Paper · 2008 · Journal of Experimental Botany

A novel activator-type ERF of Thinopyrum intermedium, TiERF1, positively regulates defence responses

HongXia Liang; Yan Lu; HongXia Liu; et al.

16
claims
64
verbatim quotes
41
citations
3
research areas
✓
Open access · cc-by-nc

Abstract

Thinopyrum intermedium is resistant to many different pathogens. To understand the roles of ethylene response factors (ERFs) in defence responses, the first member of the ERF family in T. intermedium, TiERF1, was characterized and functionally analysed in this study. The TiERF1 gene encodes a putative protein of 292 amino acids, belonging to the B3 subgroup of the ERF transcription factor family. Biochemical assays demonstrated that the TiERF1 protein is capable of binding to the GCC box, a cis-element present in the promoters of pathogenesis-related (PR) genes, and possessing transactivation activity, as well as localizing to the nucleus. The transcript of TiERF1 in T. intermedium is rapidly induced by infection with Rhizoctonia cerealis, Fusarium graminearum, or Blumeria graminis, and ethylene, jasmonic acid, and salicylic acid treatments. More importantly, the ectopic expression of TiERF1 in tobacco activated the transcript of the PR genes of tobacco with a GCC box cis-element, and ACO and ACS genes key to ethylene synthesis, and in turn improved the resistance level to Alternaria alternata and tobacco mosaic virus, as well as causing some phenotypic changes associated with ethylene response in the transgenic tobacco plants. Taken together, TiERF1 protein as an ERF transcription activator positively regulates defence responses via the activation of some defence-related genes.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 16

Observationobservedoriginal resultmeasured

Claim · model-written summary

TiERF1 encodes a 292-amino-acid ERF protein.

Gene
TiERF1e0e1e2e3
Outcome
putative proteine0e1e2e3
Value
292 amino acidse0e1e2e3
Qualifier
B3 subgroupe0e1e2e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The TiERF1 gene encodes a putative protein of 292 amino acids, belonging to the B3 subgroup of the ERF transcription factor family”

✓ located verbatim in the source · abstract, characters 268–398 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

TiERF1 binds the GCC box.

Gene
TiERF1e0e1e2e3
Outcome
binding to the GCC boxe0e1e2e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the TiERF1 protein is capable of binding to the GCC box”

✓ located verbatim in the source · abstract, characters 437–492 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

TiERF1 has transactivation activity.

Gene
TiERF1e0e1e2e3
Outcome
transactivation activitye0e1e2e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“possessing transactivation activity”

✓ located verbatim in the source · abstract, characters 573–608 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

TiERF1 localizes to the nucleus.

Gene
TiERF1e0e1e2e3
Outcome
localizing to the nucleuse0e1e2e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“localizing to the nucleus”

✓ located verbatim in the source · abstract, characters 621–646 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Rhizoctonia cerealis infection induces TiERF1 transcription.

Treatment
infection with Rhizoctonia cerealise0e1e2e3
Interactor
Rhizoctonia cerealisCeratobasidium cerealee0e1e2e3pathogen
Gene
TiERF1e0e1e2e3
Outcome
TiERF1e0e1e2e3
Direction
inducede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗
Ceratobasidium cereale
Ceratobasidium cereale · InteractorElizabeth Bush, Virginia Polytechnic Institute and State University, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“TiERF1 in T. intermedium is rapidly induced by infection with Rhizoctonia cerealis”

✓ located verbatim in the source · abstract, characters 666–748 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Fusarium graminearum infection induces TiERF1 transcription.

Treatment
infection with Rhizoctonia cerealis, Fusarium graminearume0e1e2e3
Interactor
Fusarium graminearumFusarium graminearume0e1e2e3pathogen
Gene
TiERF1e0e1e2e3
Outcome
TiERF1e0e1e2e3
Direction
inducede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗
Fusarium graminearum
Fusarium graminearum · InteractorScot Nelson from Honolulu, USA · CC0 · Wikimedia Commons ↗

Verbatim

e0

“TiERF1 in T. intermedium is rapidly induced by infection with Rhizoctonia cerealis, Fusarium graminearum”

✓ located verbatim in the source · abstract, characters 666–770 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Blumeria graminis infection induces TiERF1 transcription.

Treatment
infection with Rhizoctonia cerealis, Fusarium graminearum, or Blumeria graminise0e1e2e3
Interactor
Blumeria graminisBlumeria graminise0e1e2e3pathogen
Gene
TiERF1e0e1e2e3
Outcome
TiERF1e0e1e2e3
Direction
inducede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗
Blumeria graminis
Blumeria graminis · Interactor · picture from its Wikimedia Commons categoryClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“TiERF1 in T. intermedium is rapidly induced by infection with Rhizoctonia cerealis, Fusarium graminearum, or Blumeria graminis”

✓ located verbatim in the source · abstract, characters 666–792 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ethylene induces TiERF1 transcription.

