Search claims · PlantClaims

Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

30 lncRNAs have potential to simultaneously cis- and trans-regulate salt-responsive homologous genes.

Taxon: Populus trichocarpaPopulus trichocarpae0
Outcome: salt-responsive homologous genese4
Value: 30e4

Verbatim

e0
“Using 27 RNA-seq data sets from Populus trichocarpa leaves, stems and roots, we identified 2988 high-confidence lncRNAs, including 1183 salt-induced differentially expressed lncRNAs”
✓ located verbatim in the source · abstract, characters 216–397

e4
“we found 30 lncRNAs that have potential to simultaneously cis- and trans-regulate salt-responsive homologous genes”
✓ located verbatim in the source · abstract, characters 913–1027

Title

Role of lncRNAs in cis‐ and trans‐regulatory responses to salt in Populus trichocarpa

Xiaoxue Ye; Shuo Wang; Xijuan Zhao; et al. The Plant Journal 2022. doi:10.1111/tpj.15714

Other claims from this paper (9)

Observationobservedoriginal resultmeasured

Claim · model-written summary

The candidate RjWRKY genes are responsive to methyl jasmonate.

Taxon: Reynoutria japonicaReynoutria japonicat0
Treatment: methyl jasmonatee0
Outcome: simultaneously responsivee0

Verbatim

t0
“Reynoutria japonica”
✓ located verbatim in the source · title, characters 94–113

e0
“are simultaneously responsive to methyl jasmonate (MeJA, a stress-response ‘messenger’) and ultraviolet (UV) radiation”
✓ located verbatim in the source · abstract, characters 1134–1252

Title

Genome-wide identification and functional analysis of the WRKY transcription factor family in Reynoutria japonica reveals its role in balancing growth and abiotic stress tolerance

Fan-Hong Wang; Jia-Ying Wang; Ning-Ning Yang; et al. BMC Plant Biology 2026. doi:10.1186/s12870-026-08480-3

Other claims from this paper (11)

Observationobservedoriginal resultmeasured

Claim · model-written summary

The candidate RjWRKY genes are responsive to ultraviolet radiation.

Taxon: Reynoutria japonicaReynoutria japonicat0
Treatment: ultraviolet (UV) radiatione0
Outcome: simultaneously responsivee0

Verbatim

t0
“Reynoutria japonica”
✓ located verbatim in the source · title, characters 94–113

e0
“are simultaneously responsive to methyl jasmonate (MeJA, a stress-response ‘messenger’) and ultraviolet (UV) radiation”
✓ located verbatim in the source · abstract, characters 1134–1252

Title

Genome-wide identification and functional analysis of the WRKY transcription factor family in Reynoutria japonica reveals its role in balancing growth and abiotic stress tolerance

Fan-Hong Wang; Jia-Ying Wang; Ning-Ning Yang; et al. BMC Plant Biology 2026. doi:10.1186/s12870-026-08480-3

Other claims from this paper (11)

Associationobservedoriginal resultmeasured

Claim · model-written summary

Some BnaBBXs responded to multiple nutrient stresses.

Treatment: diverse nutrient stressese0
Outcome: simultaneously responsivee0

Not reportedTaxonGeneDirection

Verbatim

e0
“some of them were simultaneously responsive to diverse nutrient stresses”
✓ located verbatim in the source · abstract, characters 1464–1536

t0
“rapeseed”
✓ located verbatim in the source · title, characters 168–176

Title

Genome-wide identification of Brassicaceae B-BOX genes and molecular characterization of their transcriptional responses to various nutrient stresses in allotetraploid rapeseed

Li-wei Zheng; Sheng-jie Ma; Ting Zhou; et al. BMC Plant Biology 2021. doi:10.1186/s12870-021-03043-0

Other claims from this paper (6)

Method / resourceobservedoriginal resultpositivesimulated

Claim · model-written summary

Combined MYC2 activation and ATAF1 inhibition performed better than single-node interventions.

