Paper · 2022 · BMC Plant Biology

Wound-induced signals regulate root organogenesis in Arabidopsis explants

Seung Yong Shin; Su-Jin Park; Hyun-Soon Kim; et al.

8
claims
16
verbatim quotes
21
citations
3
research areas
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Open access · cc-by

Abstract

Abstract Background Reactive oxygen species (ROS) and calcium ions (Ca 2+ ) are representative signals of plant wound responses. Wounding triggers cell fate transition in detached plant tissues and induces de novo root organogenesis. While the hormonal regulation of root organogenesis has been widely studied, the role of early wound signals including ROS and Ca 2+ remains largely unknown. Results We identified that ROS and Ca 2+ are required for de novo root organogenesis, but have different functions in Arabidopsis explants. The inhibition of the ROS and Ca 2+ signals delayed root development in detached leaves. Examination of the auxin signaling pathways indicated that ROS and Ca 2+ did not affect auxin biosynthesis and transport in explants. Additionally, the expression of key genes related to auxin signals during root organogenesis was not significantly affected by the inhibition of ROS and Ca 2+ signals. The addition of auxin partially restored the suppression of root development by the ROS inhibitor; however, auxin supplementation did not affect root organogenesis in Ca 2+ -depleted explants. Conclusions Our results indicate that, while both ROS and Ca 2+ are key molecules, at least in part of the auxin signals acts downstream of ROS signaling, and Ca 2+ acts downstream of auxin during de novo root organogenesis in leaf explants.

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Claims 8

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

ROS was required for de novo root organogenesis.

Taxon
ArabidopsisArabidopsist0
Compound
ROSe0
Outcome
de novo root organogenesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ROS and Ca 2+ are required for de novo root organogenesis”

✓ located verbatim in the source · abstract, characters 419–476 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Calcium was required for de novo root organogenesis.

Taxon
ArabidopsisArabidopsist0
Compound
Ca 2+e0
Outcome
de novo root organogenesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ROS and Ca 2+ are required for de novo root organogenesis”

✓ located verbatim in the source · abstract, characters 419–476 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

ROS inhibition delayed root development in detached leaves.

Taxon
ArabidopsisArabidopsist0
Organ / stage
detached leavese0
Treatment
inhibition of the ROSe0
Outcome
root developmente0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The inhibition of the ROS and Ca 2+ signals delayed root development in detached leaves.”

✓ located verbatim in the source · abstract, characters 532–620 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Calcium signal inhibition delayed root development in detached leaves.

Taxon
ArabidopsisArabidopsist0
Organ / stage
detached leavese0
Treatment
Ca 2+ signalse0
Outcome
root developmente0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The inhibition of the ROS and Ca 2+ signals delayed root development in detached leaves.”

✓ located verbatim in the source · abstract, characters 532–620 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

ROS and calcium did not affect auxin biosynthesis and transport.

Taxon
ArabidopsisArabidopsist0
Outcome
auxin biosynthesis and transporte0
Direction
did not affecte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ROS and Ca 2+ did not affect auxin biosynthesis and transport in explants”

✓ located verbatim in the source · abstract, characters 680–753 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Inhibiting ROS and calcium did not significantly affect expression of auxin signal genes.

Taxon
ArabidopsisArabidopsist0
Treatment
inhibition of ROS and Ca 2+ signalse0
Outcome
expression of key genes related to auxin signalse0
Direction
not significantly affectede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the expression of key genes related to auxin signals during root organogenesis was not significantly affected by the inhibition of ROS and Ca 2+ signals”

✓ located verbatim in the source · abstract, characters 769–921 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Auxin partly restored root development under ROS inhibition.

Taxon
ArabidopsisArabidopsist0
Treatment
addition of auxine0
Outcome
root developmente0
Direction
partially restorede0
Comparator
ROS inhibitore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The addition of auxin partially restored the suppression of root development by the ROS inhibitor”

✓ located verbatim in the source · abstract, characters 923–1020 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Auxin supplementation did not affect roots in calcium-depleted explants.

Taxon
ArabidopsisArabidopsist0
Treatment
auxin supplementatione0
Outcome
root organogenesise0
Direction
did not affecte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“auxin supplementation did not affect root organogenesis in Ca 2+ -depleted explants”

✓ located verbatim in the source · abstract, characters 1031–1114 · show in text ↑
t0

“Arabidopsis explants”

✓ located verbatim in the source · title, characters 53–73 · show in text ↑

calcium(2+) · growth · ArabidopsisPositive and negative results

5 papers: 3 positive, 2 negative or no effect

1 paper in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

reactive oxygen species · molecular: expression · ArabidopsisPositive and negative results

6 papers: 4 positive, 2 negative or no effect

1 paper in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

2 papers more in this group

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reactive oxygen species · growth · ArabidopsisPositive and negative results

9 papers: 7 positive, 2 negative or no effect

1 paper in the same direction as this paper · 7 in the opposite direction

  1. positive
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

calcium(2+) · molecular: expression · ArabidopsisResults agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. negative
  2. negative
See all 3 papers →

class · growth · ArabidopsisPositive and negative results

70 papers: 42 positive, 28 negative or no effect

41 papers in the same direction as this paper · 28 in the opposite direction

  1. negative
  2. negative
  3. no effect

66 papers more in this group

See all 70 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.