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Observationobservedoriginal resultmeasured

Claim · model-written summary

Each clone had a unique transcript accumulation pattern.

Outcome
unique pattern of transcript accumulatione0

Verbatim

e0

“each clone showed a unique pattern of transcript accumulation”

✓ located verbatim in the source · abstract, characters 344–405
t0

“tobacco”

✓ located after whitespace/quote normalisation · title, characters 139–146

Title

Screening of Wound-Responsive Genes Identifies an Immediate-Early Expressed Gene Encoding a Highly Charged Protein in Mechanically Wounded Tobacco Plants

K. Hara; M. Yagi; N. Koizumi; et al. Plant and Cell Physiology 2000. doi:10.1093/pcp/41.6.684

Other claims from this paper (7)
Observationobservedoriginal resultmeasured

Claim · model-written summary

DcAOX1a and DcAOX2a differed in transcript accumulation but shared a similar co-expression pattern.

Taxon
carrotDaucus carotat0
Gene
DcAOX1a and DcAOX2ae0
Outcome
differential transcript accumulatione0

Verbatim

e0

“DcAOX1a and DcAOX2a indicated a differential transcript accumulation but a similar co-expression pattern.”

✓ located verbatim in the source · abstract, characters 833–938
t0

“carrot”

✓ located verbatim in the source · title, characters 45–51

Title

Differential expression and co‐regulation of carrot AOX genes (Daucus carota)

Maria Doroteia Campos; Hélia Guerra Cardoso; Bettina Linke; et al. Physiologia Plantarum 2009. doi:10.1111/j.1399-3054.2009.01282.x

Other claims from this paper (9)
Associationobservedoriginal resultmeasured

Claim · model-written summary

gus transcript accumulation followed the same pattern as GUS activity.

Gene
guse0
Outcome
gus transcriptse0
Comparator
GUS activitye0

Not reportedDirection

Verbatim

e0

“gus transcripts accumulated in a same pattern with the GUS activity.”

✓ located verbatim in the source · abstract, characters 881–949
t0

“Cotton”

✓ located verbatim in the source · title, characters 73–79

Title

Expression Characteristics of Tobacco Tapetum-Specific Promoter pTA29 in Cotton

Meng Yin 2008

Other claims from this paper (5)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phenylpropanoid pathway genes showed a defined transcript accumulation pattern during latewood formation.

Organ / stage
latewoode0
Gene
genes involved in the phenylpropanoid pathwaye0
Outcome
RNA accumulation patterne0

Not reportedTaxon

Verbatim

e0

“a well-defined RNA accumulation pattern of genes involved in the phenylpropanoid pathway during latewood formation.”

✓ located verbatim in the source · abstract, characters 749–864

Title

Transcript Accumulation Dynamics of Phenylpropanoid Pathway Genes in the Maturing Xylem and Phloem of Picea abies during Latewood Formation

Giovanni Emiliani; Maria Laura Traversi; Monica Anichini; et al. Journal of Integrative Plant Biology 2011. doi:10.1111/j.1744-7909.2011.01069.x

Other claims from this paper (3)
Observationobservedoriginal resultmeasured

Claim · model-written summary

bHLH142 transcript and protein accumulation had temporally different patterns.

Gene
bHLH142e0
Outcome
Temporally dissimilar pattern of bHLH142 transcript and polypeptide accumulatione0

Verbatim

e0

“Temporally dissimilar pattern of bHLH142 transcript and polypeptide accumulation”

✓ located verbatim in the source · abstract, characters 530–610
t0

“rice”

✓ located verbatim in the source · title, characters 112–116

Title

bHLH142 regulates various metabolic pathway-related genes to affect pollen development and anther dehiscence in rice

Rajeev Ranjan; Reema Khurana; Naveen Malik; et al. Scientific Reports 2017. doi:10.1038/srep43397

Other claims from this paper (5)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The pattern of transcript accumulation suggests that PGL apple seedlings alter many physiological and metabolic processes such as sorbitol metabolism, osmoprotectant production and abscisic acid activity.

Material
PGL seedlingse0
Outcome
physiological and metabolic processese0
Qualifier
pattern of transcript accumulation suggestse0

Verbatim

e0

“This pattern of transcript accumulation suggests PGL seedlings alter many physiological and metabolic processes such as sorbitol metabolism, osmoprotectant production, and abscisic acid activity”

✓ located verbatim in the source · abstract, characters 900–1094
t0

“apple”

✓ located verbatim in the source · title, characters 70–75

Title

High-throughput sequencing reveals that pale green lethal disorder in apple (Malus) stimulates stress responses and affects senescence

Benjamin Orcheski; Susan Brown Tree Genetics & Genomes 2016. doi:10.1007/s11295-016-1097-5

Other claims from this paper (2)
Observationobservedoriginal resultmeasured

Claim · model-written summary

General stimuli without HR or cell death produced a more transient Hra32 transcript accumulation pattern.

Taxon
beane0
Treatment
general stimulie0
Gene
Hra32e0
Outcome
Hra32 transcript accumulatione0
Direction
more transiente0

Verbatim

e0

“A more transient pattern of Hra32 transcript accumulation occurred in bean in response to general stimuli that did not result in the HR or host cell death.”

✓ located verbatim in the source · abstract, characters 969–1124

Title

A Bean cDNA Expressed During a Hypersensitive Reaction Encodes a Putative Calcium-Binding Protein

J. L. Jakobek; J. A. Smith-Becker; P. B. Lindgren Molecular Plant-Microbe Interactions 1999. doi:10.1094/mpmi.1999.12.8.712

Other claims from this paper (6)
Associationobservedoriginal resultmeasured

Claim · model-written summary

The similar promoter activity pattern correlated with similar gus transcript accumulation.

