View: List Claim type Research area Organism Taxon as written Decade Paper Taxon groups are the verbatim names found in the abstracts (case-insensitive), not normalised: maize, corn and Zea mays are separate groups here. The Organism view merges them through NCBI Taxonomy.
Mechanism hypothesis original result basis n/a Claim · model-written summary
The MtCAS31 and AtICE1 in teraction is hypothesized to cause the decrease in stomatal density that enhances drought resistance in transgenic Arabidopsis .
decrease in stomatal density e6 the interaction of MtCAS31 and AtICE1 e6 Verbatim
e6 “We hypothesize that the in teraction of MtCAS31 and AtICE1 caused the decrease in stomatal density to enhance the drought resistance of transgenic Arabidopsis ”
✓ located verbatim in the source · abstract, characters 1421–1578 Other claims from this paper (4) Observation observed original result no effect measured Claim · model-written summary
SEC3A puncta density did not decrease after these cells stopped growing.
density of puncta e0 does not decrease e0 after growth termination e0 Verbatim
t0 “Arabidopsis
✓ located verbatim in the source · title, characters 4–15 e0 “The density of puncta does not decrease after growth termination of these cells, but decrease s strongly when exocytosis is in hibited by treatment with brefeldin A. ”
✓ located verbatim in the source · abstract, characters 935–1098 Other claims from this paper (7) Intervention effect observed original result significant (as stated) measured Claim · model-written summary
OsYDA1 overexpression significantly decrease d stomatal density in Arabidopsis .
Overexpression e0 stomatal density e0 Not reported Comparator
Verbatim
e0 “Overexpression of either of these genes in Arabidopsis resulted in a significant decrease in stomatal density and water-loss rate. ”
✓ located verbatim in the source · abstract, characters 555–685 e1 “OsYDA1 and OsYDA2 ”
✓ located verbatim in the source · abstract, characters 537–554 Other claims from this paper (6)
not stated 4 Mechanism author interpretation original result measured Claim · model-written summary
The authors linked the density in duced ratio decrease to downregulation of three carbon metabolism enzymes.
downregulation of C 4 carbon metabolism enzymes e0 C 4 carbon metabolism enzymes e0 Not reported Taxon
Verbatim
e0 “which resulted in downregulation of C 4 carbon metabolism enzymes (phosphoenolpyruvate carboxykinase, phosphoenolpyruvate carboxylase, and pyruvate orthophosphate dikinase). ”
✓ located verbatim in the source · abstract, characters 1189–1362 Other claims from this paper (12) Observation observed original result negative measured Claim · model-written summary
The gem mutant had reduced root hair density and length.
root hair density and length e0 Not reported Taxon
Verbatim
e0 “By contrast, gem mutant plants displayed a decrease in root hair density and length with reduced expression of RHD6, AXR2, AUX1, AXR1, ETR1, CTR1, and EIN2. ”
✓ located verbatim in the source · abstract, characters 1106–1262 Other claims from this paper (9) Method / resource observed original result positive measured Claim · model-written summary
In tegrating GRAS-Di and GoldenGate SNP markers decrease d average genetic distance between markers in all four rice RIL populations.
average genetic distance between markers e0 Not reported Comparator
Verbatim
e0 “the average genetic distance between markers showed a clear decrease in the four RIL populations when we in tegrated markers of both linkage maps ”
✓ located verbatim in the source · abstract, characters 1338–1482 Other claims from this paper (9) Intervention effect observed original result measured Claim · model-written summary
Decreasing plant density changed the photosynthetic efficiency of apple leaves and the expression of photosynthesis-related genes.
