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“expression changes”

14,265 matchesgrouped into 11 categories
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Associationobservedoriginal resultmeasured

Claim · model-written summary

Presence or absence changes in TF expression were more likely associated with target gene expression changes than quantitative TF expression changes.

Taxon
MaizeZea mayst0
Gene
TFe0
Outcome
changes in target gene expressione0
Direction
more likelye0
Comparator
quantitative changes in TF gene expressione0

Verbatim

e0

“presence/absence changes rather than quantitative changes in TF gene expression are more likely associated with changes in target gene expression”

✓ located verbatim in the source · abstract, characters 905–1050
t0

“Maize”

✓ located verbatim in the source · title, characters 33–38

Title

Meta Gene Regulatory Networks in Maize Highlight Functionally Relevant Regulatory Interactions

Peng Zhou; Zhi Li; Erika Magnusson; et al. The Plant Cell 2020. doi:10.1105/tpc.20.00080

Other claims from this paper (4)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Polyphenol changes aligned with changes in gene expression.

Taxon
kiwifruitActinidia deliciosat0
Outcome
changes in gene expressione0
Qualifier
aligned withe0

Not reportedOrgan / stageDirection

Verbatim

e0

“which aligned with observed changes in gene expression”

✓ located verbatim in the source · abstract, characters 1616–1670
t0

“kiwifruit”

✓ located verbatim in the source · title, characters 49–58

Title

Uncovering the hidden dynamics of pollination in kiwifruit maturity and ripening

Marios Georgios Kollaros; Michail Michailidis; Alexandra Poulouktsi; et al. Postharvest Biology and Technology 2025. doi:10.1016/j.postharvbio.2025.113763

Other claims from this paper (12)
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Summer temperature and photoperiod changes trigger changes in gene expression.

Taxon
Moricandia arvensisMoricandia arvensise1
Outcome
changes in gene expressione0
Qualifier
Changes in temperature and photoperiod in summere0

Verbatim

e0

“Changes in temperature and photoperiod in summer trigger changes in gene expression”

✓ located verbatim in the source · abstract, characters 542–625
e1

“Moricandia arvensis flowers”

✓ located verbatim in the source · abstract, characters 209–236

Title

Within-individual phenotypic plasticity in flowers fosters pollination niche shift

José M. Gómez; Francisco Perfectti; Cristina Armas; et al. Nature Communications 2020. doi:10.1038/s41467-020-17875-1

Other claims from this paper (5)
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

PHE1 and MEA expression changes could not be fully explained by FIS2 expression changes.

Gene
FIS2e0
Outcome
changes of PHE1 and MEA expressione0
Qualifier
could not be fully accounted fore0

Not reportedTaxon

Verbatim

e0

“the changes of PHE1 and MEA expression could not be fully accounted for by the corresponding fluctuations of FIS2 expression”

✓ located verbatim in the source · abstract, characters 1243–1367

Title

Parental Genome Dosage Imbalance Deregulates Imprinting in Arabidopsis

Pauline E. Jullien; Frédéric Berger PLoS Genetics 2010. doi:10.1371/journal.pgen.1000885

Other claims from this paper (2)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer that changes in hypocotyl elongation reflect changes in AtEXPA5 expression.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
AtEXPA5e0
Outcome
hypocotyl elongatione0
Qualifier
reflect changes in AtEXPA5 expressione0

Verbatim

e0

“implying that changes in hypocotyl elongation reflect changes in AtEXPA5 expression”

✓ located verbatim in the source · abstract, characters 557–640
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 50–70

Title

Ethylene negatively regulates EXPA5 expression in Arabidopsis thaliana

Seung‐Hyun Son; Soo Chul Chang; Chan Ho Park; et al. Physiologia Plantarum 2011. doi:10.1111/j.1399-3054.2011.01552.x

Other claims from this paper (9)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Most BR-responsive phosphorylation changes were not driven by gene expression changes.

Taxon
ArabidopsisArabidopsist0
Gene
gene expression changese0
Outcome
phosphorylation changese0

Not reportedDirection

Verbatim

e0

“we found most of phosphorylation changes were not led by gene expression changes.”

✓ located verbatim in the source · abstract, characters 1898–1979
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 112–123

Title

Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis

Li-Ling Lin; Chia-Lang Hsu; Chia-Wei Hu; et al. BMC Genomics 2015. doi:10.1186/s12864-015-1753-4

Other claims from this paper (12)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Changes in star pattern corresponded with gene expression changes.

