Paper · 2019 · Russian Journal of Plant Physiology

The ABA- and Stress-Induced Expression of the ArabidopsisthalianaAt4g0180 Gene Is Determined by the Cis-Elements Responsible for Binding the ABA-Dependent Trans-Factors

N. V. Vinogradov; A. A. Andreeva; M. N. Danilova; et al.

10
claims
22
verbatim quotes
2
citations
2
research areas
—
Not open access

Abstract

Abstract In silico analysis of the promoter region of the At4g01870 gene of Arabidopsis thaliana (L.) Heynh. showed the presence of ABRE, W-box, RAV1-A, MYB, and LFY cis-elements in the sequence. These regulatory motifs bind the transcription factors involved in responses to abscisic acid (ABA) and stresses. Stable transgenic plants carrying the β-glucuronidase gene under the control of the 5'-deletion fragments of the At4g01870 promoter were obtained. According to the results of histochemical staining of transformants, gene expression was induced by abiotic stress and was most significant in the conductive tissues of the root, leaves, and sepals as well as in flowers. The study of At4g01870 gene expression by RT-PCR confirmed that the gene transcript content increased after the exposure of plants to a solution of NaCl or at 37°C and after ABA treatment; however, hypothermia almost unchanged the level of accumulation of the transcripts. Along with ABA, expression of the At4g01870 gene was induced by indolylacetic and salicylic acids and ethylene precursor 1-aminocyclopropane-1-carboxylic acid; it was hardly regulated by methyl jasmonate and inhibited by cytokinin. The TolB-like protein, encoded by the At4g01870 gene, functions as a type of platform, based on which protein complexes are assembled. Given the previously identified ABA-binding properties of the protein At4g01870 and the presence of the ABA-dependent cis-elements in the promoter of its coding gene, it can be assumed that the protein encoded by the At4g01870 gene allows to control the hormonal signals in the cell, providing a structural platform for the interaction of specific effector proteins, trans-factors and ion channels.

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Claims 10

Observationobservedoriginal resultsimulated

Claim · model-written summary

The At4g01870 promoter contains ABRE, W-box, RAV1-A, MYB and LFY motifs.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Gene
At4g01870e0
Outcome
presence of ABRE, W-box, RAV1-A, MYB, and LFY cis-elementse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“promoter region of the At4g01870 gene of Arabidopsis thaliana (L.) Heynh. showed the presence of ABRE, W-box, RAV1-A, MYB, and LFY cis-elements”

✓ located verbatim in the source · abstract, characters 35–178 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Abiotic stress induced reporter expression, especially in conductive root tissues, leaves, sepals and flowers.

Taxon
ArabidopsisthalianaAt4g0180t0
Organ / stage
conductive tissues of the root, leaves, and sepals as well as in flowerse0
Treatment
abiotic stresse0
Outcome
gene expressione0
Direction
inducede0

Not reportedComparator

Verbatim

t0

“ArabidopsisthalianaAt4g0180”

✓ located verbatim in the source · title, characters 46–73 · show in text ↑
e0

“gene expression was induced by abiotic stress and was most significant in the conductive tissues of the root, leaves, and sepals as well as in flowers”

✓ located verbatim in the source · abstract, characters 526–676 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At4g01870 transcript content increased after NaCl exposure, heat at 37°C, and ABA treatment.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
a solution of NaCl or at 37°C and after ABA treatmente0
Gene
At4g01870e0
Outcome
gene transcript contente0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“At4g01870 gene expression by RT-PCR confirmed that the gene transcript content increased after the exposure of plants to a solution of NaCl or at 37°C and after ABA treatment”

✓ located verbatim in the source · abstract, characters 691–865 · show in text ↑
e1

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Hypothermia left At4g01870 transcript accumulation almost unchanged.