decrease of plant density e0 photosynthetic efficiency of leaves and the expression of photosynthesis-related genes e0 Not reported Comparator
Verbatim
e0 “the decrease of plant density changed the photosynthetic efficiency of leaves and the expression of photosynthesis-related genes ”
✓ located verbatim in the source · abstract, characters 1685–1813 t0 “apple ”
✓ located verbatim in the source · title, characters 65–70 Other claims from this paper (12) Intervention effect Chlorophyll content was apparently higher in low-density (LD) apple than in the high-density (HD) control. Intervention effect The contents of ACC, RUBP and PEP were apparently higher in low-density (LD) apple than in the high-density (HD) control. Intervention effect The contents of PPO and AO were noticeably lower in low-density (LD) apple than in high-density (HD) apple. Observation 3808 differentially expressed genes were detected between high-density and low-density apple trees. Observation 1935 DEGs were found in the middle-upper comparison between HD and LD. Observation 2390 DEGs were found in the lower-outer comparison between HD and LD. Observation 1108 DEGs were found in the lower-inner comparison between HD and LD. Observation 274 common differentially expressed genes (co-DEGs) were contained in all three comparisons. Observation Functional enrichment and KEGG analysis found the co-DEGs involved in carbon fixation, circadian rhythm, photosynthesis antenna proteins, photosynthesis, chlorophyll metabolism, porphyrin and sugar metabolism. Mechanism The LHCB gene family participated in photosynthesis as parts of photosystem II. Mechanism SPA1, rbcL, SNRK2, MYC2, BSK, SAUR and PP2C are involved in circadian rhythm. Observation The expression of genes related to glycometabolism and hormone signaling pathways was also changed. Intervention effect observed original result positive measured Claim · model-written summary
MsDREB6.2 overexpression decrease d stomatal aperture and density .
Overexpression of Ms DREB 6.2 e0 stomatal aperture and density e0 Not reported Comparator
Verbatim
e0 “Overexpression of Ms DREB 6.2 resulted in a decrease in stomatal aperture and density ”
✓ located verbatim in the source · abstract, characters 932–1017 t0 “Overexpression of MsDREB6.2 results in cytokinin‐deficient developmental phenotypes and enhances drought tolerance in transgenic apple plants ”
✓ located verbatim in the source · title, characters 0–141 Other claims from this paper (8) Intervention effect observed original result positive measured Claim · model-written summary
MsDREB6.2 overexpression in creased root hydraulic conductance.
Overexpression of Ms DREB 6.2 e0 root hydraulic conductance (L 0 ) e0 Not reported Comparator
Verbatim
e0 “Overexpression of Ms DREB 6.2 resulted in a decrease in stomatal aperture and density and an in crease in root hydraulic conductance (L 0 ) ”
✓ located verbatim in the source · abstract, characters 932–1070 t0 “Overexpression of MsDREB6.2 results in cytokinin‐deficient developmental phenotypes and enhances drought tolerance in transgenic apple plants ”
✓ located verbatim in the source · title, characters 0–141 Other claims from this paper (8) Observation observed original result measured Claim · model-written summary
Lineage-specific alleles that decrease trichome density persist in natural populations.
lineage-specific alleles e0 trichome density e0 Verbatim
e0 “many lineage-specific alleles that either in crease or decrease trichome density persist in natural populations ”
✓ located verbatim in the source · abstract, characters 1046–1156 t0 “Arabidopsis thaliana
✓ located verbatim in the source · title, characters 59–79 Other claims from this paper (5) Association observed original result measured Claim · model-written summary
TE abundance shows a consistent negative correlation with gene density in A. thaliana .
decrease inferred e2 Verbatim
e0 “the genome sequence of Arabidopsis thaliana ”
✓ located verbatim in the source · abstract, characters 334–377 e2 “a consistent negative correlation between gene density and TE abundance ”
✓ located verbatim in the source · abstract, characters 711–782 Other claims from this paper (4) Observation observed original result measured Claim · model-written summary
Lineage-specific alleles that in crease trichome density persist in natural populations.
lineage-specific alleles e0 trichome density e0 Verbatim
e0 “many lineage-specific alleles that either in crease or decrease trichome density persist in natural populations ”
✓ located verbatim in the source · abstract, characters 1046–1156 t0 “Arabidopsis thaliana
✓ located verbatim in the source · title, characters 59–79 Other claims from this paper (5) Intervention effect observed original result measured Claim · model-written summary
CRISPR/Cas9 knockout of STOMAGEN in rice yielded lines with about 25% of wild-type stomatal density .
