Search claims · PlantClaims

Associationobservedoriginal resultmeasured

Claim · model-written summary

Polyphenol changes aligned with changes in gene expression.

Taxon: kiwifruitActinidia deliciosat0
Outcome: changes in gene expressione0
Qualifier: aligned withe0

Not reportedOrgan / stageDirection

Verbatim

e0
“which aligned with observed changes in gene expression”
✓ located verbatim in the source · abstract, characters 1616–1670

t0
“kiwifruit”
✓ located verbatim in the source · title, characters 49–58

Title

Uncovering the hidden dynamics of pollination in kiwifruit maturity and ripening

Marios Georgios Kollaros; Michail Michailidis; Alexandra Poulouktsi; et al. Postharvest Biology and Technology 2025. doi:10.1016/j.postharvbio.2025.113763

Other claims from this paper (12)

Intervention effect Artificial pollination increased fruit set and seed number.
Intervention effect Artificial pollination increased fruit size and weight at harvest relative to open-field pollination.
Observation Artificially pollinated fruit redirected carbon from sugar synthesis toward organic acid production.
Intervention effect Artificial pollination altered plant growth regulator dynamics.
Intervention effect Artificial pollination induced extensive stress-associated responses.
Intervention effect Artificial pollination accelerated ripening.
Intervention effect Artificial pollination increased ethylene production.
Intervention effect Artificial pollination accelerated fruit softening.
Observation Genes and proteins involved in ethylene signaling and cell wall structure changed expression.
Intervention effect Artificial pollination reduced key esters.
Intervention effect Artificial pollination increased aldehydes.
Intervention effect Artificial pollination reduced catechin, epicatechin and procyanidin B2 levels.

Associationobservedoriginal resultmeasured

Claim · model-written summary

ROS content changes during seed imbibition were related to expression pattern changes.

Organ / stage: seede0
Outcome: changes in expression patterne0

Not reportedTaxonDirection

Verbatim

e0
“changes in ROS content during seed imbibition are also related to changes in expression pattern”
✓ located verbatim in the source · abstract, characters 716–811

Title

ROS Signaling in Seed Dormancy Alleviation

Hayat El-Maarouf Bouteau; Claudette Job; Dominique Job; et al. Plant Signaling & Behavior 2007. doi:10.4161/psb.2.5.4460

Other claims from this paper (4)

Associationobservedoriginal resultmeasured

Claim · model-written summary

Changes in amino acid pools correlated with gene expression changes.

Taxon: poplarPopulust0
Gene: these genese0
Outcome: changes in expression profilese0

Not reportedDirection

Verbatim

e0
“which were correlated with the observed changes in expression profiles for these genes”
✓ located verbatim in the source · abstract, characters 687–773

t0
“poplar”
✓ located verbatim in the source · title, characters 75–81

Title

Gene expression associated with N‐induced shifts in resource allocation in poplar

J. E. K. COOKE; K. A. BROWN; R. WU; et al. Plant Cell & Environment 2003. doi:10.1046/j.1365-3040.2003.01012.x

Other claims from this paper (4)

Intervention effect Nitrogen fertilization regulated 52 partial cDNA clones.
Intervention effect Stem girdling shifted expression of some nitrogen-responsive cDNAs.
Intervention effect Girdling changed glutamine and asparagine pools.
Mechanism Expression data suggested nitrogen availability modulates carbon and nitrogen resource partitioning.

Observationobservedoriginal resultmeasured

Claim · model-written summary

SOD expression changes were consistent with ROS accumulation changes.

