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Observationobservedoriginal resultmeasured

Claim · model-written summary

The RgTyDC2 transcript level was consistent with the accumulation pattern of acteoside.

Taxon
Rehmannia glutinosaRehmannia glutinosae0
Gene
RgTyDC2e3
Compound
acteosidee3
Outcome
transcript levele3
Qualifier
consistent with the accumulation patterne3

Verbatim

e0

“Rehmannia glutinosa is an important medicinal plant”

✓ located verbatim in the source · abstract, characters 0–51
e3

“the transcript level of RgTyDC2 was consistent with the accumulation pattern of acteoside in R. glutinosa”

✓ located verbatim in the source · abstract, characters 660–765

Title

Identification and Functional Characterization of Tyrosine Decarboxylase from Rehmannia glutinosa

Yuanjun Li; Yanan Wang; Longyu Huang; et al. Molecules 2022. doi:10.3390/molecules27051634

Other claims from this paper (4)
Associationobservedoriginal resultmeasured

Claim · model-written summary

NnSOD, NnCAT and some NnPOD transcripts followed a pattern similar to enzyme activity.

Taxon
lotusLotust0
Gene
NnSODe0
Outcome
transcript accumulation patterne0
Qualifier
similar transcript accumulation pattern with enzyme activitye0

Not reportedDirection

Verbatim

t0

“lotus (Nelumbo nucifera Gaertn.)”

✓ located after whitespace/quote normalisation · title, characters 35–67
e0

“NnSOD (104590242), NnCAT (104609297), and some NnPOD genes showed a similar transcript accumulation pattern with enzyme activity.”

✓ located verbatim in the source · abstract, characters 1154–1283

Title

Biochemical Mechanism of Fresh-Cut Lotus (Nelumbo nucifera Gaertn.) Root with Exogenous Melatonin Treatment by Multiomics Analysis

Ting Min; Keyan Lu; Jinhui Chen; et al. Foods 2022. doi:10.3390/foods12010044

Other claims from this paper (10)
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

miR828 suppressed MYB12 transcript accumulation in the white tepal region.

Taxon
LilyLiliumt0
Organ / stage
white regione0
Gene
miR828e0
Outcome
MYB12 transcript accumulatione0

Verbatim

e0

“miR828 suppressed MYB12 transcript accumulation in the white region”

✓ located verbatim in the source · abstract, characters 1149–1216
t0

“Lily”

✓ located verbatim in the source · title, characters 84–88

Title

The MicroRNA828/MYB12 Module Mediates Bicolor Pattern Development in Asiatic Hybrid Lily (Lilium spp.) Flowers

Masumi Yamagishi; Moeko Sakai Frontiers in Plant Science 2020. doi:10.3389/fpls.2020.590791

Other claims from this paper (5)
Observationobservedoriginal resultmeasured

Claim · model-written summary

VuLOB shows transcript accumulation in cowpea pulvini.

Taxon
Vigna unguiculataVigna unguiculatat1
Organ / stage
pulvinie2
Gene
VuLOBe2
Outcome
transcript accumulatione2

Verbatim

t1

“Vigna unguiculata (L.) Walp”

✓ located verbatim in the source · title, characters 64–91
e2

“Characterization of the expression pattern of VuLOB shows transcript accumulation in the pulvini”

✓ located verbatim in the source · abstract, characters 1222–1318

Title

Characterization of Leaflet Inclination and LOB-Domain Genes in Vigna unguiculata (L.) Walp

Michael F. Schwartz eScholarship (California Digital Library) 2020

Other claims from this paper (19)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The transcript pattern aligned with changes in melatonin content.

Taxon
chinese cherryt0
Outcome
changes of melatonin contente0
Qualifier
key role in melatonin synthesise0

Verbatim

e0

“in accordance with changes of melatonin content, indicating their key role in melatonin synthesis.”

✓ located verbatim in the source · abstract, characters 621–719
t0

“Daily accumulation of melatonin and gene expression in chinese cherry”

✓ located verbatim in the source · title, characters 0–69

Title

Daily accumulation of melatonin and gene expression in chinese cherry

Xin Wang; Tian Shen; Peng Hu; et al. E3S Web of Conferences 2020. doi:10.1051/e3sconf/202014501029

Other claims from this paper (2)
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

SsNLPs from Sclerotinia sclerotiorum activate CPK4 and CPK11, which phosphorylate WRKY8 and release its inhibition on RLP23 transcript accumulation.