CRISPR/Cas9-mediated knockouts e1 stomatal density e1 decrease inferred e1 Verbatim
e1 “CRISPR/Cas9-mediated knockouts of the positive regulator of stomatal development STOMAGEN and its paralog EPIDERMAL PATTERNING FACTOR-LIKE10 (EPFL10) yielded lines with ∼25% and 80% of wild-type stomatal density , respectively ”
✓ located verbatim in the source · abstract, characters 361–586 t0 “rice ”
✓ located verbatim in the source · title, characters 22–26 Other claims from this paper (5) Intervention effect observed original result measured Claim · model-written summary
CRISPR/Cas9 knockout of EPFL10 in rice yielded lines with about 80% of wild-type stomatal density .
CRISPR/Cas9-mediated knockouts e1 stomatal density e1 decrease inferred e1 Verbatim
e1 “CRISPR/Cas9-mediated knockouts of the positive regulator of stomatal development STOMAGEN and its paralog EPIDERMAL PATTERNING FACTOR-LIKE10 (EPFL10) yielded lines with ∼25% and 80% of wild-type stomatal density , respectively ”
✓ located verbatim in the source · abstract, characters 361–586 t0 “rice ”
✓ located verbatim in the source · title, characters 22–26 Other claims from this paper (5) Method / resource observed original result positive measured Claim · model-written summary
In tegrating GRAS-Di and GoldenGate markers decrease d average in termarker genetic distance in four RIL populations.
average genetic distance between markers e0 both linkage maps e0 Verbatim
e0 “the average genetic distance between markers showed a clear decrease in the four RIL populations when we in tegrated markers of both linkage maps. ”
✓ located verbatim in the source · abstract, characters 1338–1483 t0 “Japanese Rice japonica Recombinant In bred Lines ”
✓ located verbatim in the source · title, characters 31–78 Other claims from this paper (11) Method / resource observed original result measured Claim · model-written summary
Scaffold ordering with two high- density genetic maps in creased faba bean chromosome length to 14.28 Mbp
Verbatim
t0 “faba bean ”
✓ located verbatim in the source · title, characters 13–22 e1 “Two high- density genetic maps were used to conduct the scaffold ordering and orientation of faba bean, culminating in an in creased length (i.e., 14.28 Mbp) of chromosomes and a decrease in the number of scaffolds by 45 ”
✓ located verbatim in the source · abstract, characters 223–441 Other claims from this paper (9) Method / resource Scaffold ordering decreased the number of faba bean scaffolds by 45 Method / resource PacBio and Illumina RNA-seq datasets from 37 samples allowed identification and correction of 121,606 transcripts Method / resource RNA-seq data predicted 15,640 alternative splicing events in faba bean Method / resource RNA-seq data predicted 2,148 lncRNAs in faba bean Method / resource RNA-seq data predicted 1,752 fusion transcripts in faba bean Method / resource Compared with the reference genome, 38,850 new faba bean genes were identified Method / resource Compared with the reference genome, 56,188 new faba bean transcripts were identified Method / resource The integrated faba bean transcriptome sequence contains 103,267 transcripts Method / resource The integrated faba bean transcriptome is derived from 54,753 uni-genes Method / resource observed original result measured Claim · model-written summary
Scaffold ordering decrease d the number of faba bean scaffolds by 45
number of scaffolds e1 Verbatim
t0 “faba bean ”
✓ located verbatim in the source · title, characters 13–22 e1 “Two high- density genetic maps were used to conduct the scaffold ordering and orientation of faba bean, culminating in an in creased length (i.e., 14.28 Mbp) of chromosomes and a decrease in the number of scaffolds by 45 ”
✓ located verbatim in the source · abstract, characters 223–441 Other claims from this paper (9) Method / resource Scaffold ordering with two high-density genetic maps increased faba bean chromosome length to 14.28 Mbp Method / resource PacBio and Illumina RNA-seq datasets from 37 samples allowed identification and correction of 121,606 transcripts Method / resource RNA-seq data predicted 15,640 alternative splicing events in faba bean Method / resource RNA-seq data predicted 2,148 lncRNAs in faba bean Method / resource RNA-seq data predicted 1,752 fusion transcripts in faba bean Method / resource Compared with the reference genome, 38,850 new faba bean genes were identified Method / resource Compared with the reference genome, 56,188 new faba bean transcripts were identified Method / resource The integrated faba bean transcriptome sequence contains 103,267 transcripts Method / resource The integrated faba bean transcriptome is derived from 54,753 uni-genes Method / resource observed original result positive measured Claim · model-written summary
Enrichment decrease d potato host genomic reads by about 1.7-fold.
