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Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

P. mediterranea pretreatment reduced lemon leaf transcriptome changes.

Treatment
P. mediterranea pretreatmente1
Interactor
P. mediterraneaPseudomonas mediterraneae1biocontrol_agent
Outcome
lemon leaf transcriptome modificationse1
Direction
strongly reducede1

Not reportedComparator

Verbatim

e0

“lemon [Citrus limon (L.) Burm. f.]”

✓ located verbatim in the source · abstract, characters 276–310
e1

“P. mediterranea pretreatment strongly reduced lemon leaf transcriptome modifications”

✓ located verbatim in the source · abstract, characters 511–595

Title

Transcriptome analysis of lemon leaves ( Citrus limon ) infected by Plenodomus tracheiphilus reveals the effectiveness of Pseudomonas mediterranea in priming the plant response to mal secco disease

Angelo Sicilia; Vittoria Catara; Giulio Dimaria; et al. Journal of Plant Interactions 2023. doi:10.1080/17429145.2023.2243097

Other claims from this paper (4)
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Senescing leaves had more coordinated temporal transcriptome changes than growing leaves.

Organ / stage
senescing leavese0
Outcome
temporal changes in transcriptomese0
Direction
more coordinatede0
Comparator
growing leavese0

Not reportedTaxon

Verbatim

e0

“senescing leaves showed more coordinated temporal changes in transcriptomes than growing leaves”

✓ located verbatim in the source · abstract, characters 483–578

Title

Programming of Plant Leaf Senescence with Temporal and Inter-Organellar Coordination of Transcriptome in Arabidopsis1 

Hye Ryun Woo; Hee Jung Koo; Jeongsik Kim; et al. PLANT PHYSIOLOGY 2016. doi:10.1104/pp.15.01929

Other claims from this paper (3)
Method / resourceobservedoriginal resultpositivebasis n/a

Claim · model-written summary

The study provides systems-wide leaf transcriptome, proteome and metabolite datasets after illumination.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Organ / stage
leavest0
Outcome
systems-wide datasetse0

Not reportedComparatorValue

Verbatim

e0

“This study provides systems-wide datasets which allow plant researchers to examine the changes in leaf transcriptomes, proteomes and key metabolites upon illumination”

✓ located verbatim in the source · abstract, characters 1245–1411
t0

“Arabidopsis thaliana leaves”

✓ located verbatim in the source · title, characters 51–78

Title

Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination

Chao Liang; Shifeng Cheng; Youjun Zhang; et al. BMC Plant Biology 2016. doi:10.1186/s12870-016-0726-3

Other claims from this paper (7)
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Far-red light increased leaf area.

Treatment
Far-Red-Lightt0
Outcome
leaf areae0

Not reportedComparatorDirection

Verbatim

e0

“as well as the leaf morphology such as leaf length, leaf width, petiole length, and leaf area”

✓ located verbatim in the source · abstract, characters 188–281
t0

“Far-Red-Light-Induced Morphology Changes, Phytohormone, and Transcriptome Reprogramming of Chinese Kale”

✓ located verbatim in the source · title, characters 0–103

Title

Far-Red-Light-Induced Morphology Changes, Phytohormone, and Transcriptome Reprogramming of Chinese Kale (Brassica alboglabra Bailey)

Yamin Li; Haozhao Jiang; Meifang Gao; et al. International Journal of Molecular Sciences 2023. doi:10.3390/ijms24065563

Other claims from this paper (13)
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Far-red light increased leaf length, width and petiole length.

Treatment
Far-Red-Lightt0
Outcome
leaf length, leaf width, petiole lengthe0

Not reportedComparatorDirection

Verbatim

e0

“as well as the leaf morphology such as leaf length, leaf width, petiole length, and leaf area”

✓ located verbatim in the source · abstract, characters 188–281
t0

“Far-Red-Light-Induced Morphology Changes, Phytohormone, and Transcriptome Reprogramming of Chinese Kale”

✓ located verbatim in the source · title, characters 0–103

Title

Far-Red-Light-Induced Morphology Changes, Phytohormone, and Transcriptome Reprogramming of Chinese Kale (Brassica alboglabra Bailey)

Yamin Li; Haozhao Jiang; Meifang Gao; et al. International Journal of Molecular Sciences 2023. doi:10.3390/ijms24065563

Other claims from this paper (13)
Associationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Early transcript overlap between irradiated and shielded organs was significant.

