for the Production of the Phytotoxic Metabolites (-)-Terremutin and (R)-Mellein

Patricia Trotel-Aziz; Guillaume Robert-Siegwald; Olivier Fernandez; et al. Journal of Fungi 2022. doi:10.3390/jof8030319

Other claims from this paper (12)

Association Isolate Np-Bt67 produced a high level of (-)-terremutin and almost no (R)-mellein.
Association Isolate Np-Bt67 was the most aggressive on grapevine, triggering apoplexy.
Intervention effect Purified (-)-terremutin did not induce similar symptoms on grapevine.
Association Isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin than Np-Bt67.
Association Isolate Bourgogne S-116 (Np-B) produced high amounts of (R)-mellein.
Association Isolate Bourgogne S-116 (Np-B) was less aggressive on grapevine than Np-Bt67.
Association UV9 mutant no longer produced (-)-terremutin.
Association UV9 mutant overproduced (R)-mellein by 2.5-fold.
Observation NpB-UV9 differed from its parent by simple mutations in two genes, one of them the transcription factor UCR-NP2_6692.
Association Challenge with N. parvum or purified phytotoxins upregulated SA-dependent defenses in grapevine.
Association (-)-terremutin interfered with JA/ET-dependent defenses of grapevine.
Observation An isolate or mutant not producing these toxins in vitro is still pathogenic on grapevine.

Observationobservedoriginal resultmeasured

Claim · model-written summary

NpB-UV9 differed from its parent by simple mutations in two genes, one of them the transcription factor UCR-NP2_6692.

Taxon: grapevineVitise4
Material: NpB-UV9e6
Interactor: Neofusicoccum parvumNeofusicoccum parvume1pathogen
Gene: UCR-NP2_6692e6
Outcome: simple mutations in two genese6

Verbatim

e1
“Two Neofusicoccumparvum isolates and a UV mutant were characterized for their phytotoxin production in vitro, their pathogenicity on grapevine, and their genome sequenced”
✓ located verbatim in the source · abstract, characters 0–170

e4
“The isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin and high amounts of (R)-mellein, but it was less aggressive on grapevine than Np-Bt67”
✓ located verbatim in the source · abstract, characters 386–542

e6
“NpB-UV9 differed from its parent by simple mutations in two genes (transcription factor UCR-NP2_6692, regulatory protein UCR-NP2_9007)”
✓ located verbatim in the source · abstract, characters 704–838

Title

Diversity of Neofusicoccum parvum for the Production of the Phytotoxic Metabolites (-)-Terremutin and (R)-Mellein

Patricia Trotel-Aziz; Guillaume Robert-Siegwald; Olivier Fernandez; et al. Journal of Fungi 2022. doi:10.3390/jof8030319

Other claims from this paper (12)

Association Isolate Np-Bt67 produced a high level of (-)-terremutin and almost no (R)-mellein.
Association Isolate Np-Bt67 was the most aggressive on grapevine, triggering apoplexy.
Intervention effect Purified (-)-terremutin did not induce similar symptoms on grapevine.
Association Isolate Bourgogne S-116 (Np-B) produced 3-fold less (-)-terremutin than Np-Bt67.
Association Isolate Bourgogne S-116 (Np-B) produced high amounts of (R)-mellein.
Association Isolate Bourgogne S-116 (Np-B) was less aggressive on grapevine than Np-Bt67.
Association UV9 mutant no longer produced (-)-terremutin.
Association UV9 mutant overproduced (R)-mellein by 2.5-fold.
Association UV9 mutant was as pathogenic on grapevine as its parent.
Association Challenge with N. parvum or purified phytotoxins upregulated SA-dependent defenses in grapevine.
Association (-)-terremutin interfered with JA/ET-dependent defenses of grapevine.
Observation An isolate or mutant not producing these toxins in vitro is still pathogenic on grapevine.

“aggressive isolates”

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