Taxon
Arabidopsis thalianaArabidopsis thalianae2
Treatment
hypothermiae0
Gene
At4g01870e1
Outcome
level of accumulation of the transcriptse0
Direction
almost unchangede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“hypothermia almost unchanged the level of accumulation of the transcripts”

✓ located verbatim in the source · abstract, characters 876–949 · show in text ↑
e1

“At4g01870 gene expression”

✓ located verbatim in the source · abstract, characters 691–716 · show in text ↑
e2

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Indolylacetic acid induced At4g01870 expression.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
indolylacetice0
Outcome
expression of the At4g01870 genee0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of the At4g01870 gene was induced by indolylacetic and salicylic acids and ethylene precursor 1-aminocyclopropane-1-carboxylic acid”

✓ located verbatim in the source · abstract, characters 967–1109 · show in text ↑
e1

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Salicylic acid induced At4g01870 expression.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
salicylic acidse0
Outcome
expression of the At4g01870 genee0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of the At4g01870 gene was induced by indolylacetic and salicylic acids and ethylene precursor 1-aminocyclopropane-1-carboxylic acid”

✓ located verbatim in the source · abstract, characters 967–1109 · show in text ↑
e1

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The ethylene precursor 1-aminocyclopropane-1-carboxylic acid induced At4g01870 expression.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
1-aminocyclopropane-1-carboxylic acide0
Outcome
expression of the At4g01870 genee0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“expression of the At4g01870 gene was induced by indolylacetic and salicylic acids and ethylene precursor 1-aminocyclopropane-1-carboxylic acid”

✓ located verbatim in the source · abstract, characters 967–1109 · show in text ↑
e1

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Methyl jasmonate hardly regulated At4g01870 expression.

Taxon
Arabidopsis thalianaArabidopsis thalianae2
Treatment
methyl jasmonatee0
Outcome
expression of the At4g01870 genee1
Direction
hardly regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“it was hardly regulated by methyl jasmonate”

✓ located verbatim in the source · abstract, characters 1111–1154 · show in text ↑
e1

“expression of the At4g01870 gene”

✓ located verbatim in the source · abstract, characters 967–999 · show in text ↑
e2

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Cytokinin inhibited At4g01870 expression.

Taxon
Arabidopsis thalianaArabidopsis thalianae2
Treatment
cytokinine0
Outcome
expression of the At4g01870 genee1
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“inhibited by cytokinin”

✓ located verbatim in the source · abstract, characters 1159–1181 · show in text ↑
e1

“expression of the At4g01870 gene”

✓ located verbatim in the source · abstract, characters 967–999 · show in text ↑
e2

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

The authors propose that At4g01870 protein serves as a platform for hormonal signal control.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Gene
At4g01870e0
Outcome
control the hormonal signals in the celle0
Qualifier
providing a structural platform for the interaction of specific effector proteins, trans-factors and ion channelse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“it can be assumed that the protein encoded by the At4g01870 gene allows to control the hormonal signals in the cell, providing a structural platform for the interaction of specific effector proteins, trans-factors and ion channels”

✓ located verbatim in the source · abstract, characters 1485–1715 · show in text ↑
e1

“Arabidopsis thaliana (L.) Heynh.”

✓ located verbatim in the source · abstract, characters 76–108 · show in text ↑

1-aminocyclopropanecarboxylic acid · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

10 papers: 8 positive, 2 negative or no effect

7 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. no effect
  3. positive

6 papers more in this group

See all 10 papers →

(-)-methyl jasmonate · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

11 papers: 8 positive, 3 negative or no effect

2 papers in the same direction as this paper · 8 in the opposite direction

  1. positive
  2. positive
  3. positive

7 papers more in this group

See all 11 papers →

salicylic acid · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

28 papers: 16 positive, 12 negative or no effect

15 papers in the same direction as this paper · 12 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

24 papers more in this group

See all 28 papers →

(+)-abscisic acid · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

50 papers: 31 positive, 19 negative or no effect

30 papers in the same direction as this paper · 19 in the opposite direction

  1. negative
  2. no effect
  3. negative

46 papers more in this group

See all 50 papers →

class · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

43 papers: 23 positive, 20 negative or no effect

19 papers in the same direction as this paper · 23 in the opposite direction

  1. positive
  2. positive
  3. positive

39 papers more in this group

See all 43 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.