host genomic reads e0 DNA extracted from the same sample without density gradient centrifugation enrichment e0 Verbatim
e0 “a ∼1.7-fold decrease in host genomic reads compared to the DNA extracted from the same sample without density gradient centrifugation enrichment. ”
✓ located verbatim in the source · abstract, characters 563–708 e1 “potato in fected with a ‘ Candidatus Phytoplasma australasia’-related strain ”
✓ located verbatim in the source · abstract, characters 429–504 Other claims from this paper (9) Recommendation author interpretation original result positive basis n/a Claim · model-written summary
The authors recommend in trogressing both QTL in to potato cultivars to reduce nematode density and resistance breakdown.
introgress together GpaV(s)spl and GpaXI(s)spl into potato cultivars e0 Verbatim
e0 “in trogress together GpaV(s)spl and GpaXI(s)spl in to potato cultivars, in order to reduce the density of this quarantine pest in soil and to decrease the risk of selecting overcoming G. pallida subpopulations ”
✓ located verbatim in the source · abstract, characters 1122–1329 Other claims from this paper (8) Association observed original result negative measured Claim · model-written summary
CAB transcripts decrease d in abundance during grapevine leaf senescence.
leaf senescence e3 chlorophyll a/b binding (CAB) genes e2 Verbatim
e0 “Vitis vinifera 'Pinot noir' leaves 7, 88 and 131 days-old
✓ located verbatim in the source · abstract, characters 534–591 e1 “While CAB transcripts decrease in their abundance, cysteine-proteinases are activated ”
✓ located verbatim in the source · abstract, characters 853–938 e2 “chlorophyll a/b binding (CAB) genes and the cysteine-proteinases genes ”
✓ located verbatim in the source · abstract, characters 781–851 e3 “At this stage of leaf senescence ”
✓ located verbatim in the source · abstract, characters 702–734 Other claims from this paper (2) Association observed original result negative measured Claim · model-written summary
Cysteine-proteinase genes were activated during grapevine leaf senescence.
leaf senescence e3 cysteine-proteinases genes e2 cysteine-proteinases e1 Verbatim
e0 “Vitis vinifera 'Pinot noir' leaves 7, 88 and 131 days-old
✓ located verbatim in the source · abstract, characters 534–591 e1 “While CAB transcripts decrease in their abundance, cysteine-proteinases are activated ”
✓ located verbatim in the source · abstract, characters 853–938 e2 “chlorophyll a/b binding (CAB) genes and the cysteine-proteinases genes ”
✓ located verbatim in the source · abstract, characters 781–851 e3 “At this stage of leaf senescence ”
✓ located verbatim in the source · abstract, characters 702–734 Other claims from this paper (2) Intervention effect observed original result positive measured Claim · model-written summary
PtaEPF1 overexpression decrease d stomatal density in Arabidopsis and poplar.
PtaEPF1 was overexpressed e0 stomatal density e0 Not reported Comparator
Verbatim
e0 “PtaEPF1 was overexpressed in Arabidopsis and poplar and the resulting data in dicated that both genes are able to decrease stomatal density ”
✓ located verbatim in the source · abstract, characters 1395–1533 Other claims from this paper (5) Observation observed original result measured Claim · model-written summary
Several candidate genes potentially related to multiple-spikelet degeneration, single-floret spikelet in crease and reduced seed set were identified in the mapped region.
multiple-spikelet degeneration, single-floret spikelet increase and seed set rate decrease e0 may be responsible e0 Verbatim
e0 “Several candidate genes that may be responsible for barley multiple-spikelet degeneration, single-floret spikelet in crease and seed set rate decrease were identified in the region. ”
✓ located verbatim in the source · abstract, characters 1080–1260 Other claims from this paper (4) Lexical search (BM25). All words must match; if nothing does, any word. Organism names also match every spelling of the same organism. No semantic search yet.
Arabidopsise6
Malus domestica
Oryza sativa
Vicia faba
Solanum tuberosum
Globodera pallida
Vitis vinifera
Populus.jpg?width=60){kind=small}
Hordeum vulgare