Paper · 2012 · Plant Cell & Environment

The shoot regeneration capacity of excised Arabidopsis cotyledons is established during the initial hours after injury and is modulated by a complex genetic network of light signalling

BLAIR NAMETH; STEVEN J. DINKA; STEVEN P. CHATFIELD; et al.

14
claims
24
verbatim quotes
45
citations
3
research areas
—
Not open access

Abstract

Excised plant tissues (explants) can regenerate new shoot apical meristems in vitro, but regeneration rates can be inexplicably variable. Light affects rates of shoot regeneration, but the underlying mechanisms are poorly understood. Here, excised Arabidopsis cotyledons were dark-light shifted to define the timing of explant light sensitivity. Mutants and pharmacological agents were employed to uncover underlying physiological and genetic mechanisms. Unexpectedly, explants were most light sensitive during the initial hours post-excision with respect to shoot regeneration. Only ∼100 µmol m(-2 ) s(-1) of fluorescent light was sufficient to induce reactive oxygen species (ROS) accumulation in new explants. By 48 h post-excision, induction of ROS, or quenching of ROS by xanthophylls, increased or decreased shoot regeneration, respectively. Phytochrome A-mediated signalling suppressed light inhibition of regeneration. Early exposure to blue/UV-A wavelengths inhibited regeneration, involving photoreceptor CRY1. Downstream transcription factor HY5 mediated explant photoprotection, perhaps by promoting anthocyanin accumulation, a pigment also induced by cytokinin. Surprisingly, early light inhibition of shoot regeneration was dependent on polar auxin transport. Early exposure to ethylene stimulated dark-treated explants to regenerate, but inhibited light-treated explants. We propose that variability in long-term shoot regeneration may arise within the initial hours post-excision, from inadvertent, variable exposure of explants to light, modulated by hormones.

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Claims 14

Observationobservedoriginal resultmeasured

Claim · model-written summary

Explants were most light sensitive during initial hours after excision.

Taxon
explantse0
Outcome
shoot regeneratione0
Qualifier
initial hours post-excisione0

Verbatim

e0

“explants were most light sensitive during the initial hours post-excision with respect to shoot regeneration”

✓ located verbatim in the source · abstract, characters 469–577 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Fluorescent light of about 100 µmol induced ROS in new explants.

Taxon
explantse0
Treatment
∼100 µmol m(-2 ) s(-1) of fluorescent lighte0
Outcome
reactive oxygen species (ROS) accumulatione0

Not reportedComparatorDirection

Verbatim

e0

“Only ∼100 µmol m(-2 ) s(-1) of fluorescent light was sufficient to induce reactive oxygen species (ROS) accumulation in new explants”

✓ located verbatim in the source · abstract, characters 579–711 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ROS induction increased shoot regeneration by 48 hours.

Taxon
Arabidopsis cotyledonst0
Treatment
induction of ROSe0
Outcome
shoot regeneratione0
Direction
increasede0

Not reportedComparator

Verbatim

e0

“By 48 h post-excision, induction of ROS, or quenching of ROS by xanthophylls, increased or decreased shoot regeneration, respectively”

✓ located verbatim in the source · abstract, characters 713–846 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

ROS quenching by xanthophylls decreased shoot regeneration.

Taxon
Arabidopsis cotyledonst0
Treatment
quenching of ROS by xanthophyllse0
Outcome
shoot regeneratione0
Direction
decreasede0

Not reportedComparator

Verbatim

e0

“By 48 h post-excision, induction of ROS, or quenching of ROS by xanthophylls, increased or decreased shoot regeneration, respectively”

✓ located verbatim in the source · abstract, characters 713–846 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

Phytochrome A signaling suppressed light inhibition of regeneration.

Taxon
Arabidopsis cotyledonst0
Gene
Phytochrome Ae0
Outcome
light inhibition of regeneratione0
Qualifier
suppressede0

Verbatim

e0

“Phytochrome A-mediated signalling suppressed light inhibition of regeneration”

✓ located verbatim in the source · abstract, characters 848–925 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Early blue/UV-A exposure inhibited regeneration.

