Paper · 2026 · Plant Physiology and Biochemistry

Transcriptomic analysis of response to high-temperature stress in cotton

Xin Wang; Changwei Ge; Shaodong Liu; et al.

20
claims
40
verbatim quotes
0
citations
4
research areas
✓
Open access · cc-by-nc-nd

Abstract

High temperature stress (HT) is a major abiotic factor limiting global crop production. Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress, yet the underlying molecular mechanisms remain poorly understood. Here, we integrated physiological, transcriptomic, and functional analyses to elucidate the response of cotton material ZhongMianSuo087 (ZMS087) to HT. Field-based assays revealed that heat stress compromised cotton productivity by impairing pollen viability, reducing chlorophyll biosynthesis and leaf area, and altering biomass partitioning, leading to significant yield losses. Controlled-environment experiments demonstrated that heat stress disrupted oxidative homeostasis and photosynthetic capacity, as evidenced by increased lipid peroxidation and osmoregulatory accumulation, reduced antioxidant enzyme activities, and decreased chlorophyll content. Transcriptome sequencing identified 5211 differentially expressed genes, with significant activation of the raffinose metabolic process. GhRS2 and GhGOLS1 emerged as key upregulated genes, corresponding with increased raffinose content. Functional validation via virus-induced gene silencing demonstrated that silencing either gene compromised thermotolerance by reducing raffinose accumulation, impairing antioxidant enzyme activities, and exacerbating oxidative damage. Furthermore, exogenous application of raffinose (20-200 mg/L) alleviated heat-induced damage by improving leaf water status, enhancing survival rates, and promoting biomass accumulation. Collectively, This study provides species-specific functional evidence in cotton that the GhRS2/GhGOLS1-mediated raffinose biosynthesis pathway positively regulates thermotolerance, and reveals a mechanistic link between raffinose metabolism and antioxidant responses under heat stress.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 20

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress reduced chlorophyll biosynthesis and leaf area of cotton in field assays.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
heat stresse1
Outcome
chlorophyll biosynthesis and leaf areae1
Direction
reducinge1
Setting
Field-based assayse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e1

“Field-based assays revealed that heat stress compromised cotton productivity by impairing pollen viability, reducing chlorophyll biosynthesis and leaf area, and altering biomass partitioning, leading to significant yield losses”

✓ located verbatim in the source · abstract, characters 381–608 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress impaired pollen viability of cotton in field assays.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
heat stresse1
Outcome
pollen viabilitye1
Direction
impairinge1
Setting
Field-based assayse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e1

“Field-based assays revealed that heat stress compromised cotton productivity by impairing pollen viability, reducing chlorophyll biosynthesis and leaf area, and altering biomass partitioning, leading to significant yield losses”

✓ located verbatim in the source · abstract, characters 381–608 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Heat stress led to significant yield losses in cotton in field assays.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
heat stresse1
Outcome
yield lossese1
Direction
decreaseinferrede1
Qualifier
significante1
Setting
Field-based assayse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e1

“Field-based assays revealed that heat stress compromised cotton productivity by impairing pollen viability, reducing chlorophyll biosynthesis and leaf area, and altering biomass partitioning, leading to significant yield losses”

✓ located verbatim in the source · abstract, characters 381–608 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress altered biomass partitioning in cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
heat stresse1
Outcome
biomass partitioninge1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e1

“Field-based assays revealed that heat stress compromised cotton productivity by impairing pollen viability, reducing chlorophyll biosynthesis and leaf area, and altering biomass partitioning, leading to significant yield losses”

✓ located verbatim in the source · abstract, characters 381–608 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress increased lipid peroxidation and osmoregulatory accumulation in cotton under controlled conditions.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
heat stresse2
Outcome
lipid peroxidation and osmoregulatory accumulatione2
Direction
increasede2
Setting
Controlled-environmente2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e2

“Controlled-environment experiments demonstrated that heat stress disrupted oxidative homeostasis and photosynthetic capacity, as evidenced by increased lipid peroxidation and osmoregulatory accumulation, reduced antioxidant enzyme activities, and decreased chlorophyll content”

