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“interacted”

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Observationobservedoriginal resultmeasured

Claim · model-written summary

ZjMAPKK4 interacted with ZjNAC78.

Taxon: jujubee1
Gene: ZjMAPKK4e0
Outcome: interacted with ZjNAC78e0

Not reportedDirection

Verbatim

e0
“ZjMAPKK4 interacted with ZjNAC78”
✓ located verbatim in the source · abstract, characters 985–1017

e1
“jujube cold stress response”
✓ located verbatim in the source · abstract, characters 244–271

Title

ZjMAPKK4 Interacted With ZjNAC78 Regulates Cold Tolerance Response in Jujube

Qingfang Wang; Chaofeng Qi; Linxia Wang; et al. Plant Cell & Environment 2025. doi:10.1111/pce.15381

Other claims from this paper (6)

Intervention effect Cold treatment upregulated ZjMAPKK4 relative to other cascade genes.
Mechanism ZjMAPKK4 positively regulated jujube cold resistance.
Method / resource Transcriptome analysis screened 25 key differentially expressed genes under cold stress.
Intervention effect Silencing ZjNAC78 made sour jujube plants cold sensitive.
Intervention effect Cold response gene expression was downregulated after cold stress in ZjNAC78 silenced sour jujube.
Mechanism The authors infer that ZjMAPKK4 and ZjNAC78 regulate downstream ZjICE-ZjCBF genes and cold tolerance.

Associationobservedreview summarymeasured

Claim · model-written summary

ABH1 interacted with AtCBP20.

Taxon: ArabidopsisArabidopsise0
Gene: ABH1e0
Outcome: interactede0
Qualifier: AtCBP20e0

Not reportedDirection

Verbatim

e0
“ABH1 interacted with a second Arabidopsis protein called AtCBP20”
✓ located verbatim in the source · abstract, characters 330–394

Title

Controlled by the Cap

Science Signaling 2001. doi:10.1126/scisignal.982001tw3

Other claims from this paper (7)

Observation Hugovieux and colleagues identified ABH1 in an Arabidopsis mutation screen.
Association Cap binding required expression of AtCBP20 and ABH1.
Observation The abh1 mutants showed no significant alteration in four hormone signaling pathways.
Observation Only a small subset of genes changed expression in abh1 mutants.
Observation Known stress and oxidative response genes were downregulated in abh1.
Observation The abh1 mutants were more drought tolerant.
Observation The abh1 mutants showed increased calcium transients in response to ABA.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Different RICs interacted differentially with Ropl.

Gene: RICse0
Outcome: differentially interacted with Rople0

Not reportedTaxonDirection

Verbatim

e0
“different RICs differentially interacted with Ropl”
✓ located verbatim in the source · abstract, characters 526–576

Title

ROP GTPASE signaling in tip growth /

Guang Wu OhioLink ETD Center (Ohio Library and Information Network) 2002

Other claims from this paper (8)

Observation RIC I interacted only with active Ropl.
Observation RIC I localized to the pollen tube apical plasma membrane.
Mechanism The CRIB motif accounted for RopGAP I specificity and strong affinity for Ropl.
Observation RopGAP 1 localized to apical plasma membrane in a Ropl and CRIB dependent manner.
Intervention effect RopGAP 1 inhibited pollen tube growth.
Intervention effect RopGAP 1 reduced Ropl activity.
Intervention effect RopGAP 1 rescued Rop 1-induced depolarized pollen tube growth.
Observation The R202L RopGAP 1 mutant showed an opposite effect from RopGAP 1.

Observationobservedoriginal resultmeasured

Claim · model-written summary

SlSPI5 interacted with SlCPase.