Taxon: tomatoSolanum lycopersicumt0
Gene: SODse0
Outcome: expression of SODse0

Verbatim

e0
“The changes in the expression of SODs were consistent with the accumulations of ROS”
✓ located verbatim in the source · abstract, characters 1153–1236

t0
“tomato”
✓ located verbatim in the source · title, characters 45–51

Title

Functional analyses of lipocalin proteins in tomato

Anung Wahyudi; Dinni Ariyani; Gang Ma; et al. Plant Biotechnology 2018. doi:10.5511/plantbiotechnology.18.0620a

Other claims from this paper (11)

Observation SlTIL1 coding sequence was 558 bp.
Observation SlTIL2 coding sequence was 558 bp.
Observation SlCHL coding sequence was 1002 bp.
Observation TargetP predicted no characteristic transit peptides for SlTIL1 or SlTIL2.
Observation TargetP predicted a chloroplastic transit peptide in SlCHL.
Observation SlTIL1 and SlTIL2 proteins localized mainly to the plasma membrane.
Observation SlCHL localized to chloroplasts.
Intervention effect Overexpression or silencing of the three lipocalins significantly affected tomato phenotypes.
Intervention effect Lipocalin overexpression was associated with low ROS levels.
Intervention effect Lipocalin silencing was associated with high ROS levels.
Observation The authors suggested that SlTIL1 and SlTIL2 protect membranes from ROS.

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Summer temperature and photoperiod changes trigger changes in gene expression.

Taxon: Moricandia arvensisMoricandia arvensise1
Outcome: changes in gene expressione0
Qualifier: Changes in temperature and photoperiod in summere0

Verbatim

e0
“Changes in temperature and photoperiod in summer trigger changes in gene expression”
✓ located verbatim in the source · abstract, characters 542–625

e1
“Moricandia arvensis flowers”
✓ located verbatim in the source · abstract, characters 209–236

Title

Within-individual phenotypic plasticity in flowers fosters pollination niche shift

José M. Gómez; Francisco Perfectti; Cristina Armas; et al. Nature Communications 2020. doi:10.1038/s41467-020-17875-1

Other claims from this paper (5)

Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Gene expression changes appear important to drought-related flowering-time changes.

Taxon: tropical maizet0
Treatment: droughte0
Gene: gene expressione0
Outcome: changes in flowering timee0

Verbatim

e0
“Changes in gene expression appear to play an important role in changes in flowering time under drought”
✓ located verbatim in the source · abstract, characters 943–1045

t0
“tropical maize”
✓ located after whitespace/quote normalisation · title, characters 103–117

Title

RNA-Seq Analysis of Gene Expression Changes Related to Delay of Flowering Time under Drought Stress in Tropical Maize

Kyung-Hee Kim; Kitae Song; Jeong-Min Park; et al. Applied Sciences 2021. doi:10.3390/app11094273

Other claims from this paper (2)

Observation Flowering-time genes including ID1, Hd3a, CONSTANS-like genes and ZCN8 changed expression.
Intervention effect Drought downregulated Hd3a, CONZ1 and ZCN8.

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt exposure caused quantitative changes in Prosopis farcta root gene expression.

Taxon: Prosopis farctaProsopis farctat0
Treatment: salte0
Outcome: quantitative changes of gene expressione0
Direction: changese0

Not reportedComparator

Verbatim

e0
“Qualitative as well as quantitative changes of gene expression as induced by salt could be observed”
✓ located verbatim in the source · abstract, characters 1074–1173

t0
“Prosopis farcta”
✓ located verbatim in the source · title, characters 32–47

Title

Salt induced gene expression in Prosopis farcta

I.M. Heimer; A. Golan; Herman Lips Plant Physiol., Suppl.; (United States) 1987

Other claims from this paper (1)

Intervention effect Salt exposure caused qualitative changes in Prosopis farcta root gene expression.

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

The metabolic changes were not due to changes in gene expression.