Taxon
Arabidopsis cotyledonst0
Treatment
Early exposure to blue/UV-A wavelengthse0
Gene
CRY1e0
Outcome
regeneratione0
Direction
inhibitede0

Not reportedComparator

Verbatim

e0

“Early exposure to blue/UV-A wavelengths inhibited regeneration, involving photoreceptor CRY1”

✓ located verbatim in the source · abstract, characters 927–1019 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Mechanismobservedoriginal resultnegativemeasured

Claim · model-written summary

CRY1 was involved in the blue/UV-A inhibition of regeneration.

Taxon
Arabidopsis cotyledonst0
Gene
CRY1e0
Outcome
regeneratione0

Verbatim

e0

“Early exposure to blue/UV-A wavelengths inhibited regeneration, involving photoreceptor CRY1”

✓ located verbatim in the source · abstract, characters 927–1019 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

HY5 mediated explant photoprotection.

Taxon
Arabidopsis cotyledonst0
Gene
HY5e0
Outcome
explant photoprotectione0

Verbatim

e0

“Downstream transcription factor HY5 mediated explant photoprotection”

✓ located verbatim in the source · abstract, characters 1021–1089 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

HY5 perhaps promoted anthocyanin accumulation.

Taxon
Arabidopsis cotyledonst0
Outcome
anthocyanin accumulatione0
Qualifier
perhaps by promotinge0

Verbatim

e0

“perhaps by promoting anthocyanin accumulation”

✓ located verbatim in the source · abstract, characters 1091–1136 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Cytokinin induced anthocyanin pigment.

Taxon
Arabidopsis cotyledonst0
Treatment
cytokinine0
Outcome
pigmente0

Not reportedComparatorDirection

Verbatim

e0

“a pigment also induced by cytokinin”

✓ located verbatim in the source · abstract, characters 1138–1173 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Mechanismobservedoriginal resultnegativemeasured

Claim · model-written summary

Early light inhibition depended on polar auxin transport.

Taxon
Arabidopsis cotyledonst0
Outcome
early light inhibition of shoot regeneratione0
Qualifier
polar auxin transporte0

Verbatim

e0

“early light inhibition of shoot regeneration was dependent on polar auxin transport”

✓ located verbatim in the source · abstract, characters 1189–1272 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethylene stimulated regeneration in dark-treated explants.

Taxon
explantse0
Treatment
Early exposure to ethylenee0
Outcome
regeneratee0
Direction
stimulatede0

Not reportedComparator

Verbatim

e0

“Early exposure to ethylene stimulated dark-treated explants to regenerate”

✓ located verbatim in the source · abstract, characters 1274–1347 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ethylene inhibited regeneration in light-treated explants.

Taxon
explantse0
Outcome
light-treated explantse0
Direction
inhibitede0

Not reportedTreatmentComparator

Verbatim

e0

“but inhibited light-treated explants”

✓ located verbatim in the source · abstract, characters 1349–1385 · show in text ↑
t0

“Arabidopsis cotyledons”

✓ located verbatim in the source · title, characters 43–65 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Authors proposed that early variable light exposure causes long-term regeneration variability.

Taxon
explantse0
Outcome
variability in long-term shoot regeneratione0
Qualifier
variable exposure of explants to light, modulated by hormonese0

Verbatim

e0

“variability in long-term shoot regeneration may arise within the initial hours post-excision, from inadvertent, variable exposure of explants to light, modulated by hormones”

✓ located verbatim in the source · abstract, characters 1403–1576 · show in text ↑

reactive oxygen species · growth · ArabidopsisPositive and negative results

9 papers: 7 positive, 2 negative or no effect

6 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

5 papers more in this group

See all 9 papers →

uv · growth · ArabidopsisPositive and negative results

11 papers: 4 positive, 7 negative or no effect

6 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

7 papers more in this group

See all 11 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.