Paper · 2026 · PeerJ

Microbial allies: shaping growth, physiology, and rhizosphere dynamics of onion ( Allium cepa L.)

Pranjali A. Gedam; Kiran Khandagale; Vitthal T. Barvkar; et al.

12
claims
24
verbatim quotes
0
citations
3
research areas
✓
Open access · cc-by

Abstract

The present study investigates the dual impact of microbial biofertilizers on the phenotypic performance and rhizosphere microbiome composition in an onion crop. A pot experiment was conducted with seven treatments of microbial inoculants, such as Azotobacter, Azospirillum, Piriformospora indica , phosphate solubilizing bacteria (PSB), and control treatments with and without chemical fertilizers. The growth, physiological, and biochemical traits of onion were assessed alongside rhizospheric soil microbiome profiling using 16S rRNA metagenomic sequencing. Significant enhancement in plant height, leaf number, leaf area, chlorophyll content, photosynthetic rate, and antioxidant enzyme activity with low leaf temperature was observed in plants inoculated with Azotobacter and Azospirillum. Notably, the Azotobacter treatment yielded a significant enhancement in the bulb phenol content. Rhizosphere metagenomic analysis revealed 17 dominant phyla, with Actinobacteria (25.3%), Proteobacteria (22.2%), Firmicutes (12.8%), and Chloroflexi (11.02%) comprising over 70% of the total microbiome. Alpha and beta diversity metrics indicated that microbial inoculation, especially with Azospirillum and PSB, enriched the soil microbial community structure. Distinct clustering and correlations with specific microbial taxa such as Candidatus Nitrososphaera and Pseudomonas were observed in response to individual biofertilizer treatments. This study highlights the potential of biofertilizers not only in enhancing onion growth and development but also in modulating beneficial rhizosphere microbial communities. Integrating biofertilizers into onion production systems could reduce the dependency on chemical fertilizers and promote sustainable crop management.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Azotobacter increased onion height, leaf number, and leaf area.

Taxon
onionAllium cepat0
Treatment
inoculated with Azotobactere0
Interactor
AzotobacterAzotobactere0symbiont
Outcome
plant height, leaf number, leaf areae0
Direction
enhancemente0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azotobacter
Azotobacter · Interactor · picture of the genus (one of its species)DAN H. JONES · Public domain · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“Significant enhancement in plant height, leaf number, leaf area, chlorophyll content, photosynthetic rate, and antioxidant enzyme activity with low leaf temperature was observed in plants inoculated with Azotobacter and Azospirillum”

✓ located verbatim in the source · abstract, characters 561–793 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Azospirillum increased onion height, leaf number, and leaf area.

Taxon
onionAllium cepat0
Treatment
inoculated with Azotobacter and Azospirillume0
Interactor
AzospirillumAzospirillume0symbiont
Outcome
plant height, leaf number, leaf areae0
Direction
enhancemente0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azospirillum
Azospirillum · InteractorFadelblaid · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“Significant enhancement in plant height, leaf number, leaf area, chlorophyll content, photosynthetic rate, and antioxidant enzyme activity with low leaf temperature was observed in plants inoculated with Azotobacter and Azospirillum”

✓ located verbatim in the source · abstract, characters 561–793 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Azotobacter increased onion chlorophyll content, photosynthetic rate, and antioxidant enzyme activity.

Taxon
onionAllium cepat0
Treatment
inoculated with Azotobactere0
Interactor
AzotobacterAzotobactere0symbiont
Outcome
chlorophyll content, photosynthetic rate, and antioxidant enzyme activitye0
Direction
enhancemente0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azotobacter
Azotobacter · Interactor · picture of the genus (one of its species)DAN H. JONES · Public domain · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“Significant enhancement in plant height, leaf number, leaf area, chlorophyll content, photosynthetic rate, and antioxidant enzyme activity with low leaf temperature was observed in plants inoculated with Azotobacter and Azospirillum”

✓ located verbatim in the source · abstract, characters 561–793 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Azospirillum increased onion chlorophyll content, photosynthetic rate, and antioxidant enzyme activity.

Taxon
onionAllium cepat0
Treatment
inoculated with Azotobacter and Azospirillume0
Interactor
AzospirillumAzospirillume0symbiont
Outcome
chlorophyll content, photosynthetic rate, and antioxidant enzyme activitye0
Direction
enhancemente0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azospirillum
Azospirillum · InteractorFadelblaid · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“Significant enhancement in plant height, leaf number, leaf area, chlorophyll content, photosynthetic rate, and antioxidant enzyme activity with low leaf temperature was observed in plants inoculated with Azotobacter and Azospirillum”

✓ located verbatim in the source · abstract, characters 561–793 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Azotobacter inoculation lowered onion leaf temperature.

Taxon
onionAllium cepat0
Treatment
inoculated with Azotobactere0
Interactor
AzotobacterAzotobactere0symbiont
Outcome
leaf temperaturee0
Direction
lowe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azotobacter
Azotobacter · Interactor · picture of the genus (one of its species)DAN H. JONES · Public domain · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“low leaf temperature was observed in plants inoculated with Azotobacter and Azospirillum”

✓ located verbatim in the source · abstract, characters 705–793 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Azospirillum inoculation lowered onion leaf temperature.

