Oryza sativa 577,275 claims

species · family Poaceae · green plant · NCBI Taxonomy ↗

Common name: rice — Also written in claims: rice · upland rice · rice plants · hybrid rice · japonica rice · rice plant

Listed here with its subspecies, varieties and cultivar groups: Oryza sativa Japonica Group (5,865 claims), Oryza sativa Indica Group (3,837 claims), Oryza sativa f. spontanea (46 claims)

1687 spellings

Questions studied on this organism5,183 questions240 with results that differ25,631 papers

Oryza sativa · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

577,275 claims

Open in search (filters, sorting) →

Observationobservedoriginal resultmeasured

Claim · model-written summary

OsGRX9 knockdown affected expression of iron-related genes.

Taxon: riceOryza sativat0
Material: OsGRX9 and OsGRX6 knockdown linese0
Gene: OsGRX9e0
Outcome: Expression of iron-related genese0

Not reportedDirection

Verbatim

t0
“rice”
✓ located verbatim in the source · title, characters 106–110

e0
“Expression of iron-related genes was affected in the OsGRX9 and OsGRX6 knockdown lines”
✓ located verbatim in the source · abstract, characters 1180–1266

Title

The basic leucine zipper transcription factor OsbZIP83 and the glutaredoxins OsGRX6 and OsGRX9 facilitate rice iron utilization under the control of OsHRZ ubiquitin ligases

KOBAYASHI,Takanori; SHINKAWA,Haruka; NAGANO,Atsushi J; et al. Institutional Repositories DataBase (IRDB)

Other claims from this paper (14)

Observation Iron deficiency or OsHRZ knockdown produced differential regulation between transcript and protein levels for many genes, including OsbZIP83.
Observation OsGRX6 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX9 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX6 interacted with OsbZIP83.
Observation In vitro assays suggested OsbZIP83 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX6 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX9 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation OsbZIP83 protein was preferentially degraded in iron-deficient rice roots.
Intervention effect OsGRX9 overexpression improved rice tolerance to iron deficiency.
Intervention effect OsbZIP83 overexpression improved rice tolerance to iron deficiency.
Observation OsGRX6 knockdown affected expression of iron-related genes.
Intervention effect OsbZIP83 overexpression enhanced expression of OsYSL2 and OsNAS3.
Intervention effect OsbZIP83 overexpression enhanced expression of OsGRX9 and genes related to phytoalexin biosynthesis and the salicylic acid pathway.
Mechanism The authors infer that OsbZIP83, OsGRX6 and OsGRX9 facilitate iron utilization downstream of OsHRZ.

Observationobservedoriginal resultmeasured

Claim · model-written summary

OsGRX6 knockdown affected expression of iron-related genes.

Taxon: riceOryza sativat0
Material: OsGRX9 and OsGRX6 knockdown linese0
Gene: OsGRX6e0
Outcome: Expression of iron-related genese0

Not reportedDirection

Verbatim

t0
“rice”
✓ located verbatim in the source · title, characters 106–110

e0
“Expression of iron-related genes was affected in the OsGRX9 and OsGRX6 knockdown lines”
✓ located verbatim in the source · abstract, characters 1180–1266

Title

The basic leucine zipper transcription factor OsbZIP83 and the glutaredoxins OsGRX6 and OsGRX9 facilitate rice iron utilization under the control of OsHRZ ubiquitin ligases

KOBAYASHI,Takanori; SHINKAWA,Haruka; NAGANO,Atsushi J; et al. Institutional Repositories DataBase (IRDB)

Other claims from this paper (14)

Observation Iron deficiency or OsHRZ knockdown produced differential regulation between transcript and protein levels for many genes, including OsbZIP83.
Observation OsGRX6 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX9 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX6 interacted with OsbZIP83.
Observation In vitro assays suggested OsbZIP83 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX6 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX9 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation OsbZIP83 protein was preferentially degraded in iron-deficient rice roots.
Intervention effect OsGRX9 overexpression improved rice tolerance to iron deficiency.
Intervention effect OsbZIP83 overexpression improved rice tolerance to iron deficiency.
Observation OsGRX9 knockdown affected expression of iron-related genes.
Intervention effect OsbZIP83 overexpression enhanced expression of OsYSL2 and OsNAS3.
Intervention effect OsbZIP83 overexpression enhanced expression of OsGRX9 and genes related to phytoalexin biosynthesis and the salicylic acid pathway.
Mechanism The authors infer that OsbZIP83, OsGRX6 and OsGRX9 facilitate iron utilization downstream of OsHRZ.

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

OsbZIP83 overexpression enhanced expression of OsYSL2 and OsNAS3.