Taxon
MaizeZea mayst0
Organ / stage
irradiated and shielded organse0
Outcome
overlap in transcriptome changese0

Not reportedDirection

Verbatim

e0

“After 10 min of exposure, the overlap in transcriptome changes in irradiated and shielded organs is significant”

✓ located verbatim in the source · abstract, characters 751–862
t0

“Maize Leaf”

✓ located verbatim in the source · title, characters 6–16

Title

Rapid Maize Leaf and Immature Ear Responses to UV-B Radiation

Paula Casati; Darren J. Morrow; John F. Fernandes; et al. Frontiers in Plant Science 2011. doi:10.3389/fpls.2011.00033

Other claims from this paper (8)
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors suggest moderate EC coir cultivation changes gene expression and enhances quality-associated metabolites.

Taxon
cucumberCucumis sativuse0
Treatment
coir cultivation in greenhouses with moderate ECe0
Outcome
abundance of metabolites associated with cucumber fruit qualitye0
Direction
enhancinge0

Verbatim

e0

“coir cultivation in greenhouses with moderate EC can induce a transcriptome-wide change in gene expression, thereby contributing to enhancing the abundance of metabolites associated with cucumber fruit quality”

✓ located verbatim in the source · abstract, characters 1213–1422
t0

“cucumber”

✓ located after whitespace/quote normalisation · title, characters 115–123

Title

The Impact of Nutrient Solution Electrical Conductivity on Leaf Transcriptome Contributing to the Fruit Quality of Cucumber Grown in Coir Cultivation

Lizhong He; Wentao Xu; Dongke Zhou; et al. International Journal of Molecular Sciences 2024. doi:10.3390/ijms252211864

Other claims from this paper (4)
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

A reference transcriptome of about 412,224 transcripts was assembled from around 262 million reads.

Taxon
Nepenthes khasianaNepenthes khasianat0
Outcome
reference transcriptomee0
Value
about 412,224 transcriptse0
Qualifier
around 262 million high-quality Illumina readse0

Verbatim

e0

“In total, we generated around 262 million high-quality Illumina reads. Reads were pooled, normalized and de novo assembled to generate a reference transcriptome of about 412,224 transcripts.”

✓ located verbatim in the source · abstract, characters 794–984
t0

“Nepenthes khasiana”

✓ located verbatim in the source · title, characters 12–30

Title

Pitchers of Nepenthes khasiana express several digestive-enzyme encoding genes, harbor mostly fungi and probably evolved through changes in the expression of leaf polarity genes

Jeremy Dkhar; Yogendra Kumar Bhaskar; Andrew Lynn; et al. BMC Plant Biology 2020. doi:10.1186/s12870-020-02663-2

Other claims from this paper (6)
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Unlike rice, wheat showed high photosynthetic rates per unit area already in the first leaf.

Organ / stage
in the first leafe5
Outcome
photosynthetic rates per unit areae5
Direction
highe5
Comparator
ricee5

Verbatim

e5

“Unlike rice, wheat showed high photosynthetic rates per unit area even in the first leaf”

✓ located verbatim in the source · abstract, characters 1161–1249

Title

Juvenile-to-adult phase transition in a common wheat cultivar Norin 61, and accompanying changes in leaf transcriptome

Kanata Senoo; Shunsuke Yoshioka; Koichi Yamamori; et al. Plant and Cell Physiology 2025. doi:10.1093/pcp/pcaf034

Other claims from this paper (5)
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

CGA accumulation increased during leaf growth.

Taxon
Eucommia ulmoidesEucommia ulmoidest0
Organ / stage
leaf growth and developmente0
Outcome
CGA accumulatione0
Direction
increasede0

Verbatim

e0

“UPLC-MS analysis indicated that CGA accumulation increased steadily to a high concentration during leaf growth and development, and rutin showed a high accumulation level in leaf buds and growing leaves.”

✓ located verbatim in the source · abstract, characters 816–1019
t0

“Eucommia ulmoides”

✓ located verbatim in the source · title, characters 103–120

Title

Dynamic Changes in Metabolite Accumulation and the Transcriptome during Leaf Growth and Development in Eucommia ulmoides

Long Li; Minhao Liu; Kan Shi; et al. International Journal of Molecular Sciences 2019. doi:10.3390/ijms20164030

Other claims from this paper (14)

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