Taxon: ArabidopsisArabidopsise1
Treatment: simultaneously activating MYC2 and inhibiting ATAF1e0
Outcome: drought-responsive reporter genese2
Direction: bettere0
Comparator: best single node intervention strategiese2

Verbatim

e0
“simultaneously activating MYC2 and inhibiting ATAF1 is a better strategy”
✓ located verbatim in the source · abstract, characters 1068–1140

e1
“drought signaling pathways in Arabidopsis”
✓ located verbatim in the source · abstract, characters 355–396

e2
“best single node intervention strategies to regulate the drought-responsive reporter genes”
✓ located verbatim in the source · abstract, characters 951–1041

Title

Detecting drought regulators using stochastic inference in Bayesian networks

Aditya Lahiri; Lin Zhou; Ping He; et al. PLoS ONE 2021. doi:10.1371/journal.pone.0255486

Other claims from this paper (4)

Method / resource Simulated MYC2 activation was among the best single-node interventions for drought-responsive reporter genes.
Method / resource Simulated ATAF1 inhibition was among the best single-node interventions for drought-responsive reporter genes.
Method / resource The Bayesian model identified MYC2 and ATAF1 as possible drought response regulators.
Mechanism Validation experiments found ATAF1 negatively regulated drought response.

Observationauthor interpretationreview summarymixedbasis n/a

Claim · model-written summary

Semi-dwarf fertilizer-responsive cultivars raised yield potential while increasing reliance on external nitrogen and limiting intrinsic nitrogen use efficiency.

Taxon: cultivarse0
Material: semi-dwarf, fertilizer-responsive cultivarse0
Outcome: high yield potentiale0
Direction: highe0

Verbatim

e0
“semi-dwarf, fertilizer-responsive cultivars contributed to high yield potential while simultaneously reinforcing dependence on external nitrogen inputs and constraining intrinsic NUE”
✓ located verbatim in the source · abstract, characters 840–1022

Title

Molecular Tweaking of Nitrogen Use Efficiency: Key to Sustainable Agriculture

Nikitha Ramesh; A. G. Kiran; S. Bharathmithran Annual Research & Review in Biology 2026. doi:10.9734/arrb/2026/v41i42388

Other claims from this paper (3)

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

BnaA9.HHO1 and BnaA1.HHO5 were transcriptionally responsive to nutrient stresses in both shoots and roots.

Taxon: rapeseede0
Organ / stage: hoots and rootse1
Treatment: nutrient stressese1
Gene: BnaA9.HHO1 and BnaA1.HHO5e1
Outcome: transcriptionally responsivee1

Not reportedComparatorDirection

Verbatim

e0
“allotetraploid rapeseed (Brassica napus L.)”
✓ located verbatim in the source · abstract, characters 208–251

e1
“Notably, BnaA9.HHO1 and BnaA1.HHO5 were simultaneously transcriptionally responsive to these nutrient stresses in both hoots and roots”
✓ located verbatim in the source · abstract, characters 1170–1304

Title

Genome-Scale Investigation of GARP Family Genes Reveals Their Pivotal Roles in Nutrient Stress Resistance in Allotetraploid Rapeseed

Ying-Peng Hua; Peng-Jia Wu; Tian-Yu Zhang; et al. International Journal of Molecular Sciences 2022. doi:10.3390/ijms232214484

Other claims from this paper (13)

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Heat shock proteins, late embryogenesis abundant proteins and photosynthesis-related proteins were consistently responsive to stress in both genotypes.

Taxon: RiceOryza sativat0
Material: Nipponbaree7
Treatment: stresse7
Outcome: Heat shock proteins, late embryogenesis abundant proteins and photosynthesis-related proteinse7
Qualifier: consistently responsivee7

Not reportedComparatorDirection

Verbatim

t0
“Two Contrasting Rice Cultivars”
✓ located verbatim in the source · title, characters 78–108

e7
“Heat shock proteins, late embryogenesis abundant proteins and photosynthesis-related proteins were consistently responsive to stress in both Nipponbare and IAC1131”
✓ located verbatim in the source · abstract, characters 1044–1207

Title

Multiple Abiotic Stresses Applied Simultaneously Elicit Distinct Responses in Two Contrasting Rice Cultivars

Fatemeh Habibpourmehraban; Yunqi Wu; Jemma X. Wu; et al. International Journal of Molecular Sciences 2022. doi:10.3390/ijms23031739

Other claims from this paper (7)

Intervention effect Stomata closed in rice after two days of combined stresses.
Intervention effect Intercellular CO2 concentrations and assimilation rates diminished rapidly in rice under combined stresses.
Intervention effect Abscisic acid levels in rice increased at least five-fold under combined drought, salt and temperature treatments.
Association Abscisic acid levels did not differ significantly between Nipponbare and IAC1131 under stress.
Observation Tandem Mass Tag proteomics identified 6215 proteins in mature rice leaves across two genotypes and three time points.
Intervention effect 987 rice leaf proteins were differentially expressed due to stress compared with control plants.
Intervention effect After two days of stress, almost six times fewer proteins were differentially expressed in IAC1131 than in Nipponbare.