Taxon
PetuniaPetuniat0
Outcome
gene expressione0
Qualifier
changes in the star patterne0
Comparator
star patterne0

Not reportedGeneOrgan / stageDirection

Verbatim

e0

“These changes in the star pattern corresponded to changes in gene expression.”

✓ located verbatim in the source · abstract, characters 692–769
t0

“Petunia ×hybrida Vilm”

✓ located verbatim in the source · title, characters 40–61

Title

Gene Expression in the Star Mutation of Petunia ×hybrida Vilm

Robert J. Griesbach; Ronald M. Beck; John Hammond; et al. Journal of the American Society for Horticultural Science 2007. doi:10.21273/jashs.132.5.680

Other claims from this paper (4)
Associationobservedoriginal resultmeasured

Claim · model-written summary

ROS content changes during seed imbibition were related to expression pattern changes.

Organ / stage
seede0
Outcome
changes in expression patterne0

Not reportedTaxonDirection

Verbatim

e0

“changes in ROS content during seed imbibition are also related to changes in expression pattern”

✓ located verbatim in the source · abstract, characters 716–811

Title

ROS Signaling in Seed Dormancy Alleviation

Hayat El-Maarouf Bouteau; Claudette Job; Dominique Job; et al. Plant Signaling & Behavior 2007. doi:10.4161/psb.2.5.4460

Other claims from this paper (4)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Changes in amino acid pools correlated with gene expression changes.

Taxon
poplarPopulust0
Gene
these genese0
Outcome
changes in expression profilese0

Not reportedDirection

Verbatim

e0

“which were correlated with the observed changes in expression profiles for these genes”

✓ located verbatim in the source · abstract, characters 687–773
t0

“poplar”

✓ located verbatim in the source · title, characters 75–81

Title

Gene expression associated with N‐induced shifts in resource allocation in poplar

J. E. K. COOKE; K. A. BROWN; R. WU; et al. Plant Cell & Environment 2003. doi:10.1046/j.1365-3040.2003.01012.x

Other claims from this paper (4)
Mechanismauthor interpretationreview summarybasis n/a

Claim · model-written summary

Changes in transcription factor activity may coordinate changes in the expression of a portfolio of genes to direct new developmental programs.

Taxon
plantsViridiplantaet0
Outcome
changes in the expression of a portfolio of genese5
Qualifier
changes in transcription factor activitye5

Verbatim

t0

“Signaling in plants”

✓ located verbatim in the source · title, characters 0–19
e5

“changes in transcription factor activity may coordinate changes in the expression of a portfolio of genes”

✓ located verbatim in the source · abstract, characters 1228–1333

Title

Signaling in plants

R. Michael Mulligan; Joanne Chory; Joseph R. Ecker Proceedings of the National Academy of Sciences 1997. doi:10.1073/pnas.94.7.2793

Observationobservedreview summarybasis n/a

Claim · model-written summary

ABA actions include changes in gene expression.

Outcome
modifications of gene expressione0

Not reportedTaxon

Verbatim

e0

“Other ABA actions involve modifications of gene expression”

✓ located verbatim in the source · abstract, characters 230–288

Title

ABSCISIC ACID SIGNAL TRANSDUCTION

Jeffrey Leung; Jérôme Giraudat Annual Review of Plant Physiology and Plant Molecular Biology 1998. doi:10.1146/annurev.arplant.49.1.199

Other claims from this paper (4)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Differential expression of the catalases is manifested in response to temperature changes.

Taxon
Nicotiana plumbaginifoliaNicotiana plumbaginifoliat0
Treatment
temperature changese1
Outcome
Differential expression of these catalasese1

Not reportedDirection

Verbatim

t0

“Nicotiana plumbaginifolia”

✓ located verbatim in the source · title, characters 45–70
e1

“Differential expression of these catalases is also manifested in response to temperature changes”

✓ located verbatim in the source · abstract, characters 572–668

Title

Differential expression of catalase genes in Nicotiana plumbaginifolia (L.).

H Willekens; C Langebartels; C Tiré; et al. Proceedings of the National Academy of Sciences 1994. doi:10.1073/pnas.91.22.10450

Other claims from this paper (7)
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

Changes in petal physiology from ethylene exposure may result from rapid changes in gene expression.