Taxon: riceOryza sativat0
Treatment: OsbZIP83 overexpressione0
Gene: OsYSL2 and OsNAS3e0
Outcome: expression of OsYSL2 and OsNAS3e0
Direction: enhancede0

Not reportedComparator

Verbatim

t0
“rice”
✓ located verbatim in the source · title, characters 106–110

e0
“OsbZIP83 overexpression lines showed enhanced expression of OsYSL2 and OsNAS3”
✓ located verbatim in the source · abstract, characters 1320–1397

Title

The basic leucine zipper transcription factor OsbZIP83 and the glutaredoxins OsGRX6 and OsGRX9 facilitate rice iron utilization under the control of OsHRZ ubiquitin ligases

KOBAYASHI,Takanori; SHINKAWA,Haruka; NAGANO,Atsushi J; et al. Institutional Repositories DataBase (IRDB)

Other claims from this paper (14)

Observation Iron deficiency or OsHRZ knockdown produced differential regulation between transcript and protein levels for many genes, including OsbZIP83.
Observation OsGRX6 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX9 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX6 interacted with OsbZIP83.
Observation In vitro assays suggested OsbZIP83 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX6 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX9 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation OsbZIP83 protein was preferentially degraded in iron-deficient rice roots.
Intervention effect OsGRX9 overexpression improved rice tolerance to iron deficiency.
Intervention effect OsbZIP83 overexpression improved rice tolerance to iron deficiency.
Observation OsGRX9 knockdown affected expression of iron-related genes.
Observation OsGRX6 knockdown affected expression of iron-related genes.
Intervention effect OsbZIP83 overexpression enhanced expression of OsGRX9 and genes related to phytoalexin biosynthesis and the salicylic acid pathway.
Mechanism The authors infer that OsbZIP83, OsGRX6 and OsGRX9 facilitate iron utilization downstream of OsHRZ.

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

OsbZIP83 overexpression enhanced expression of OsGRX9 and genes related to phytoalexin biosynthesis and the salicylic acid pathway.

Taxon: riceOryza sativat0
Treatment: OsbZIP83 overexpressione0
Gene: OsGRX9e0
Outcome: OsGRX9 and genes related to phytoalexin biosynthesis and the salicylic acid pathwaye0
Direction: enhancede0

Not reportedComparator

Verbatim

t0
“rice”
✓ located verbatim in the source · title, characters 106–110

e0
“OsbZIP83 overexpression lines showed enhanced expression of OsYSL2 and OsNAS3,which are involved in internal iron translocation, in addition to OsGRX9 and genes related to phytoalexin biosynthesis and the salicylic acid pathway”
✓ located verbatim in the source · abstract, characters 1320–1547

Title

The basic leucine zipper transcription factor OsbZIP83 and the glutaredoxins OsGRX6 and OsGRX9 facilitate rice iron utilization under the control of OsHRZ ubiquitin ligases

KOBAYASHI,Takanori; SHINKAWA,Haruka; NAGANO,Atsushi J; et al. Institutional Repositories DataBase (IRDB)

Other claims from this paper (14)

Observation Iron deficiency or OsHRZ knockdown produced differential regulation between transcript and protein levels for many genes, including OsbZIP83.
Observation OsGRX6 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX9 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX6 interacted with OsbZIP83.
Observation In vitro assays suggested OsbZIP83 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX6 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX9 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation OsbZIP83 protein was preferentially degraded in iron-deficient rice roots.
Intervention effect OsGRX9 overexpression improved rice tolerance to iron deficiency.
Intervention effect OsbZIP83 overexpression improved rice tolerance to iron deficiency.
Observation OsGRX9 knockdown affected expression of iron-related genes.
Observation OsGRX6 knockdown affected expression of iron-related genes.
Intervention effect OsbZIP83 overexpression enhanced expression of OsYSL2 and OsNAS3.
Mechanism The authors infer that OsbZIP83, OsGRX6 and OsGRX9 facilitate iron utilization downstream of OsHRZ.

Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer that OsbZIP83, OsGRX6 and OsGRX9 facilitate iron utilization downstream of OsHRZ.

Taxon: riceOryza sativat0
Gene: OsbZIP83,OsGRX6,and OsGRX9e0
Outcome: iron utilizatione0
Qualifier: downstream of the OsHRZ pathwaye0

Verbatim

t0
“rice”
✓ located verbatim in the source · title, characters 106–110

e0
“OsbZIP83,OsGRX6,and OsGRX9 facilitate iron utilization downstream of the OsHRZ pathway”
✓ located verbatim in the source · abstract, characters 1574–1660

Title

The basic leucine zipper transcription factor OsbZIP83 and the glutaredoxins OsGRX6 and OsGRX9 facilitate rice iron utilization under the control of OsHRZ ubiquitin ligases

KOBAYASHI,Takanori; SHINKAWA,Haruka; NAGANO,Atsushi J; et al. Institutional Repositories DataBase (IRDB)

Other claims from this paper (14)

Observation Iron deficiency or OsHRZ knockdown produced differential regulation between transcript and protein levels for many genes, including OsbZIP83.
Observation OsGRX6 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX9 interacted with OsHRZ proteins in yeast and plant cells.
Observation OsGRX6 interacted with OsbZIP83.
Observation In vitro assays suggested OsbZIP83 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX6 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation In vitro assays suggested OsGRX9 undergoes 26S proteasome- and OsHRZ-dependent degradation.
Observation OsbZIP83 protein was preferentially degraded in iron-deficient rice roots.
Intervention effect OsGRX9 overexpression improved rice tolerance to iron deficiency.
Intervention effect OsbZIP83 overexpression improved rice tolerance to iron deficiency.
Observation OsGRX9 knockdown affected expression of iron-related genes.
Observation OsGRX6 knockdown affected expression of iron-related genes.
Intervention effect OsbZIP83 overexpression enhanced expression of OsYSL2 and OsNAS3.
Intervention effect OsbZIP83 overexpression enhanced expression of OsGRX9 and genes related to phytoalexin biosynthesis and the salicylic acid pathway.