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

High light inhibits expression of light signal-responsive genes.

Taxon: Pinellia ternataPinellia ternatat0
Treatment: high lighte0
Gene: PIF4 , CCA1 , and PHYAe0
Outcome: expression of light signal-responsive genese0
Direction: inhibitse0

Not reportedComparator

Verbatim

t0
“Pinellia ternata”
✓ located verbatim in the source · title, characters 119–135

e0
“Simultaneously, high light inhibits the expression of light signal-responsive genes (e.g., PIF4 , CCA1 , and PHYA ) and upregulates genes involved in phototropism ( PHOT2 ) and chlorophyll biosynthesis (e.g., GluTR , GSAM , UROD , COPRO genⅢ-Ox ).”
✓ located verbatim in the source · abstract, characters 1017–1264

Title

Metabolomic and transcriptomic analysis reveals high light to promote tuber enlargement through starch accumulation in Pinellia ternata

Duan Wu; Qin Chang; Minting Lu; et al. Current Plant Biology 2025. doi:10.1016/j.cpb.2025.100529

Other claims from this paper (16)

Intervention effect High light inhibits growth.
Intervention effect High light inhibits chlorophyll accumulation.
Intervention effect High light activates photoprotective system.
Intervention effect High light promoting tuber enlargement.
Intervention effect High light increasing starch accumulation by 24.92% in tubers.
Observation 210 DAMs in tubers were enriched in photosynthesis, hormone signaling and starch metabolism pathways.
Observation 1,459 DEGs in tubers were enriched in photosynthesis, hormone signaling and starch metabolism pathways.
Intervention effect High light promoted expression of genes involved in stress-responsive hormone synthesis in leaves.
Intervention effect High light promoted expression of stress response factors mTERF and GNAT in leaves.
Intervention effect High light reduced accumulation of these hormones in tubers.
Intervention effect High light upregulates genes involved in phototropism.
Intervention effect High light upregulates chlorophyll biosynthesis.
Intervention effect High light activated expression of genes encoding sugar transporters.
Intervention effect High light activated genes related to starch and sucrose synthases.
Mechanism High light facilitated conversion of fructose and glucose into starch and promoted tuber swelling.
Mechanism The authors propose that high-light photoprotection and energy conversion promote sugar handling and tuber growth.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Under combined drought and viral stress, the drought-responsive gene RD29A was downregulated.

Taxon: ArabidopsisArabidopsise2
Treatment: drought and viral stressese6
Interactor: TuMVTurnip mosaic viruse2pathogen
Gene: RD29Ae6
Outcome: drought-responsive genee6
Direction: downregulatione6

Not reportedComparator

Verbatim

e2
“We studied the outcome of TuMV infection on stomatal closure and water balance, hormonal balance and drought tolerance in Arabidopsis”
✓ located verbatim in the source · abstract, characters 255–388

e6
“Notwithstanding lower relative water loss during infection, plants simultaneously subjected to drought and viral stresses showed higher mortality rates than mock-inoculated drought stressed controls, alongside downregulation of drought-responsive gene RD29A”
✓ located verbatim in the source · abstract, characters 1055–1312

Title

TuMV triggers stomatal closure but reduces drought tolerance in Arabidopsis

Carlos Augusto Manacorda; Gustavo Gudesblat; Moira Sutka; et al. Plant Cell & Environment 2021. doi:10.1111/pce.14024

Other claims from this paper (11)

Intervention effect TuMV infection reduced stomatal aperture in Arabidopsis.
Intervention effect TuMV infection diminished gas exchange rate, daily water consumption and rosette initial dehydration rate in Arabidopsis.
Intervention effect TuMV-infected Arabidopsis overaccumulated salicylic acid and abscisic acid.
Intervention effect TuMV infection altered expression levels of key ABA homeostasis genes in Arabidopsis.
Intervention effect TuMV infection induced expression of the ABA signalling gene ABI2.
Intervention effect TuMV infection highly induced expression of ABCG40 in Arabidopsis.
Intervention effect The abi2-1 mutant abolished both TuMV-induced stomatal closure and low stomatal conductance.
Intervention effect ABA or SA biosynthetic, signalling or degradation mutants other than abi2-1 did not abolish the TuMV-induced stomatal phenotypes.
Intervention effect TuMV infection lowered relative water loss in Arabidopsis.
Intervention effect Plants under combined drought and viral stress had higher mortality than mock-inoculated drought-stressed controls.
Intervention effect TuMV infection diminishes drought tolerance in Arabidopsis, despite the stomatal closure it triggers.

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