Gene: SlSPI5e0
Outcome: interacted with cysteine protease (SlCPase)e0

Not reportedTaxon

Verbatim

e0
“SlSPI5 interacted with cysteine protease (SlCPase)”
✓ located verbatim in the source · abstract, characters 1095–1145

Title

Galactinol Regulates JA Biosynthesis to Enhance Tomato Cold Tolerance

YuDong Liu; Li Zhang; SiDa Meng; et al. Journal of Agricultural and Food Chemistry 2024. doi:10.1021/acs.jafc.3c08710

Other claims from this paper (14)

Intervention effect AnGolS1 expression enhanced tomato cold tolerance.
Observation 13-hydroperoxylinolenicacid accumulated in AnGolS1 overexpressors.
Observation 12,13-epoxylinolenicacid accumulated in AnGolS1 overexpressors.
Observation SlERF4 -7 expression increased in AnGolS1 overexpressors.
Observation SlSPI5 expression increased in AnGolS1 overexpressors.
Intervention effect Exogenous galactinol increased SlERF4 -7 and SlSPI5 expression.
Intervention effect Exogenous galactinol increased JA content.
Intervention effect SlERF4 -7 silencing reduced SlSPI5 expression.
Observation SlERF4-7 bound the SlSPI5 promoter DRE.
Observation SlCPase interacted with SlLOX5.
Observation SlCPase interacted with SlAOS2.
Intervention effect SlCPase silencing increased JA levels.
Intervention effect SlCPase silencing enhanced cold tolerance.
Mechanism Authors propose that galactinol regulates JA biosynthesis through the SlERF4-7-SlSPI5-SlCPase-SlLOX5/SlAOS2 model to enhance tomato cold tolerance.

Observationobservedoriginal resultmeasured

Claim · model-written summary

SlSWEET7a interacted with SlZIP11.

Taxon: tomatoSolanum lycopersicumt0
Gene: SlZIP11e0
Outcome: SlSWEEET7a interacted with SlZIP11e0

Verbatim

e0
“SlSWEEET7a interacted with SlZIP11”
✓ located verbatim in the source · abstract, characters 1548–1582

t0
“tomato”
✓ located verbatim in the source · title, characters 56–62

Title

SlZIP11 mediates zinc accumulation and sugar storage in tomato fruits

Jiaqi Sun; Manning Wang; Xinsheng Zhang; et al. PeerJ 2024. doi:10.7717/peerj.17473

Other claims from this paper (8)

Observation SlZIP11 expression was elevated in mature green tomato fruit.
Intervention effect Zinc deficiency inhibited SlZIP11 expression.
Intervention effect Zinc toxicity induced SlZIP11 expression.
Intervention effect SlZIP11 silencing significantly increased tomato fruit zinc content.
Intervention effect SlZIP11 overexpression reduced zinc content in mature green fruit.
Intervention effect SlZIP11 silencing altered fructose and glucose content.
Intervention effect SlZIP11 overexpression altered fructose and glucose content.
Mechanism SlSWEET7a and SlZIP11 heterodimerization increased intracellular oligomeric complexes by changing subcellular targeting.

Associationobservedoriginal resultmeasured

Claim · model-written summary

All treatments interacted with temperature conditions.

Taxon: Scarlet Globemallowt0
Treatment: treatmentse0
Outcome: interactede0
Qualifier: temperature conditionse0

Not reportedDirection

Verbatim

t0
“Scarlet Globemallow”
✓ located verbatim in the source · title, characters 28–47

e0
“All treatments interacted with temperature conditions”
✓ located verbatim in the source · abstract, characters 180–233

Title

Germination Requirements of Scarlet Globemallow

R. J. Page; D. L. Goodwin; N. E. West Journal of Range Management 1966. doi:10.2307/3895401

Other claims from this paper (4)

Intervention effect Acid scarification increased germination percentage.
Intervention effect Mechanical scarification increased germination percentage.
Intervention effect Diethyl dioxide produced the highest germination rate.
Intervention effect Alternating 12 hour periods at 15 and 22 C were most favorable for germination percentages.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The lectin interacted with several saccharides.