Treatment
ethylenee0e1e2e3
Gene
TiERF1e0e1e2e3
Outcome
TiERF1e0e1e2e3
Direction
inducede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“and ethylene, jasmonic acid, and salicylic acid treatments”

✓ located verbatim in the source · abstract, characters 794–852 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Jasmonic acid induces TiERF1 transcription.

Treatment
jasmonic acide0e1e2e3
Gene
TiERF1e0e1e2e3
Outcome
TiERF1e0e1e2e3
Direction
inducede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ethylene, jasmonic acid, and salicylic acid treatments”

✓ located verbatim in the source · abstract, characters 798–852 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salicylic acid induces TiERF1 transcription.

Treatment
salicylic acide0e1e2e3
Gene
TiERF1e0e1e2e3
Outcome
TiERF1e0e1e2e3
Direction
inducede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ethylene, jasmonic acid, and salicylic acid treatments”

✓ located verbatim in the source · abstract, characters 798–852 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ectopic TiERF1 expression activates tobacco PR genes.

Treatment
ectopic expression of TiERF1e0e1e2e3
Gene
TiERF1e0e1e2e3
Outcome
transcript of the PR genese0e1e2e3
Direction
activatede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the ectopic expression of TiERF1 in tobacco activated the transcript of the PR genes of tobacco with a GCC box cis-element”

✓ located verbatim in the source · abstract, characters 872–994 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ectopic TiERF1 expression activates tobacco ACO and ACS genes.

Treatment
ectopic expression of TiERF1e0e1e2e3
Gene
ACO and ACS genese0e1e2e3
Outcome
ACO and ACS genese0e1e2e3
Direction
activatede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“and ACO and ACS genes key to ethylene synthesis”

✓ located verbatim in the source · abstract, characters 996–1043 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ectopic TiERF1 raises tobacco resistance to Alternaria alternata.

Treatment
ectopic expression of TiERF1e0e1e2e3
Interactor
Alternaria alternataAlternaria alternatae0e1e2e3pathogen
Gene
TiERF1e0e1e2e3
Outcome
resistance level to Alternaria alternatae0e1e2e3
Direction
improvede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Alternaria alternata
Alternaria alternata · Interactor · picture from its Wikimedia Commons categoryMarta Hiromi Taniwaki, Secretaria de Agricultura e Abastecimento · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ectopic TiERF1 raises tobacco resistance to tobacco mosaic virus.

Treatment
ectopic expression of TiERF1e0e1e2e3
Interactor
tobacco mosaic virusTobacco mosaic viruse0e1e2e3pathogen
Gene
TiERF1e0e1e2e3
Outcome
resistance levele0e1e2e3
Direction
improvede0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Tobacco mosaic virus
Tobacco mosaic virus · InteractorFrank Vincentz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“and tobacco mosaic virus”

✓ located verbatim in the source · abstract, characters 1111–1135 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

TiERF1 expression caused ethylene-related tobacco phenotypic changes.

Treatment
ectopic expression of TiERF1e0e1e2e3
Gene
TiERF1e0e1e2e3
Outcome
phenotypic changes associated with ethylene responsee0e1e2e3
Direction
causinge0e1e2e3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“causing some phenotypic changes associated with ethylene response in the transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 1148–1246 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer TiERF1 activates defence genes to regulate defence.

Gene
TiERF1e0e1e2e3
Outcome
defence responsese0e1e2e3
Qualifier
activation of some defence-related genese0e1e2e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Thinopyrum intermedium
Thinopyrum intermedium · TaxonDehaan · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“TiERF1 protein as an ERF transcription activator positively regulates defence responses via the activation of some defence-related genes”

✓ located verbatim in the source · abstract, characters 1264–1400 · show in text ↑
e1

“TiERF1 in T. intermedium is rapidly induced”

✓ located verbatim in the source · abstract, characters 666–709 · show in text ↑
e2

“the ectopic expression of TiERF1 in tobacco activated”

✓ located verbatim in the source · abstract, characters 872–925 · show in text ↑
e3

“improved the resistance level to Alternaria alternata”

✓ located verbatim in the source · abstract, characters 1057–1110 · show in text ↑

overexpression · Tobacco mosaic virus · Nicotiana tabacum (tobacco)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. negative
  3. positive
See all 4 papers →

overexpression · molecular: expression · Nicotiana tabacum (tobacco)Positive and negative results

22 papers: 16 positive, 6 negative or no effect

15 papers in the same direction as this paper · 6 in the opposite direction

  1. no effect
  2. negative
  3. negative

18 papers more in this group

See all 22 papers →

overexpression · Alternaria alternata · Nicotiana tabacum (tobacco)Results agree

4 papers: 4 positive, 0 negative or no effect

3 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.