Taxon: Arabidopsis thalianaArabidopsis thalianae1
Gene: AmGSTF1e2
Outcome: changes in biochemistrye0
Qualifier: not due to changes in gene expressione0

Verbatim

e0
“these changes in biochemistry were not due to changes in gene expression”
✓ located verbatim in the source · abstract, characters 1042–1114

e1
“Arabidopsis thaliana”
✓ located verbatim in the source · abstract, characters 791–811

e2
“black-grass A. myosuroides (Am) AmGSTF1”
✓ located verbatim in the source · abstract, characters 734–773

Title

Key role for a glutathione transferase in multiple-herbicide resistance in grass weeds

Ian Cummins; David J. Wortley; Federico Sabbadin; et al. Proceedings of the National Academy of Sciences 2013. doi:10.1073/pnas.1221179110

Other claims from this paper (8)

Association MHR in annual rye-grass was associated with increased GSTF1 expression.
Association MHR in black-grass was associated with increased GSTF1 expression.
Observation GSTF1 had restricted herbicide detoxification ability.
Intervention effect Arabidopsis expressing black-grass AmGSTF1 acquired resistance to multiple herbicides.
Observation Arabidopsis expressing AmGSTF1 showed metabolic changes similar to resistant weeds.
Mechanism AmGSTF1 directly regulated metabolism, leading to protective flavonoid accumulation.
Observation 4-chloro-7-nitro-benzoxadiazole was active against black-grass AmGSTF1.
Intervention effect 4-chloro-7-nitro-benzoxadiazole helped restore herbicide control in resistant black-grass.

Associationobservedoriginal resultmeasured

Claim · model-written summary

Changes in enzyme fraction activity were linked with enzyme expression changes.

Taxon: wheat and barleyHordeum vulgare Triticum aestivumt0
Gene: enzyme expression changese0
Outcome: Activity redistributione0
Direction: linkede0

Verbatim

e0
“Activity redistribution between separate fractions of enzyme spectra were linked with enzyme expression changes.”
✓ located verbatim in the source · abstract, characters 307–419

t0
“Cultivation of wheat and barley plants under temperature stress fluctuations”
✓ located verbatim in the source · abstract, characters 0–76

Title

[Oxidoreductase expression and protein storage in winter and spring cereals under extremal temperature condition].

V A Toptikov; L F D'iachenko; V N Totskiĭ PubMed 2012

Other claims from this paper (8)

Intervention effect Temperature fluctuations reduced acid protein storage in wheat and barley tissues by more than 25%.
Intervention effect Temperature fluctuations reduced peroxidase and superoxide dismutase activities.
Observation Common phenoloxidase activity did not change.
Intervention effect Extreme temperature altered peroxidase/oxidase ratios in enzyme fractions.
Observation Seedling peroxidase/superoxide reductase fraction ratios did not change.
Association Vrn1 locus effects on oxidoreductase expression depended on organism–environment context.
Association In normal growth conditions development type was uncorrelated with oxidoreductase spectrum characteristics.
Association Changes in enzyme isoforms during stress response differed between spring and winter genotypes and depended on Vrn1 alleles.

Associationobservedoriginal resultmeasured

Claim · model-written summary

TaHAT expression responded to temperature changes.

Taxon: Triticum aestivumTriticum aestivumt0
Treatment: temperature changese0
Outcome: TaHATs in expressione0

Not reportedDirection

Verbatim

t0
“Triticum aestivum”
✓ located verbatim in the source · title, characters 75–92

e0
“The TaHATs in expression also responded to temperature changes”
✓ located verbatim in the source · abstract, characters 1105–1167

Title

Genome-wide identification of the histone acetyltransferase gene family in Triticum aestivum

Shiqi Gao; Linzhi Li; Xiaolei Han; et al. BMC Genomics 2021. doi:10.1186/s12864-020-07348-6

Other claims from this paper (7)

Method / resource Thirty-one TaHAT genes were identified in six groups with conserved structures and motifs.
Method / resource Phylogenetic analysis predicted similarities among HAT genes in three plant species.
Association TaHATs appeared regulated by LTR and TC-rich repeats.
Observation TaHATs were differentially expressed across tissues.
Intervention effect TaHAT expression was significantly upregulated after barley streak mosaic virus infection.
Intervention effect TaHAT expression was significantly upregulated after Chinese wheat mosaic virus infection.
Intervention effect TaHAT expression was significantly upregulated after wheat yellow mosaic virus infection.

“expression changes”

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