✓ located verbatim in the source · abstract, characters 610–886 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress reduced antioxidant enzyme activities in cotton under controlled conditions.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
heat stresse2
Outcome
antioxidant enzyme activitiese2
Direction
reducede2
Setting
Controlled-environmente2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e2

“Controlled-environment experiments demonstrated that heat stress disrupted oxidative homeostasis and photosynthetic capacity, as evidenced by increased lipid peroxidation and osmoregulatory accumulation, reduced antioxidant enzyme activities, and decreased chlorophyll content”

✓ located verbatim in the source · abstract, characters 610–886 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat stress decreased chlorophyll content in cotton under controlled conditions.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
heat stresse2
Outcome
chlorophyll contente2
Direction
decreasede2
Setting
Controlled-environmente2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e2

“Controlled-environment experiments demonstrated that heat stress disrupted oxidative homeostasis and photosynthetic capacity, as evidenced by increased lipid peroxidation and osmoregulatory accumulation, reduced antioxidant enzyme activities, and decreased chlorophyll content”

✓ located verbatim in the source · abstract, characters 610–886 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Transcriptome sequencing identified 5211 differentially expressed genes in heat-stressed cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Outcome
differentially expressed genese3
Value
5211e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e3

“Transcriptome sequencing identified 5211 differentially expressed genes, with significant activation of the raffinose metabolic process”

✓ located verbatim in the source · abstract, characters 888–1023 · show in text ↑
Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

The raffinose metabolic process was significantly activated in heat-stressed cotton transcriptomes.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Outcome
raffinose metabolic processe3
Qualifier
significant activatione3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e3

“Transcriptome sequencing identified 5211 differentially expressed genes, with significant activation of the raffinose metabolic process”

✓ located verbatim in the source · abstract, characters 888–1023 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GhRS2 and GhGOLS1 were key upregulated genes under heat stress.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Gene
GhRS2 and GhGOLS1e4
Outcome
key upregulated genese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e4

“GhRS2 and GhGOLS1 emerged as key upregulated genes, corresponding with increased raffinose content”

✓ located verbatim in the source · abstract, characters 1025–1123 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The expression of GhRS2 and GhGOLS1 corresponded with increased raffinose content in cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Gene
GhRS2 and GhGOLS1e4
Compound
raffinosee4
Outcome
raffinose contente4
Direction
increasede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e4

“GhRS2 and GhGOLS1 emerged as key upregulated genes, corresponding with increased raffinose content”

✓ located verbatim in the source · abstract, characters 1025–1123 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Virus-induced silencing of GhRS2 or GhGOLS1 reduced raffinose accumulation in cotton under heat stress.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
virus-induced gene silencinge5
Outcome
raffinose accumulatione5
Direction
reducinge5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e5

“Functional validation via virus-induced gene silencing demonstrated that silencing either gene compromised thermotolerance by reducing raffinose accumulation, impairing antioxidant enzyme activities, and exacerbating oxidative damage”

✓ located verbatim in the source · abstract, characters 1125–1358 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Virus-induced silencing of GhRS2 or GhGOLS1 impaired antioxidant enzyme activities in cotton under heat stress.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
virus-induced gene silencinge5
Outcome
antioxidant enzyme activitiese5
Direction
impairinge5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e5

“Functional validation via virus-induced gene silencing demonstrated that silencing either gene compromised thermotolerance by reducing raffinose accumulation, impairing antioxidant enzyme activities, and exacerbating oxidative damage”

✓ located verbatim in the source · abstract, characters 1125–1358 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Virus-induced silencing of GhRS2 or GhGOLS1 exacerbated oxidative damage in cotton under heat stress.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
virus-induced gene silencinge5
Outcome
oxidative damagee5
Direction
exacerbatinge5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e5

“Functional validation via virus-induced gene silencing demonstrated that silencing either gene compromised thermotolerance by reducing raffinose accumulation, impairing antioxidant enzyme activities, and exacerbating oxidative damage”

✓ located verbatim in the source · abstract, characters 1125–1358 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous raffinose alleviated heat-induced damage in cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
exogenous application of raffinose (20-200 mg/L)e6
Outcome
heat-induced damagee6
Direction
alleviatede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e6