Taxon
PlantsViridiplantaee4
Treatment
SsNLP1 and SsNLP2e0
Interactor
Sclerotinia sclerotiorumSclerotinia sclerotiorume0pathogen
Gene
RLP23e0
Outcome
accumulation of RLP23 transcriptse0

Verbatim

e0

“SsNLP1 and SsNLP2, two nlp24-type PAMPs from the destructive fungal pathogen Sclerotinia sclerotiorum, activate two calcium-elicited kinases, CPK4 and CPK11, which phosphorylate WRKY8 and thus release its inhibition on RLP23 to promote accumulation of RLP23 transcripts”

✓ located verbatim in the source · abstract, characters 528–797
e4

“Plants perceive pathogen-associated molecular patterns (PAMPs) using plasma-membrane-localized pattern recognition receptors (PRRs) to activate broad-spectrum pattern-triggered immunity”

✓ located verbatim in the source · abstract, characters 0–185

Title

Fine-tuning of the dual-role transcription factor WRKY8 via differential phosphorylation for robust broad-spectrum plant immunity

Chun-Xiu Ren; Song-Yu Chen; Yu-Han He; et al. Plant Communications 2024. doi:10.1016/j.xplc.2024.101072

Other claims from this paper (3)
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Transcript levels of polysaccharide-synthesizing enzymes responded barely to cellotriose in Arabidopsis.

Taxon
ArabidopsisArabidopsise2
Treatment
cellotriose treatmentse1
Outcome
transcript levels for polysaccharide-synthesizing enzymese1
Direction
responded barelye1

Not reportedComparator

Verbatim

e1

“The phosphorylation pattern of enzymes involved in hemicellulose or pectin biosynthesis and the transcript levels for polysaccharide-synthesizing enzymes responded barely to cellotriose treatments.”

✓ located verbatim in the source · abstract, characters 1018–1215
e2

“We demonstrate that the phosphorylation pattern of numerous proteins involved in the accumulation of an active cellulose synthase complex in the plasma membrane and those for protein trafficking to and within the trans-Golgi network (TGN) are altered within minutes after cellotriose application to Arabidopsis roots”

✓ located verbatim in the source · abstract, characters 700–1016

Title

The damage-associated molecular pattern cellotriose alters the phosphorylation pattern of proteins involved in cellulose synthesis and trans -Golgi trafficking in Arabidopsis thaliana

Akanksha Gandhi; Yu-Heng Tseng; Ralf Oelmüller Plant Signaling & Behavior 2023. doi:10.1080/15592324.2023.2184352

Other claims from this paper (3)
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Promoters of these genes varied in sequence between varieties and may partly explain expression patterns.

Gene
these genese0
Outcome
unique expression patterne0
Qualifier
might be in part responsiblee0

Verbatim

e0

“The promoter region of these genes has sequence variations among the two rice varieties, which might be in part responsible for their unique expression pattern.”

✓ located verbatim in the source · abstract, characters 1230–1390
t0

“rice”

✓ located verbatim in the source · title, characters 87–91

Title

Variety‐specific transcript accumulation during reproductive stage in drought‐stressed rice

Pratibha Gour; Shivani Kansal; Priyanka Agarwal; et al. Physiologia Plantarum 2021. doi:10.1111/ppl.13585

Other claims from this paper (7)
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Phosphorylation pattern of enzymes for hemicellulose or pectin biosynthesis responded barely to cellotriose.

Taxon
ArabidopsisArabidopsise2
Treatment
cellotriose treatmentse1
Outcome
phosphorylation pattern of enzymes involved in hemicellulose or pectin biosynthesise1
Direction
responded barelye1

Not reportedComparator

Verbatim

e1

“The phosphorylation pattern of enzymes involved in hemicellulose or pectin biosynthesis and the transcript levels for polysaccharide-synthesizing enzymes responded barely to cellotriose treatments.”

✓ located verbatim in the source · abstract, characters 1018–1215
e2

“We demonstrate that the phosphorylation pattern of numerous proteins involved in the accumulation of an active cellulose synthase complex in the plasma membrane and those for protein trafficking to and within the trans-Golgi network (TGN) are altered within minutes after cellotriose application to Arabidopsis roots”

✓ located verbatim in the source · abstract, characters 700–1016

Title

The damage-associated molecular pattern cellotriose alters the phosphorylation pattern of proteins involved in cellulose synthesis and trans -Golgi trafficking in Arabidopsis thaliana

Akanksha Gandhi; Yu-Heng Tseng; Ralf Oelmüller Plant Signaling & Behavior 2023. doi:10.1080/15592324.2023.2184352

Other claims from this paper (3)

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