Outcome
changes in petal physiologye1
Qualifier
rapid changes in gene expressione1

Verbatim

t0

“Carnation Petals”

✓ located verbatim in the source · title, characters 36–52
e1

“changes in petal physiology resulting from exposure to ethylene may be the result of rapid changes in gene expression”

✓ located verbatim in the source · abstract, characters 1451–1568

Title

Ethylene-Induced Gene Expression in Carnation Petals

William R. Woodson; Kay A. Lawton PLANT PHYSIOLOGY 1988. doi:10.1104/pp.87.2.498

Other claims from this paper (9)
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt exposure caused quantitative changes in Prosopis farcta root gene expression.

Taxon
Prosopis farctaProsopis farctat0
Treatment
salte0
Outcome
quantitative changes of gene expressione0
Direction
changese0

Not reportedComparator

Verbatim

e0

“Qualitative as well as quantitative changes of gene expression as induced by salt could be observed”

✓ located verbatim in the source · abstract, characters 1074–1173
t0

“Prosopis farcta”

✓ located verbatim in the source · title, characters 32–47

Title

Salt induced gene expression in Prosopis farcta

I.M. Heimer; A. Golan; Herman Lips Plant Physiol., Suppl.; (United States) 1987

Other claims from this paper (1)
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt exposure caused qualitative changes in Prosopis farcta root gene expression.

Taxon
Prosopis farctaProsopis farctat0
Treatment
salte0
Outcome
Qualitativee0
Direction
changese0

Not reportedComparator

Verbatim

e0

“Qualitative as well as quantitative changes of gene expression as induced by salt could be observed”

✓ located verbatim in the source · abstract, characters 1074–1173
t0

“Prosopis farcta”

✓ located verbatim in the source · title, characters 32–47

Title

Salt induced gene expression in Prosopis farcta

I.M. Heimer; A. Golan; Herman Lips Plant Physiol., Suppl.; (United States) 1987

Other claims from this paper (1)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Quantitative changes in catalase activity during maize development were found not to be mainly due to changes in expression of the catalase inhibitor.

Taxon
maizeZea mayst0
Gene
catalase inhibitore0
Outcome
quantitative changes in catalase activitye0

Verbatim

e0

“the quantitative changes in catalase activity during development are not mainly due to changes in the expression of the catalase inhibitor”

✓ located verbatim in the source · abstract, characters 858–996
t0

“maize catalase”

✓ located verbatim in the source · title, characters 70–84

Title

Evaluation of a catalase inhibitor in the developmental regulation of maize catalase

Athanasios S. Tsaftaris; John C. Sorenson Developmental Genetics 1979. doi:10.1002/dvg.1020010308

Other claims from this paper (1)
Mechanismauthor interpretationreview summarynegativebasis n/a

Claim · model-written summary

Changes in conditions can lead to expression of disease after latent infection.

Taxon
plante1
Outcome
disease is expressede0
Qualifier
conditions changee0

Verbatim

e0

“When conditions change, the disease is expressed”

✓ located verbatim in the source · abstract, characters 741–789
e1

“condition of the plant is recognized as latent or diseased”

✓ located verbatim in the source · abstract, characters 262–320

Title

Latent Infections by Bacteria

A C Hayward Annual Review of Phytopathology 1974. doi:10.1146/annurev.py.12.090174.000511

Other claims from this paper (4)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest habituation arises from heritable changes in gene expression.

Outcome
habituatione0
Qualifier
heritable alterations in the pattern of gene expressione0

Verbatim

e0

“Evidence is presented that suggests that habituation results from heritable alterations in the pattern of gene expression”

✓ located verbatim in the source · abstract, characters 570–691
t0

“Tobacco Pith Cells”

✓ located verbatim in the source · title, characters 15–33

Title

Habituation of Tobacco Pith Cells for Factors Promoting Cell Division Is Heritable and Potentially Reversible

Andrew Binns; Frederick Meins Proceedings of the National Academy of Sciences 1973. doi:10.1073/pnas.70.9.2660

Other claims from this paper (3)
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors proposed gross chromosomal changes as the origin of grass-clumps.

Outcome
induced grass-clumpse0
Qualifier
gross chromosomal changese0

Verbatim

e0

“The induced grass-clumps probably owe their origin to gross chromosomal changes”

✓ located verbatim in the source · abstract, characters 815–894
t0

“Wheat”

✓ located verbatim in the source · title, characters 58–63

Title

Phenotypig Expression of Induced Grass-Clump Character in Wheat Under Different Environments

Mohan Singh Indian Journal of Genetics and Plant Breeding (The) 1966

Other claims from this paper (7)
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Temperature had an important effect on the expression of variegated chlorophyll-deficient mutants in segregating populations.

