Paper · 2020 · Frontiers in Plant Science

Genome-Wide Characterization of the C-repeat Binding Factor (CBF) Gene Family Involved in the Response to Abiotic Stresses in Tea Plant (Camellia sinensis)

Zhe Hu; Qiuyan Ban; Jing Hao; et al.

8
claims
13
verbatim quotes
87
citations
3
research areas
✓
Open access · cc-by

Abstract

C-repeat (CRT)/dehydration responsive element (DRE)-binding factor CBFs, a small family of genes encoding transcriptional activators, play important roles in plant cold tolerance. In this study, a comprehensive genome-wide analysis was carried out to identify and characterize the functional dynamics of CsCBFs in tea plant (Camellia sinensis). A total of 6 CBF genes were obtained from the tea plant genome and named CBF1-6. All of the CsCBFs had an AP2/ERF DNA-binding domain and nuclear localization signal (NLS) sequence. CsCBF-eGFP fusion and DAPI staining analysis confirmed the nuclear localization of the CsCBFs. Transactivation assays showed that the CsCBFs, except CsCBF1, had transcriptional activity. CsCBF expression was differentially induced by cold, heat, PEG, salinity, ABA, GA, MeJA and SA stresses. In particular, the CsCBF genes were significantly induced by cold treatments. To further characterize the functions of CsCBF genes, we overexpressed the CsCBF3 gene in Arabidopsis thaliana plants. The resulting transgenic plants showed increased cold tolerance compared with the wild-type Arabidopsis plant. The enhanced cold tolerance of the transgenic plants was potentially achieved through an ABA-independent pathway. This study will help to increase our understanding of CsCBF genes and their contributions to stress tolerance in tea plants.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Six CBF genes were identified in the tea genome.

Taxon
tea plante0
Gene
CBF genese0
Outcome
6 CBF genese0
Value
6 CBF genese0

Verbatim

e0

“A total of 6 CBF genes were obtained from the tea plant genome and named CBF1-6.”

✓ located verbatim in the source · abstract, characters 345–425 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

All CsCBFs have an AP2/ERF DNA-binding domain and NLS sequence.

Taxon
tea plantt0
Gene
CsCBFse0
Outcome
AP2/ERF DNA-binding domain and nuclear localization signal (NLS) sequencee0

Verbatim

e0

“All of the CsCBFs had an AP2/ERF DNA-binding domain and nuclear localization signal (NLS) sequence.”

✓ located verbatim in the source · abstract, characters 426–525 · show in text ↑
t0

“tea plant (Camellia sinensis)”

✓ located after whitespace/quote normalisation · title, characters 126–155 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

CsCBFs localized to nuclei.

Taxon
tea plantt0
Gene
CsCBFse0
Outcome
nuclear localizatione0

Verbatim

e0

“CsCBF-eGFP fusion and DAPI staining analysis confirmed the nuclear localization of the CsCBFs.”

✓ located verbatim in the source · abstract, characters 526–620 · show in text ↑
t0

“tea plant (Camellia sinensis)”

✓ located after whitespace/quote normalisation · title, characters 126–155 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

CsCBFs except CsCBF1 showed transcriptional activity.

Taxon
tea plantt0
Gene
CsCBFse0
Outcome
transcriptional activitye0
Qualifier
except CsCBF1e0

Verbatim

e0

“Transactivation assays showed that the CsCBFs, except CsCBF1, had transcriptional activity.”

✓ located verbatim in the source · abstract, characters 621–712 · show in text ↑
t0

“tea plant (Camellia sinensis)”

✓ located after whitespace/quote normalisation · title, characters 126–155 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

CsCBF expression responded differently to multiple abiotic stresses and hormones.

Taxon
tea plantt0
Treatment
cold, heat, PEG, salinity, ABA, GA, MeJA and SA stressese0
Gene
CsCBFe0
Outcome
CsCBF expressione0
Direction
differentially inducede0

Not reportedComparator

Verbatim

e0

“CsCBF expression was differentially induced by cold, heat, PEG, salinity, ABA, GA, MeJA and SA stresses.”

✓ located verbatim in the source · abstract, characters 713–817 · show in text ↑
t0

“tea plant (Camellia sinensis)”

✓ located after whitespace/quote normalisation · title, characters 126–155 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Cold significantly induced CsCBF genes.

Taxon
tea plantt0
Treatment
cold treatmentse0
Gene
CsCBF genese0
Outcome
CsCBF genese0
Direction
inducede0

Not reportedComparator

Verbatim

e0

“the CsCBF genes were significantly induced by cold treatments”

✓ located verbatim in the source · abstract, characters 833–894 · show in text ↑
t0

“tea plant (Camellia sinensis)”

✓ located after whitespace/quote normalisation · title, characters 126–155 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

CsCBF3 overexpression increased cold tolerance in Arabidopsis compared with wild type.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
overexpressed the CsCBF3 genee0
Gene
CsCBF3e0
Outcome
cold tolerancee0
Direction
increasede0
Comparator
wild-type Arabidopsis plante0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“we overexpressed the CsCBF3 gene in Arabidopsis thaliana plants. The resulting transgenic plants showed increased cold tolerance compared with the wild-type Arabidopsis plant.”

✓ located verbatim in the source · abstract, characters 950–1125 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Enhanced cold tolerance may act through an ABA-independent pathway.

Taxon
ArabidopsisArabidopsise0
Outcome
enhanced cold tolerancee0
Qualifier
ABA-independent pathwaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis plant. The enhanced cold tolerance of the transgenic plants was potentially achieved through an ABA-independent pathway.”

✓ located verbatim in the source · abstract, characters 1107–1239 · show in text ↑

(-)-methyl jasmonate · molecular: expression · Camellia sinensis (black tea)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

1 paper more in this group

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(+)-abscisic acid · molecular: expression · Camellia sinensis (black tea)Positive and negative results

7 papers: 4 positive, 3 negative or no effect

3 papers in the same direction as this paper · 3 in the opposite direction

  1. negative
  2. no effect
  3. negative

3 papers more in this group

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salicylic acid · molecular: expression · Camellia sinensis (black tea)Results agree

4 papers: 4 positive, 0 negative or no effect

3 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive
See all 4 papers →

drought · molecular: expression · Camellia sinensis (black tea)Results agree

6 papers: 6 positive, 0 negative or no effect

5 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

2 papers more in this group

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cold · molecular: expression · Camellia sinensis (black tea)Results agree

10 papers: 10 positive, 0 negative or no effect

9 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

6 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.