Taxon
onionAllium cepat0
Treatment
inoculated with Azotobacter and Azospirillume0
Interactor
AzospirillumAzospirillume0symbiont
Outcome
leaf temperaturee0
Direction
lowe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azospirillum
Azospirillum · InteractorFadelblaid · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“low leaf temperature was observed in plants inoculated with Azotobacter and Azospirillum”

✓ located verbatim in the source · abstract, characters 705–793 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Azotobacter significantly enhanced onion bulb phenol content.

Taxon
onionAllium cepat0
Treatment
Azotobacter treatmente0
Interactor
AzotobacterAzotobactere0symbiont
Outcome
bulb phenol contente0
Direction
enhancemente0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azotobacter
Azotobacter · Interactor · picture of the genus (one of its species)DAN H. JONES · Public domain · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“the Azotobacter treatment yielded a significant enhancement in the bulb phenol content”

✓ located verbatim in the source · abstract, characters 804–890 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Four phyla together comprised over 70% of the onion rhizosphere microbiome.

Taxon
onionAllium cepat0
Outcome
total microbiomee0
Value
over 70%e0
Qualifier
Actinobacteria (25.3%), Proteobacteria (22.2%), Firmicutes (12.8%), and Chloroflexi (11.02%)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“17 dominant phyla, with Actinobacteria (25.3%), Proteobacteria (22.2%), Firmicutes (12.8%), and Chloroflexi (11.02%) comprising over 70% of the total microbiome”

✓ located verbatim in the source · abstract, characters 934–1094 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Azospirillum inoculation enriched onion rhizosphere microbial community structure.

Taxon
onionAllium cepat0
Treatment
microbial inoculation, especially with Azospirillume0
Interactor
AzospirillumAzospirillume0symbiont
Outcome
soil microbial community structuree0
Direction
enrichede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Azospirillum
Azospirillum · InteractorFadelblaid · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“microbial inoculation, especially with Azospirillum and PSB, enriched the soil microbial community structure”

✓ located verbatim in the source · abstract, characters 1144–1252 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

PSB inoculation enriched onion rhizosphere microbial community structure.

Taxon
onionAllium cepat0
Treatment
microbial inoculation, especially with Azospirillum and PSBe0
Interactor
PSBe0symbiont
Outcome
soil microbial community structuree0
Direction
enrichede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“microbial inoculation, especially with Azospirillum and PSB, enriched the soil microbial community structure”

✓ located verbatim in the source · abstract, characters 1144–1252 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Individual biofertilizer treatments produced distinct microbial clustering and correlations with Candidatus Nitrososphaera and Pseudomonas.

Taxon
onionAllium cepat0
Treatment
individual biofertilizer treatmentse0
Interactor
Candidatus NitrososphaeraNitrososphaerae0symbiont
Second interactor
PseudomonasPseudomonase0symbiont
Outcome
Distinct clustering and correlationse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗
Nitrososphaera
Nitrososphaera · Interactor · picture of the genus (one of its species)Michaela Stieglmeier, Andreas Klingl, Ricardo J. E. Alves, Simon K.-M. R. Rittmann, Michael Melcher, Nikolaus Leisch, Christa Schleper · CC BY 3.0 · Wikimedia Commons ↗
Pseudomonas
Pseudomonas · Second interactor · picture of the genus (one of its species)CDC · Public domain · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“Distinct clustering and correlations with specific microbial taxa such as Candidatus Nitrososphaera and Pseudomonas were observed in response to individual biofertilizer treatments”

✓ located verbatim in the source · abstract, characters 1254–1434 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors propose integrating biofertilizers into onion production to reduce reliance on chemical fertilizers.

Taxon
onionAllium cepat0
Outcome
Integrating biofertilizers into onion production systems could reduce the dependency on chemical fertilizers and promote sustainable crop managemente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Allium cepa
Allium cepa · TaxonMehdi · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“onion ( Allium cepa L.)”

✓ located verbatim in the source · title, characters 74–97 · show in text ↑
e0

“Integrating biofertilizers into onion production systems could reduce the dependency on chemical fertilizers and promote sustainable crop management”

✓ located verbatim in the source · abstract, characters 1610–1758 · show in text ↑

Azotobacter · soil: biology · Allium cepa (onion)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Azotobacter · growth · Allium cepa (onion)Results agree

14 papers: 14 positive, 0 negative or no effect

13 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

10 papers more in this group

See all 14 papers →

Azospirillum · growth · Allium cepa (onion)Results agree

15 papers: 15 positive, 0 negative or no effect

14 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

11 papers more in this group

See all 15 papers →

inoculation · growth · Allium cepa (onion)Results differ

99 papers: 89 positive, 10 negative or no effect

88 papers in the same direction as this paper · 10 in the opposite direction

  1. positive
  2. no effect
  3. negative

95 papers more in this group

See all 99 papers →

inoculation · soil: physics · Allium cepa (onion)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

inoculation · soil: biology · Allium cepa (onion)Results agree

7 papers: 7 positive, 0 negative or no effect

6 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

3 papers more in this group

See all 7 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.