Taxon
Nicotiana tabacum and Arabidopsis thalianaArabidopsis thalianaNicotiana tabacume1
Gene
gus transcripte0
Outcome
similar accumulation of gus transcripte0

Not reportedDirection

Verbatim

e0

“which was correlated with a similar accumulation of gus transcript and spore protein content”

✓ located verbatim in the source · abstract, characters 1135–1227
e1

“Nicotiana tabacum and Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 121–163

Title

Differential activation and conserved vegetative cell-specific activity of a late pollen promoter in species with bicellular and tricellular pollen

Colin Eady; Keith Lindsey; David Twell The Plant Journal 1994. doi:10.1046/j.1365-313x.1994.05040543.x

Other claims from this paper (6)
Observationobservedoriginal resultmeasured

Claim · model-written summary

ELIP transcript accumulation in pea followed a different pattern in blue and in red light.

Taxon
Pisum sativumLathyrus oleraceuse0
Outcome
pattern of accumulatione4
Qualifier
in blue and in red lighte4

Verbatim

e0

“in plumulas of etiolated pea plants (Pisum sativum)”

✓ located verbatim in the source · abstract, characters 272–323
e4

“a different pattern of accumulation was obtained in blue and in red light”

✓ located verbatim in the source · abstract, characters 755–828

Title

Regulation of Early Light-Inducible Protein Gene Expression by Blue and Red Light in Etiolated Seedlings Involves Nuclear and Plastid Factors

I. Adamska PLANT PHYSIOLOGY 1995. doi:10.1104/pp.107.4.1167

Other claims from this paper (9)
Observationobservedoriginal resultmeasured

Claim · model-written summary

The RgTyDC2 transcript level was consistent with the accumulation pattern of acteoside.

Taxon
Rehmannia glutinosaRehmannia glutinosae0
Gene
RgTyDC2e3
Compound
acteosidee3
Outcome
transcript levele3
Qualifier
consistent with the accumulation patterne3

Verbatim

e0

“Rehmannia glutinosa is an important medicinal plant”

✓ located verbatim in the source · abstract, characters 0–51
e3

“the transcript level of RgTyDC2 was consistent with the accumulation pattern of acteoside in R. glutinosa”

✓ located verbatim in the source · abstract, characters 660–765

Title

Identification and Functional Characterization of Tyrosine Decarboxylase from Rehmannia glutinosa

Yuanjun Li; Yanan Wang; Longyu Huang; et al. Molecules 2022. doi:10.3390/molecules27051634

Other claims from this paper (4)
Associationobservedoriginal resultmeasured

Claim · model-written summary

NnSOD, NnCAT and some NnPOD transcripts followed a pattern similar to enzyme activity.

Taxon
lotusLotust0
Gene
NnSODe0
Outcome
transcript accumulation patterne0
Qualifier
similar transcript accumulation pattern with enzyme activitye0

Not reportedDirection

Verbatim

t0

“lotus (Nelumbo nucifera Gaertn.)”

✓ located after whitespace/quote normalisation · title, characters 35–67
e0

“NnSOD (104590242), NnCAT (104609297), and some NnPOD genes showed a similar transcript accumulation pattern with enzyme activity.”

✓ located verbatim in the source · abstract, characters 1154–1283

Title

Biochemical Mechanism of Fresh-Cut Lotus (Nelumbo nucifera Gaertn.) Root with Exogenous Melatonin Treatment by Multiomics Analysis

Ting Min; Keyan Lu; Jinhui Chen; et al. Foods 2022. doi:10.3390/foods12010044

Other claims from this paper (10)
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

miR828 suppressed MYB12 transcript accumulation in the white tepal region.

Taxon
LilyLiliumt0
Organ / stage
white regione0
Gene
miR828e0
Outcome
MYB12 transcript accumulatione0

Verbatim

e0

“miR828 suppressed MYB12 transcript accumulation in the white region”

✓ located verbatim in the source · abstract, characters 1149–1216
t0

“Lily”

✓ located verbatim in the source · title, characters 84–88

Title

The MicroRNA828/MYB12 Module Mediates Bicolor Pattern Development in Asiatic Hybrid Lily (Lilium spp.) Flowers

Masumi Yamagishi; Moeko Sakai Frontiers in Plant Science 2020. doi:10.3389/fpls.2020.590791

Other claims from this paper (5)
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Transcript accumulation contributes to a massive change in bean protein synthesis resembling the response to fungal elicitor.

Taxon
beane1
Outcome
overall pattern of protein synthesise0
Qualifier
marked accumulation of the corresponding transcriptse0
Comparator
fungal elicitore0

Not reportedDirection

Verbatim

e0

“marked accumulation of the corresponding transcripts, contributing to a massive change in the overall pattern of protein synthesis which closely resembles that previously observed in response to fungal elicitor”

✓ located verbatim in the source · abstract, characters 504–714
e1

“cells of bean (Phaseolus vulgaris L.)”

✓ located verbatim in the source · abstract, characters 76–113

Title

Glutathione Causes a Massive and Selective Induction of Plant Defense Genes

Vincent P. M. Wingate; Michael A. Lawton; Christopher J. Lamb PLANT PHYSIOLOGY 1988. doi:10.1104/pp.87.1.206

Other claims from this paper (6)

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