Paper · 2020 · Plant Physiology and Biochemistry

Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition

Romesh Eric Romy Kimbembe; Guangyan Li; Guanfu Fu; et al.

14
claims
30
verbatim quotes
23
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

Grain filling is the final determinant of yield, and this process is susceptible to abiotic stresses. Salicylic acid (SA) regulates grain filling in rice plants. A comparative proteomic study was conducted to understand how SA mediates grain filling under soil drying (SD) condition. Zhefu802 and its near-isogenic line (NIL) were planted in pots in an artificial chamber. SA (100 mg L−1) was applied, followed by SD treatment (with a water potential of −30 to −35 kPa) at anthesis. The results showed that the grain yield and grain weight significantly decreased under SD in Zhefu802, but not in its NIL variety. SD also decreased expression of photosynthesis-related proteins in grains of Zhefu802, which resulted in its poorer drought resistance. Furthermore, the decreased grain filling rate rather than the grain size explained the observed decreased grain weight and grain yield under SD. Interestingly, these reductions were reversed by SA. Expression of proteins involved in glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxication, oxidative phosphorylation, transcription, translation, and signal transduction, were significantly down-regulated under SD and were significantly up-regulated in response to SA. The expression of these proteins was examined at transcriptional level and similar results were obtained. Inhibited expression of these proteins and related pathways contributed to the observed decrease in the grain filling rate of Zhefu802, and application of SA up-regulated expression of these proteins to improve grain weight. The findings of this study provide new insights into grain filling regulation by SA, and offer the scientific foundation for cultivation practice.

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Claims 14

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

SD significantly decreased grain yield and grain weight in Zhefu802 in a pot experiment

Taxon
rice (Oryza sativa L.)Oryza sativat0
Material
Zhefu802e1
Treatment
SDe1
Outcome
grain yield and grain weighte1
Direction
decreasede1
Setting
artificial chambere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e0

“Zhefu802 and its near-isogenic line (NIL) were planted in pots in an artificial chamber”

✓ located verbatim in the source · abstract, characters 284–371 · show in text ↑
e1

“The results showed that the grain yield and grain weight significantly decreased under SD in Zhefu802, but not in its NIL variety”

✓ located verbatim in the source · abstract, characters 483–612 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Grain yield and grain weight of the NIL variety were not reduced by SD, unlike Zhefu802

Taxon
rice (Oryza sativa L.)Oryza sativat0
Material
NIL varietye1
Treatment
SDe1
Outcome
grain yield and grain weighte1
Direction
no_changeinferrede1
Comparator
Zhefu802e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e1

“The results showed that the grain yield and grain weight significantly decreased under SD in Zhefu802, but not in its NIL variety”

✓ located verbatim in the source · abstract, characters 483–612 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SA reversed the SD-induced reductions in grain yield and grain weight

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SAe4
Outcome
reductionse4
Direction
reversede4
Comparator
SDe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e1

“The results showed that the grain yield and grain weight significantly decreased under SD in Zhefu802, but not in its NIL variety”

✓ located verbatim in the source · abstract, characters 483–612 · show in text ↑
e4

“Interestingly, these reductions were reversed by SA”

✓ located verbatim in the source · abstract, characters 895–946 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

SD decreased expression of photosynthesis-related proteins in grains of Zhefu802

Taxon
rice (Oryza sativa L.)Oryza sativat0
Material
Zhefu802e2
Organ / stage
grainse2
Treatment
SDe2
Gene
photosynthesis-related proteinse2
Outcome
expression of photosynthesis-related proteinse2
Direction
decreasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e2

“SD also decreased expression of photosynthesis-related proteins in grains of Zhefu802, which resulted in its poorer drought resistance”

✓ located verbatim in the source · abstract, characters 614–748 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

A decreased grain filling rate, rather than grain size, explained the decreased grain weight and grain yield under SD

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SDe3
Outcome
grain filling ratee3
Direction
decreasede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e3

“Furthermore, the decreased grain filling rate rather than the grain size explained the observed decreased grain weight and grain yield under SD”

✓ located verbatim in the source · abstract, characters 750–893 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

SD down-regulated proteins of glycolysis/TCA cycle, starch and sucrose metabolism, and antioxidation and detoxication

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SDe5
Outcome
glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxicatione5
Direction
down-regulatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e5

“Expression of proteins involved in glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxication, oxidative phosphorylation, transcription, translation, and signal transduction, were significantly down-regulated under SD and were significantly up-regulated in response to SA”

✓ located verbatim in the source · abstract, characters 948–1245 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

SD down-regulated proteins of oxidative phosphorylation, transcription and translation

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SDe5
Outcome
oxidative phosphorylation, transcription, translatione5
Direction
down-regulatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e5