Taxon: CowpeasVigna unguiculatat0
Gene: lectine0
Outcome: interacted with several saccharidese0

Not reportedDirection

Verbatim

e0
“The lectin interacted with several saccharides.”
✓ located verbatim in the source · abstract, characters 724–771

t0
“Cowpeas”
✓ located verbatim in the source · title, characters 34–41

Title

Characterization of a Lectin From Cowpeas

B. J. Roberson; D. R. Strength Preparative Biochemistry 1983. doi:10.1080/00327488308068734

Other claims from this paper (6)

Observation A cowpea lectin without blood group specificity was isolated.
Observation Purification steps generally increased lectin agglutination activity.
Observation The isolated lectin was homogeneous according to electrophoresis and ultracentrifugation.
Observation The native lectin had a molecular weight of approximately 55,000.
Observation The lectin had very low sulfur amino acid content and relatively high aspartic and glutamic acid content.
Observation The lectin had less than 1% saccharides.

Observationobservedoriginal resultmeasured

Claim · model-written summary

OsSCYL2 interacted with OsSPL28.

Gene: OsSCYL2e0
Outcome: interacted with OsSPL28e0

Not reportedTaxon

Verbatim

e0
“OsSCYL2 interacted with OsSPL28”
✓ located verbatim in the source · abstract, characters 894–925

Title

A conserved clathrin‐coated vesicle component, OsSCYL2, regulates plant innate immunity in rice

Yao Yao; Jihua Zhou; Can Cheng; et al. Plant Cell & Environment 2021. doi:10.1111/pce.14240

Other claims from this paper (5)

Intervention effect OsSCYL2 mutation caused light-dependent hypersensitive-response-like cell death in rice.
Observation OsSCYL2 mutants had photosynthetic defects.
Observation OsSCYL2 mutants had enhanced bacterial pathogen resistance.
Observation OsSCYL2 localized to Golgi, trans-Golgi network and prevacuolar compartment.
Mechanism OsCHC1 mediated the OsSCYL2-OsSPL28 interaction.

Observationobservedoriginal resultmeasured

Claim · model-written summary

CfEC12 interacted with apple MdNIMIN2.

Taxon: appleMalus domesticae3
Gene: MdNIMIN2e3
Outcome: interactede3

Verbatim

e3
“CfEC12 interacted with apple MdNIMIN2”
✓ located verbatim in the source · abstract, characters 544–581

Title

A fungal CFEM‐containing effector targets NPR1 regulator NIMIN2 to suppress plant immunity

Shengping Shang; Guangli Liu; Song Zhang; et al. Plant Biotechnology Journal 2023. doi:10.1111/pbi.14166

Other claims from this paper (6)

Observation CfEC12 is required for the virulence of Colletotrichum fructicola.
Intervention effect Overexpression of CfEC12 suppressed BAX-triggered cell death, callose deposition and ROS burst in Nicotiana benthamiana.
Mechanism MdNIMIN2 was required for apple resistance to C. fructicola infection.
Intervention effect MdNIMIN2 rescued the defence reduction in NbNIMIN2-silenced N. benthamiana.
Observation CfEC12 and MdNPR1 both interacted with a common region of MdNIMIN2.
Mechanism CfEC12 may suppress the MdNIMIN2-MdNPR1 interaction by competitive target binding.

Observationobservedoriginal resultmeasured

Claim · model-written summary

TSR interacted with OsMADS1.

Taxon: riceOryza sativat0
Gene: TSRe0
Outcome: interacted with OsMADS1e0

Verbatim

e0
“TSR interacted with OsMADS1”
✓ located verbatim in the source · abstract, characters 1552–1579

t0
“rice”
✓ located verbatim in the source · title, characters 73–77

Title

An AP2/ERF transcription factor controls generation of the twin-seedling rice

Kaichong Teng; Neng Zhao; Yonghong Xie; et al. Journal of Advanced Research 2024. doi:10.1016/j.jare.2024.12.013

Other claims from this paper (7)

Observation TSR was cloned and encodes an AP2/ERF transcription factor.
Association TSR mutations produced twin seedlings.
Observation The tsr mutant showed open spikelet hulls.
Observation The tsr mutant had changed stamen and ovule numbers.
Observation The tsr ovary formed two conjugated ovules and a seed with two viable embryos.
Mechanism TSR binds promoters and regulates genes for spikelet determination and ovule identity.
Mechanism OsMADS1 interaction modulated TSR transcriptional activity.

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