Treatment
temperaturee0
Outcome
expression of such mutantse0

Not reportedComparatorDirection

Verbatim

t0

“RICE”

✓ located verbatim in the source · title, characters 74–78
e0

“temperature had an important effect on themore» expression of such mutants in the segregating populations”

✓ located after whitespace/quote normalisation · abstract, characters 1213–1319

Title

CYTOLOGICAL AND GENETIC CHANGES INDUCED BY X-RAYS AND THERMAL NEUTRONS IN RICE

Chao Chen; Sha-Sha CHAI OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information) 1961

Other claims from this paper (6)
Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

Low temperature promoted femaleness and depressed maleness.

Outcome
sex expressione0

Not reportedTreatmentComparatorDirection

Verbatim

e0

“changes in sex expression, promoting femaleness and depressing maleness”

✓ located verbatim in the source · abstract, characters 493–564
t0

“Rice”

✓ located verbatim in the source · title, characters 44–48

Title

Studies on the Morphogenic Abnormalities in Rice Spikelets caused by a Low Temperature

Masaharu SHIMIZU; Katsuji KUNO Japanese Journal of Crop Science 1966. doi:10.1626/jcs.35.91

Other claims from this paper (8)
Observationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Bound water percentage, free water percentage and free water per dry matter best expressed species responses to habitat conditions.

Taxon
Prairie Grassest0
Outcome
best expression of the responses of the species to the conditions of their habitatse0

Not reportedDirection

Verbatim

e0

“The bound water percentage, percentage free water, and grams of free water per 100 gm. of dry matter seem to give the best expression of the responses of the species to the conditions of their habitats”

✓ located verbatim in the source · abstract, characters 418–619
t0

“Prairie Grasses”

✓ located verbatim in the source · title, characters 48–63

Title

Seasonal Changes in Bound Water Content of some Prairie Grasses

Warren C. Whitman Botanical Gazette 1941. doi:10.1086/335024

Other claims from this paper (6)
Observationauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Absolute bound water per dry matter was difficult to interpret as a habitat response.

Taxon
Prairie Grassest0
Outcome
absolute amount of bound water present in the plant tissuese0

Not reportedDirection

Verbatim

e0

“The absolute amount of bound water present in the plant tissues, expressed as grams of bound water per 100 gm. of dry matter, did not seem to give an easily interpretable expression of the responses of the species to habitat conditions”

✓ located verbatim in the source · abstract, characters 1012–1247
t0

“Prairie Grasses”

✓ located verbatim in the source · title, characters 48–63

Title

Seasonal Changes in Bound Water Content of some Prairie Grasses

Warren C. Whitman Botanical Gazette 1941. doi:10.1086/335024

Other claims from this paper (6)
Observationobservedoriginal resultmeasured

Claim · model-written summary

The Ed/Ea x M/O expression approached a constant despite temperature variation.

Taxon
Encelia farinosaEncelia farinosat0
Outcome
expression Ed/Ea x M/Oe0
Value
a constante0
Qualifier
external temperature varies as much as 10° F.e0

Verbatim

e0

“Even though the external temperature varies as much as 10° F., the expression Ed/Ea x M/O gives a value which approaches a constant”

✓ located verbatim in the source · abstract, characters 730–861
t0

“Encelia farinosa”

✓ located verbatim in the source · title, characters 55–71

Title

Factors Governing Seasonal Changes in Transpiration of Encelia farinosa

Edith B. Shreve Botanical Gazette 1924. doi:10.1086/333343

Other claims from this paper (10)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Maize inbred strains differed markedly in environmental response.

Taxon
MaizeZea mayst0
Material
inbred strainse0
Outcome
degree to which they were affected by changes in environmente0

Verbatim

t0

“Maize”

✓ located verbatim in the source · title, characters 72–77
e0

“Different inbred strains differed markedly in the degree to which they were affected by changes in environment”

✓ located verbatim in the source · abstract, characters 440–550

Title

Some Factors Affecting the Reversal of Sex Expression in the Tassels of Maize

Frederick D. Richey; George F. Sprague The American Naturalist 1932. doi:10.1086/280449

Other claims from this paper (5)

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