“Expression of proteins involved in glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxication, oxidative phosphorylation, transcription, translation, and signal transduction, were significantly down-regulated under SD and were significantly up-regulated in response to SA”

✓ located verbatim in the source · abstract, characters 948–1245 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

SD down-regulated proteins involved in signal transduction

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SDe5
Outcome
signal transductione5
Direction
down-regulatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e5

“Expression of proteins involved in glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxication, oxidative phosphorylation, transcription, translation, and signal transduction, were significantly down-regulated under SD and were significantly up-regulated in response to SA”

✓ located verbatim in the source · abstract, characters 948–1245 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

SA up-regulated proteins of glycolysis/TCA cycle, starch and sucrose metabolism, and antioxidation and detoxication relative to SD

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SAe5
Outcome
glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxicatione5
Direction
up-regulatede5
Comparator
SDe5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e5

“Expression of proteins involved in glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxication, oxidative phosphorylation, transcription, translation, and signal transduction, were significantly down-regulated under SD and were significantly up-regulated in response to SA”

✓ located verbatim in the source · abstract, characters 948–1245 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

SA up-regulated proteins of oxidative phosphorylation, transcription and translation relative to SD

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SAe5
Outcome
oxidative phosphorylation, transcription, translatione5
Direction
up-regulatede5
Comparator
SDe5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e5

“Expression of proteins involved in glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxication, oxidative phosphorylation, transcription, translation, and signal transduction, were significantly down-regulated under SD and were significantly up-regulated in response to SA”

✓ located verbatim in the source · abstract, characters 948–1245 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

SA up-regulated proteins involved in signal transduction relative to SD

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SAe5
Outcome
signal transductione5
Direction
up-regulatede5
Comparator
SDe5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e5

“Expression of proteins involved in glycolysis/TCA circle, starch and sucrose metabolism, antioxidation and detoxication, oxidative phosphorylation, transcription, translation, and signal transduction, were significantly down-regulated under SD and were significantly up-regulated in response to SA”

✓ located verbatim in the source · abstract, characters 948–1245 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Transcript-level examination of these proteins gave similar results

Taxon
rice (Oryza sativa L.)Oryza sativat0
Outcome
transcriptional levele6
Qualifier
similar results were obtainede6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e6

“The expression of these proteins was examined at transcriptional level and similar results were obtained”

✓ located verbatim in the source · abstract, characters 1247–1351 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Inhibited expression of these proteins and related pathways contributed to the decreased grain filling rate of Zhefu802

Taxon
rice (Oryza sativa L.)Oryza sativat0
Material
Zhefu802e7
Outcome
grain filling ratee7
Qualifier
Inhibited expression of these proteins and related pathwayse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e7

“Inhibited expression of these proteins and related pathways contributed to the observed decrease in the grain filling rate of Zhefu802, and application of SA up-regulated expression of these proteins to improve grain weight”

✓ located verbatim in the source · abstract, characters 1353–1576 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SA up-regulated expression of these proteins to improve grain weight

Taxon
rice (Oryza sativa L.)Oryza sativat0
Treatment
SAe7
Outcome
grain weighte7
Direction
improvee7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Proteomic analysis of salicylic acid regulation of grain filling of two near-isogenic rice (Oryza sativa L.) varieties under soil drying condition”

✓ located verbatim in the source · title, characters 0–146 · show in text ↑
e7

“Inhibited expression of these proteins and related pathways contributed to the observed decrease in the grain filling rate of Zhefu802, and application of SA up-regulated expression of these proteins to improve grain weight”

✓ located verbatim in the source · abstract, characters 1353–1576 · show in text ↑

salicylic acid · quality: sugar starch · Oryza sativa (rice)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive
See all 4 papers →

salicylic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

31 papers: 28 positive, 3 negative or no effect

27 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

27 papers more in this group

See all 31 papers →

salicylic acid · yield · Oryza sativa (rice)Results agree

49 papers: 49 positive, 0 negative or no effect

48 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

45 papers more in this group

See all 49 papers →

processing · molecular: expression · Oryza sativa (rice)Positive and negative results

11 papers: 9 positive, 2 negative or no effect

1 paper in the same direction as this paper · 9 in the opposite direction

  1. positive
  2. positive
  3. positive

7 papers more in this group

See all 11 papers →

processing · quality: sugar starch · Oryza sativa (rice)Positive and negative results

21 papers: 15 positive, 6 negative or no effect

5 papers in the same direction as this paper · 15 in the opposite direction

  1. positive
  2. positive
  3. positive

17 papers more in this group

See all 21 papers →

processing · yield · Oryza sativa (rice)Positive and negative results

114 papers: 88 positive, 26 negative or no effect

25 papers in the same direction as this paper · 88 in the opposite direction

  1. positive
  2. positive
  3. positive

110 papers more in this group

See all 114 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.