Paper · 2024 · Frontiers in Microbiology

The effects of chemical fungicides and salicylic acid on the apple microbiome and fungal disease incidence under changing environmental conditions

Michael S. McLaughlin; Svetlana N. Yurgel; Pervaiz A. Abbasi; et al.

4
claims
9
verbatim quotes
18
citations
3
research areas
✓
Open access · cc-by

Abstract

Epiphytic and endophytic micro-organisms associated with plants form complex communities on or in their host plant. These communities influence physiological traits, development, and host susceptibility to abiotic and biotic stresses, and these communities are theorized to have evolved alongside their hosts, forming a unit of selection known as the holobiont. The microbiome is highly variable and can be influenced by abiotic factors, including applied exogenous agents. In this study, we compared the impact of chemical fungicide and salicylic acid treatments on the fungal communities of "Honeycrisp" apples at harvest over two consecutive growing years. We demonstrated variations in fungal community structure and composition by tissue type, growing season, and treatment regimes and that fungicide treatments were associated with reduced network complexity. Finally, we show that the inclusion of salicylic acid with 50% less chemical fungicides in an integrated spray program allowed a reduction in fungicide use while maintaining effective control of disease at harvest and following storage.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 4

Observationobservedoriginal resultmeasured

Claim · model-written summary

Apple fungal community structure and composition varied by tissue type, season and treatment regime

Material
Honeycrispe1
Outcome
fungal community structure and compositione2
Qualifier
by tissue type, growing season, and treatment regimese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“on the apple microbiome”

✓ located verbatim in the source · title, characters 54–77 · show in text ↑
e1

“fungal communities of "Honeycrisp" apples at harvest”

✓ located verbatim in the source · abstract, characters 571–623 · show in text ↑
e2

“We demonstrated variations in fungal community structure and composition by tissue type, growing season, and treatment regimes”

✓ located verbatim in the source · abstract, characters 660–786 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Fungicide treatments were associated with reduced apple fungal network complexity

Treatment
fungicide treatmentse3
Outcome
network complexitye3
Direction
reducede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“on the apple microbiome”

✓ located verbatim in the source · title, characters 54–77 · show in text ↑
e3

“fungicide treatments were associated with reduced network complexity”

✓ located verbatim in the source · abstract, characters 796–864 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Salicylic acid with 50% less chemical fungicide allowed a reduction in fungicide use in apple

Treatment
the inclusion of salicylic acid with 50% less chemical fungicides in an integrated spray programe4
Outcome
fungicide usee4
Direction
reductione4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“on the apple microbiome”

✓ located verbatim in the source · title, characters 54–77 · show in text ↑
e4

“the inclusion of salicylic acid with 50% less chemical fungicides in an integrated spray program allowed a reduction in fungicide use while maintaining effective control of disease at harvest and following storage”

✓ located verbatim in the source · abstract, characters 888–1101 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Salicylic acid with 50% less chemical fungicide maintained effective apple disease control at harvest and after storage

Treatment
the inclusion of salicylic acid with 50% less chemical fungicides in an integrated spray programe4
Outcome
effective control of disease at harvest and following storagee4
Direction
maintaininge4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“on the apple microbiome”

✓ located verbatim in the source · title, characters 54–77 · show in text ↑
e4

“the inclusion of salicylic acid with 50% less chemical fungicides in an integrated spray program allowed a reduction in fungicide use while maintaining effective control of disease at harvest and following storage”

✓ located verbatim in the source · abstract, characters 888–1101 · show in text ↑

salicylic acid · molecular: metabolites · Malus domestica (apple)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

fungicide · molecular: metabolites · Malus domestica (apple)Positive and negative results

8 papers: 3 positive, 5 negative or no effect

2 papers in the same direction as this paper · 5 in the opposite direction

  1. no effect
  2. negative
  3. no effect

4 papers more in this group

See all 8 papers →

application · control · Malus domestica (apple)Positive and negative results

29 papers: 25 positive, 4 negative or no effect

24 papers in the same direction as this paper · 2 in the opposite direction · 2 reporting no difference from an alternative

  1. no effect
  2. no effect
  3. no effect

25 papers more in this group

See all 29 papers →

application · molecular: metabolites · Malus domestica (apple)Positive and negative results

61 papers: 47 positive, 14 negative or no effect

46 papers in the same direction as this paper · 13 in the opposite direction · 1 reporting no difference from an alternative

  1. no effect
  2. negative
  3. no effect

57 papers more in this group

See all 61 papers →

fungicide · control · Malus domestica (apple)Results agree

13 papers: 13 positive, 0 negative or no effect

12 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

9 papers more in this group

See all 13 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.