“exogenous application of raffinose (20-200 mg/L) alleviated heat-induced damage by improving leaf water status, enhancing survival rates, and promoting biomass accumulation”

✓ located verbatim in the source · abstract, characters 1373–1545 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous raffinose improved leaf water status of heat-stressed cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
exogenous application of raffinose (20-200 mg/L)e6
Outcome
leaf water statuse6
Direction
improvinge6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e6

“exogenous application of raffinose (20-200 mg/L) alleviated heat-induced damage by improving leaf water status, enhancing survival rates, and promoting biomass accumulation”

✓ located verbatim in the source · abstract, characters 1373–1545 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous raffinose enhanced survival rates of heat-stressed cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
exogenous application of raffinose (20-200 mg/L)e6
Outcome
survival ratese6
Direction
enhancinge6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e6

“exogenous application of raffinose (20-200 mg/L) alleviated heat-induced damage by improving leaf water status, enhancing survival rates, and promoting biomass accumulation”

✓ located verbatim in the source · abstract, characters 1373–1545 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Exogenous raffinose promoted biomass accumulation of heat-stressed cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Treatment
exogenous application of raffinose (20-200 mg/L)e6
Outcome
biomass accumulatione6
Direction
promotinge6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e6

“exogenous application of raffinose (20-200 mg/L) alleviated heat-induced damage by improving leaf water status, enhancing survival rates, and promoting biomass accumulation”

✓ located verbatim in the source · abstract, characters 1373–1545 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The GhRS2/GhGOLS1-mediated raffinose biosynthesis pathway positively regulates thermotolerance in cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Gene
GhRS2/GhGOLS1e7
Compound
raffinosee7
Outcome
thermotolerancee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e7

“GhRS2/GhGOLS1-mediated raffinose biosynthesis pathway positively regulates thermotolerance”

✓ located verbatim in the source · abstract, characters 1637–1727 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

A mechanistic link exists between raffinose metabolism and antioxidant responses under heat stress in cotton.

Taxon
Gossypium hirsutum L.Gossypium hirsutume0
Compound
raffinosee1
Outcome
antioxidant responsese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Gossypium hirsutum
Gossypium hirsutum · TaxonChriKo · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Cotton (Gossypium hirsutum L.) is particularly susceptible to heat stress”

✓ located verbatim in the source · abstract, characters 88–161 · show in text ↑
e1

“reveals a mechanistic link between raffinose metabolism and antioxidant responses under heat stress”

✓ located verbatim in the source · abstract, characters 1733–1832 · show in text ↑

heat · physiology: pigments · Gossypium hirsutum (cotton)Results differ

5 papers: 1 positive, 4 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. negative

1 paper more in this group

See all 5 papers →

heat · physiology: oxidative · Gossypium hirsutum (cotton)Results differ

13 papers: 2 positive, 11 negative or no effect

10 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. positive
  3. positive

9 papers more in this group

See all 13 papers →

heat · yield · Gossypium hirsutum (cotton)Results differ

30 papers: 7 positive, 23 negative or no effect

22 papers in the same direction as this paper · 7 in the opposite direction

  1. negative
  2. positive
  3. positive

26 papers more in this group

See all 30 papers →

heat · growth · Gossypium hirsutum (cotton)Positive and negative results

17 papers: 4 positive, 13 negative or no effect

12 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

13 papers more in this group

See all 17 papers →

loss of function · physiology: oxidative · Gossypium hirsutum (cotton)Positive and negative results

35 papers: 4 positive, 31 negative or no effect

30 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

31 papers more in this group

See all 35 papers →

loss of function · molecular: metabolites · Gossypium hirsutum (cotton)Positive and negative results

40 papers: 8 positive, 32 negative or no effect

31 papers in the same direction as this paper · 8 in the opposite direction

  1. negative
  2. positive
  3. positive

36 papers more in this group

See all 40 papers →

heat · soil: biology · Gossypium hirsutum (cotton)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. negative
See all 2 papers →

loss of function · soil: biology · Gossypium hirsutum (cotton)Results agree

6 papers: 0 positive, 6 negative or no effect

5 papers in the same direction as this paper

  1. negative
  2. negative
  3. negative

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.